RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 FCGBPQ9Y6R7 5405 aaPredicted RBP4.07□□□□□ -1.76
SSX2IP-201ENST00000342203 KRTAP4-3Q9BYR4 195 aa4.04□□□□□ -1.76
SSX2IP-201ENST00000342203 MT1EP04732 61 aa4.03□□□□□ -1.76
SSX2IP-201ENST00000342203 DSTQ03001 7570 aaKnown RBP4.03□□□□□ -1.76
SSX2IP-201ENST00000342203 KRTAP19-7Q3SYF9 63 aa3.99□□□□□ -1.77
SSX2IP-201ENST00000342203 KRTAP2-3P0C7H8 128 aa3.98□□□□□ -1.77
SSX2IP-201ENST00000342203 KRTAP2-4Q9BYR9 128 aa3.98□□□□□ -1.77
SSX2IP-201ENST00000342203 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
SSX2IP-201ENST00000342203 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
SSX2IP-201ENST00000342203 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
SSX2IP-201ENST00000342203 KRTAP4-9Q9BYQ8 210 aa3.89□□□□□ -1.79
SSX2IP-201ENST00000342203 KRTAP19-3Q7Z4W3 81 aa3.89□□□□□ -1.79
SSX2IP-201ENST00000342203 PRM1P04553 51 aa3.84□□□□□ -1.79
SSX2IP-201ENST00000342203 MT1MQ8N339 61 aa3.84□□□□□ -1.79
SSX2IP-201ENST00000342203 SYNE2Q8WXH0 6885 aaKnown RBP3.75□□□□□ -1.81
SSX2IP-201ENST00000342203 MUC12Q9UKN1 5478 aa3.74□□□□□ -1.81
SSX2IP-201ENST00000342203 SPRR2EP22531 72 aa3.69□□□□□ -1.82
SSX2IP-201ENST00000342203 SPRR2BP35325 72 aa3.69□□□□□ -1.82
SSX2IP-201ENST00000342203 SPRR2AP35326 72 aa3.69□□□□□ -1.82
SSX2IP-201ENST00000342203 SSPOA2VEC9 5147 aa3.68□□□□□ -1.82
SSX2IP-201ENST00000342203 LCE2DQ5TA82 110 aaPredicted RBP3.66□□□□□ -1.82
SSX2IP-201ENST00000342203 LCE2AQ5TA79 106 aaPredicted RBP3.61□□□□□ -1.83
SSX2IP-201ENST00000342203 KRTAP9-7A8MTY7 169 aa3.59□□□□□ -1.84
SSX2IP-201ENST00000342203 KRTAP19-6Q3LI70 58 aa3.59□□□□□ -1.84
SSX2IP-201ENST00000342203 KRTAP6-1Q3LI64 71 aa3.53□□□□□ -1.84
SSX2IP-201ENST00000342203 SPRR2DP22532 72 aa3.51□□□□□ -1.85
SSX2IP-201ENST00000342203 MT1AP04731 61 aa3.49□□□□□ -1.85
SSX2IP-201ENST00000342203 KRTAP9-2Q9BYQ4 174 aa3.49□□□□□ -1.85
SSX2IP-201ENST00000342203 KRTAP6-2Q3LI66 62 aa3.45□□□□□ -1.86
SSX2IP-201ENST00000342203 MT3P25713 68 aa3.45□□□□□ -1.86
SSX2IP-201ENST00000342203 LCE5AQ5TCM9 118 aa3.39□□□□□ -1.87
SSX2IP-201ENST00000342203 MACF1Q9UPN3 7388 aaKnown RBP3.36□□□□□ -1.87
SSX2IP-201ENST00000342203 MDN1Q9NU22 5596 aa3.36□□□□□ -1.87
SSX2IP-201ENST00000342203 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
SSX2IP-201ENST00000342203 MT4P47944 62 aa3.27□□□□□ -1.89
SSX2IP-201ENST00000342203 LCE1DQ5T752 114 aa3.25□□□□□ -1.89
SSX2IP-201ENST00000342203 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
SSX2IP-201ENST00000342203 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
SSX2IP-201ENST00000342203 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
SSX2IP-201ENST00000342203 LCE1AQ5T7P2 110 aa3.17□□□□□ -1.9
SSX2IP-201ENST00000342203 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
SSX2IP-201ENST00000342203 KRTAP9-6A0A140TA67 174 aa3.09□□□□□ -1.91
SSX2IP-201ENST00000342203 KRTAP6-3Q3LI67 103 aa3.01□□□□□ -1.93
SSX2IP-201ENST00000342203 KRTAP4-11Q9BYQ6 195 aa2.91□□□□□ -1.94
SSX2IP-201ENST00000342203 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
SSX2IP-201ENST00000342203 KRTAP4-6Q9BYQ5 205 aa2.79□□□□□ -1.96
SSX2IP-201ENST00000342203 KRTAP5-9P26371 169 aa2.72□□□□□ -1.97
SSX2IP-201ENST00000342203 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.69□□□□□ -1.98
SSX2IP-201ENST00000342203 LCE4AQ5TA78 99 aa2.64□□□□□ -1.99
SSX2IP-201ENST00000342203 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
SSX2IP-201ENST00000342203 KRTAP20-2Q3LI61 65 aa2.58□□□□□ -2
SSX2IP-201ENST00000342203 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
SSX2IP-201ENST00000342203 NEBP20929 6669 aa2.52□□□□□ -2.01
SSX2IP-201ENST00000342203 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
SSX2IP-201ENST00000342203 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
SSX2IP-201ENST00000342203 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
SSX2IP-201ENST00000342203 KRTAP20-1Q3LI63 56 aa2.42□□□□□ -2.02
SSX2IP-201ENST00000342203 KRTAP4-12Q9BQ66 201 aa2.38□□□□□ -2.03
SSX2IP-201ENST00000342203 KRTAP5-4Q6L8H1 288 aa2.36□□□□□ -2.03
SSX2IP-201ENST00000342203 KRTAP4-2Q9BYR5 136 aa2.34□□□□□ -2.04
SSX2IP-201ENST00000342203 KRTAP9-9Q9BYP9 154 aa2.33□□□□□ -2.04
SSX2IP-201ENST00000342203 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
SSX2IP-201ENST00000342203 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
SSX2IP-201ENST00000342203 KRTAP5-3Q6L8H2 238 aa2.12□□□□□ -2.07
SSX2IP-201ENST00000342203 KRTAP5-2Q701N4 177 aa2.1□□□□□ -2.07
SSX2IP-201ENST00000342203 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
SSX2IP-201ENST00000342203 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
SSX2IP-201ENST00000342203 KRTAP5-1Q6L8H4 278 aa1.96□□□□□ -2.1
SSX2IP-201ENST00000342203 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
SSX2IP-201ENST00000342203 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
SSX2IP-201ENST00000342203 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
SSX2IP-201ENST00000342203 KRTAP5-7Q6L8G8 165 aa1.75□□□□□ -2.13
SSX2IP-201ENST00000342203 KRTAP5-11Q6L8G4 156 aa1.75□□□□□ -2.13
SSX2IP-201ENST00000342203 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
SSX2IP-201ENST00000342203 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.69□□□□□ -2.14
SSX2IP-201ENST00000342203 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
SSX2IP-201ENST00000342203 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 5.6 ms