RNA–Protein interactions for RNA: ENST00000342216.8

PKN1-202, Transcript of protein kinase N1, humanhuman

TSL 2 BASIC

Gene PKN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-202ENST00000342216 CRCT1Q9UGL9 99 aa4.91□□□□□ -1.62
PKN1-202ENST00000342216 MT1LQ93083 61 aa4.88□□□□□ -1.63
PKN1-202ENST00000342216 SYNE1Q8NF91 8797 aaKnown RBP4.86□□□□□ -1.63
PKN1-202ENST00000342216 OBSCNQ5VST9 7968 aa4.85□□□□□ -1.63
PKN1-202ENST00000342216 KRTAP4-3Q9BYR4 195 aa4.82□□□□□ -1.64
PKN1-202ENST00000342216 MUC12Q9UKN1 5478 aa4.77□□□□□ -1.65
PKN1-202ENST00000342216 MT1EP04732 61 aa4.77□□□□□ -1.65
PKN1-202ENST00000342216 MT1GP13640 62 aa4.77□□□□□ -1.65
PKN1-202ENST00000342216 KRTAP4-9Q9BYQ8 210 aa4.71□□□□□ -1.66
PKN1-202ENST00000342216 KRTAP19-6Q3LI70 58 aa4.64□□□□□ -1.67
PKN1-202ENST00000342216 LCE3BQ5TA77 95 aa4.61□□□□□ -1.67
PKN1-202ENST00000342216 KRTAP9-7A8MTY7 169 aa4.59□□□□□ -1.67
PKN1-202ENST00000342216 KRTAP9-2Q9BYQ4 174 aa4.57□□□□□ -1.68
PKN1-202ENST00000342216 KRTAP19-4Q3LI73 84 aa4.57□□□□□ -1.68
PKN1-202ENST00000342216 PRM1P04553 51 aa4.56□□□□□ -1.68
PKN1-202ENST00000342216 MACF1Q9UPN3 7388 aaKnown RBP4.52□□□□□ -1.69
PKN1-202ENST00000342216 LCE2DQ5TA82 110 aaPredicted RBP4.52□□□□□ -1.69
PKN1-202ENST00000342216 SYNE2Q8WXH0 6885 aaKnown RBP4.46□□□□□ -1.7
PKN1-202ENST00000342216 MT1MQ8N339 61 aa4.43□□□□□ -1.7
PKN1-202ENST00000342216 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
PKN1-202ENST00000342216 KRTAP6-3Q3LI67 103 aa4.4□□□□□ -1.7
PKN1-202ENST00000342216 KRTAP9-6A0A140TA67 174 aa4.37□□□□□ -1.71
PKN1-202ENST00000342216 LCE3DQ9BYE3 92 aa4.37□□□□□ -1.71
PKN1-202ENST00000342216 LCE3EQ5T5B0 92 aa4.34□□□□□ -1.71
PKN1-202ENST00000342216 LCE1AQ5T7P2 110 aa4.33□□□□□ -1.72
PKN1-202ENST00000342216 MDN1Q9NU22 5596 aa4.33□□□□□ -1.72
PKN1-202ENST00000342216 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
PKN1-202ENST00000342216 SPRR2FQ96RM1 72 aa4.3□□□□□ -1.72
PKN1-202ENST00000342216 MT1AP04731 61 aa4.26□□□□□ -1.73
PKN1-202ENST00000342216 KRTAP6-1Q3LI64 71 aa4.23□□□□□ -1.73
PKN1-202ENST00000342216 KRTAP2-2Q9BYT5 123 aa4.21□□□□□ -1.74
PKN1-202ENST00000342216 KRTAP6-2Q3LI66 62 aa4.2□□□□□ -1.74
PKN1-202ENST00000342216 LCE5AQ5TCM9 118 aa4.13□□□□□ -1.75
PKN1-202ENST00000342216 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
PKN1-202ENST00000342216 KRTAP5-9P26371 169 aa3.99□□□□□ -1.77
PKN1-202ENST00000342216 SPRR2EP22531 72 aa3.96□□□□□ -1.78
PKN1-202ENST00000342216 SPRR2BP35325 72 aa3.96□□□□□ -1.78
PKN1-202ENST00000342216 SPRR2AP35326 72 aa3.96□□□□□ -1.78
PKN1-202ENST00000342216 LCE1DQ5T752 114 aa3.9□□□□□ -1.78
PKN1-202ENST00000342216 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.89□□□□□ -1.79
PKN1-202ENST00000342216 SPRR2DP22532 72 aa3.79□□□□□ -1.8
PKN1-202ENST00000342216 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
PKN1-202ENST00000342216 NEBP20929 6669 aa3.65□□□□□ -1.82
PKN1-202ENST00000342216 MT3P25713 68 aa3.56□□□□□ -1.84
PKN1-202ENST00000342216 KRTAP4-11Q9BYQ6 195 aa3.45□□□□□ -1.86
PKN1-202ENST00000342216 MT4P47944 62 aa3.42□□□□□ -1.86
PKN1-202ENST00000342216 KRTAP4-6Q9BYQ5 205 aa3.41□□□□□ -1.86
PKN1-202ENST00000342216 KRTAP5-4Q6L8H1 288 aa3.39□□□□□ -1.87
PKN1-202ENST00000342216 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
PKN1-202ENST00000342216 HMCN1Q96RW7 5635 aa3.34□□□□□ -1.87
PKN1-202ENST00000342216 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
PKN1-202ENST00000342216 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
PKN1-202ENST00000342216 KRTAP20-2Q3LI61 65 aa3.23□□□□□ -1.89
PKN1-202ENST00000342216 LCE4AQ5TA78 99 aa3.21□□□□□ -1.9
PKN1-202ENST00000342216 KRTAP20-1Q3LI63 56 aa3.15□□□□□ -1.91
PKN1-202ENST00000342216 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
PKN1-202ENST00000342216 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
PKN1-202ENST00000342216 KRTAP5-10Q6L8G5 202 aa3.09□□□□□ -1.91
PKN1-202ENST00000342216 KRTAP5-3Q6L8H2 238 aa3.08□□□□□ -1.92
PKN1-202ENST00000342216 KRTAP5-1Q6L8H4 278 aa2.85□□□□□ -1.95
PKN1-202ENST00000342216 KRTAP21-1Q3LI58 79 aa2.79□□□□□ -1.96
PKN1-202ENST00000342216 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
PKN1-202ENST00000342216 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
PKN1-202ENST00000342216 AHNAK2Q8IVF2 5795 aa2.71□□□□□ -1.98
PKN1-202ENST00000342216 KRTAP4-2Q9BYR5 136 aa2.69□□□□□ -1.98
PKN1-202ENST00000342216 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
PKN1-202ENST00000342216 KRTAP5-8O75690 187 aa2.63□□□□□ -1.99
PKN1-202ENST00000342216 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
PKN1-202ENST00000342216 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
PKN1-202ENST00000342216 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
PKN1-202ENST00000342216 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
PKN1-202ENST00000342216 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.02
PKN1-202ENST00000342216 KRTAP9-9Q9BYP9 154 aa2.26□□□□□ -2.05
PKN1-202ENST00000342216 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
PKN1-202ENST00000342216 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
PKN1-202ENST00000342216 AHNAKQ09666 5890 aaKnown RBP1.96□□□□□ -2.1
PKN1-202ENST00000342216 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 137.6 ms