RNA–Protein interactions for RNA: ENST00000342192.8

UBE2L3-201, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2L3, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-201ENST00000342192 KRTAP2-4Q9BYR9 128 aa4.2□□□□□ -1.74
UBE2L3-201ENST00000342192 KRTAP2-1Q9BYU5 128 aa4.2□□□□□ -1.74
UBE2L3-201ENST00000342192 MACF1Q9UPN3 7388 aaKnown RBP4.12□□□□□ -1.75
UBE2L3-201ENST00000342192 KRTAP9-2Q9BYQ4 174 aa4.11□□□□□ -1.75
UBE2L3-201ENST00000342192 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
UBE2L3-201ENST00000342192 SYNE2Q8WXH0 6885 aaKnown RBP4.05□□□□□ -1.76
UBE2L3-201ENST00000342192 KRTAP4-3Q9BYR4 195 aa4.02□□□□□ -1.77
UBE2L3-201ENST00000342192 KRTAP19-3Q7Z4W3 81 aa4□□□□□ -1.77
UBE2L3-201ENST00000342192 MT1MQ8N339 61 aa4□□□□□ -1.77
UBE2L3-201ENST00000342192 LOC100996750A0A140TA64 210 aa3.99□□□□□ -1.77
UBE2L3-201ENST00000342192 MT1GP13640 62 aa3.98□□□□□ -1.77
UBE2L3-201ENST00000342192 CRCT1Q9UGL9 99 aa3.95□□□□□ -1.78
UBE2L3-201ENST00000342192 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
UBE2L3-201ENST00000342192 MDN1Q9NU22 5596 aa3.89□□□□□ -1.79
UBE2L3-201ENST00000342192 DSTQ03001 7570 aaKnown RBP3.88□□□□□ -1.79
UBE2L3-201ENST00000342192 LCE5AQ5TCM9 118 aa3.87□□□□□ -1.79
UBE2L3-201ENST00000342192 SPRR2FQ96RM1 72 aa3.84□□□□□ -1.79
UBE2L3-201ENST00000342192 KRTAP9-6A0A140TA67 174 aa3.7□□□□□ -1.82
UBE2L3-201ENST00000342192 LCE3BQ5TA77 95 aa3.67□□□□□ -1.82
UBE2L3-201ENST00000342192 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.66□□□□□ -1.82
UBE2L3-201ENST00000342192 SYNE1Q8NF91 8797 aaKnown RBP3.65□□□□□ -1.82
UBE2L3-201ENST00000342192 KRTAP5-9P26371 169 aa3.65□□□□□ -1.83
UBE2L3-201ENST00000342192 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
UBE2L3-201ENST00000342192 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
UBE2L3-201ENST00000342192 KRTAP4-9Q9BYQ8 210 aa3.61□□□□□ -1.83
UBE2L3-201ENST00000342192 MT1AP04731 61 aa3.6□□□□□ -1.83
UBE2L3-201ENST00000342192 KRTAP4-6Q9BYQ5 205 aa3.6□□□□□ -1.83
UBE2L3-201ENST00000342192 KRTAP9-7A8MTY7 169 aa3.58□□□□□ -1.84
UBE2L3-201ENST00000342192 PRM1P04553 51 aa3.57□□□□□ -1.84
UBE2L3-201ENST00000342192 SPRR2EP22531 72 aa3.56□□□□□ -1.84
UBE2L3-201ENST00000342192 SPRR2BP35325 72 aa3.56□□□□□ -1.84
UBE2L3-201ENST00000342192 SPRR2AP35326 72 aa3.56□□□□□ -1.84
UBE2L3-201ENST00000342192 KRTAP6-3Q3LI67 103 aa3.56□□□□□ -1.84
UBE2L3-201ENST00000342192 KRTAP5-5Q701N2 237 aaPredicted RBP3.55□□□□□ -1.84
UBE2L3-201ENST00000342192 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
UBE2L3-201ENST00000342192 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
UBE2L3-201ENST00000342192 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
UBE2L3-201ENST00000342192 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.85
UBE2L3-201ENST00000342192 NEBP20929 6669 aa3.45□□□□□ -1.86
UBE2L3-201ENST00000342192 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
UBE2L3-201ENST00000342192 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
UBE2L3-201ENST00000342192 SPRR2DP22532 72 aa3.41□□□□□ -1.86
UBE2L3-201ENST00000342192 KRTAP9-4Q9BYQ2 154 aa3.38□□□□□ -1.87
UBE2L3-201ENST00000342192 KRTAP9-9Q9BYP9 154 aa3.27□□□□□ -1.89
UBE2L3-201ENST00000342192 LCE1DQ5T752 114 aa3.26□□□□□ -1.89
UBE2L3-201ENST00000342192 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
UBE2L3-201ENST00000342192 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
UBE2L3-201ENST00000342192 MT3P25713 68 aa3.22□□□□□ -1.89
UBE2L3-201ENST00000342192 KRTAP5-4Q6L8H1 288 aa3.12□□□□□ -1.91
UBE2L3-201ENST00000342192 MT4P47944 62 aa3.06□□□□□ -1.92
UBE2L3-201ENST00000342192 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
UBE2L3-201ENST00000342192 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
UBE2L3-201ENST00000342192 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
UBE2L3-201ENST00000342192 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
UBE2L3-201ENST00000342192 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
UBE2L3-201ENST00000342192 KRTAP4-12Q9BQ66 201 aa2.89□□□□□ -1.95
UBE2L3-201ENST00000342192 KRTAP5-3Q6L8H2 238 aa2.79□□□□□ -1.96
UBE2L3-201ENST00000342192 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
UBE2L3-201ENST00000342192 KRTAP4-11Q9BYQ6 195 aa2.7□□□□□ -1.98
UBE2L3-201ENST00000342192 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
UBE2L3-201ENST00000342192 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
UBE2L3-201ENST00000342192 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
UBE2L3-201ENST00000342192 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
UBE2L3-201ENST00000342192 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
UBE2L3-201ENST00000342192 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
UBE2L3-201ENST00000342192 GPR98Q8WXG9 6306 aa2.5□□□□□ -2.01
UBE2L3-201ENST00000342192 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
UBE2L3-201ENST00000342192 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
UBE2L3-201ENST00000342192 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.02
UBE2L3-201ENST00000342192 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
UBE2L3-201ENST00000342192 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
UBE2L3-201ENST00000342192 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
UBE2L3-201ENST00000342192 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
UBE2L3-201ENST00000342192 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.06
UBE2L3-201ENST00000342192 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
UBE2L3-201ENST00000342192 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
UBE2L3-201ENST00000342192 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 72.7 ms