RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 LCE3BQ5TA77 95 aa4.56□□□□□ -1.68
TMEM248-201ENST00000341567 SPRR2EP22531 72 aa4.54□□□□□ -1.68
TMEM248-201ENST00000341567 SPRR2BP35325 72 aa4.54□□□□□ -1.68
TMEM248-201ENST00000341567 SPRR2AP35326 72 aa4.54□□□□□ -1.68
TMEM248-201ENST00000341567 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
TMEM248-201ENST00000341567 MT1LQ93083 61 aa4.51□□□□□ -1.69
TMEM248-201ENST00000341567 MT1EP04732 61 aa4.51□□□□□ -1.69
TMEM248-201ENST00000341567 LOC100996750A0A140TA64 210 aa4.48□□□□□ -1.69
TMEM248-201ENST00000341567 MUC12Q9UKN1 5478 aa4.44□□□□□ -1.7
TMEM248-201ENST00000341567 KRTAP19-6Q3LI70 58 aa4.44□□□□□ -1.7
TMEM248-201ENST00000341567 KRTAP19-7Q3SYF9 63 aa4.44□□□□□ -1.7
TMEM248-201ENST00000341567 KRTAP19-3Q7Z4W3 81 aa4.43□□□□□ -1.7
TMEM248-201ENST00000341567 KRTAP9-2Q9BYQ4 174 aa4.42□□□□□ -1.7
TMEM248-201ENST00000341567 KRTAP19-4Q3LI73 84 aa4.37□□□□□ -1.71
TMEM248-201ENST00000341567 SPRR2DP22532 72 aa4.34□□□□□ -1.71
TMEM248-201ENST00000341567 MT1MQ8N339 61 aa4.32□□□□□ -1.72
TMEM248-201ENST00000341567 SSPOA2VEC9 5147 aa4.32□□□□□ -1.72
TMEM248-201ENST00000341567 KRTAP9-6A8MVA2 160 aa4.31□□□□□ -1.72
TMEM248-201ENST00000341567 MACF1Q9UPN3 7388 aaKnown RBP4.25□□□□□ -1.73
TMEM248-201ENST00000341567 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.74
TMEM248-201ENST00000341567 KRTAP2-3P0C7H8 128 aa4.15□□□□□ -1.74
TMEM248-201ENST00000341567 KRTAP2-4Q9BYR9 128 aa4.15□□□□□ -1.74
TMEM248-201ENST00000341567 KRTAP2-1Q9BYU5 128 aa4.15□□□□□ -1.74
TMEM248-201ENST00000341567 KRTAP4-9Q9BYQ8 210 aa4.14□□□□□ -1.75
TMEM248-201ENST00000341567 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
TMEM248-201ENST00000341567 KRTAP9-6A0A140TA67 174 aa4.09□□□□□ -1.75
TMEM248-201ENST00000341567 MT4P47944 62 aa4.04□□□□□ -1.76
TMEM248-201ENST00000341567 PRM1P04553 51 aa4.02□□□□□ -1.77
TMEM248-201ENST00000341567 MUC19Q7Z5P9 8384 aa3.94□□□□□ -1.78
TMEM248-201ENST00000341567 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.94□□□□□ -1.78
TMEM248-201ENST00000341567 LCE5AQ5TCM9 118 aa3.93□□□□□ -1.78
TMEM248-201ENST00000341567 MDN1Q9NU22 5596 aa3.92□□□□□ -1.78
TMEM248-201ENST00000341567 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.78
TMEM248-201ENST00000341567 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.79
TMEM248-201ENST00000341567 KRTAP6-3Q3LI67 103 aa3.86□□□□□ -1.79
TMEM248-201ENST00000341567 MT1AP04731 61 aa3.84□□□□□ -1.79
TMEM248-201ENST00000341567 KRTAP5-9P26371 169 aa3.84□□□□□ -1.79
TMEM248-201ENST00000341567 MT3P25713 68 aa3.83□□□□□ -1.8
TMEM248-201ENST00000341567 KRTAP9-7A8MTY7 169 aa3.79□□□□□ -1.8
TMEM248-201ENST00000341567 LCE1DQ5T752 114 aa3.73□□□□□ -1.81
TMEM248-201ENST00000341567 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
TMEM248-201ENST00000341567 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
TMEM248-201ENST00000341567 KRTAP9-4Q9BYQ2 154 aa3.57□□□□□ -1.84
TMEM248-201ENST00000341567 NEBP20929 6669 aa3.54□□□□□ -1.84
TMEM248-201ENST00000341567 KRTAP20-1Q3LI63 56 aa3.48□□□□□ -1.85
TMEM248-201ENST00000341567 KRTAP4-6Q9BYQ5 205 aa3.43□□□□□ -1.86
TMEM248-201ENST00000341567 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
TMEM248-201ENST00000341567 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
TMEM248-201ENST00000341567 KRTAP5-5Q701N2 237 aaPredicted RBP3.32□□□□□ -1.88
TMEM248-201ENST00000341567 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
TMEM248-201ENST00000341567 KRTAP5-4Q6L8H1 288 aa3.18□□□□□ -1.9
TMEM248-201ENST00000341567 KRTAP20-2Q3LI61 65 aa3.16□□□□□ -1.9
TMEM248-201ENST00000341567 LCE1EQ5T753 118 aa3.15□□□□□ -1.9
TMEM248-201ENST00000341567 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
TMEM248-201ENST00000341567 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.91
TMEM248-201ENST00000341567 KRTAP4-11Q9BYQ6 195 aa3.06□□□□□ -1.92
TMEM248-201ENST00000341567 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
TMEM248-201ENST00000341567 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
TMEM248-201ENST00000341567 KRTAP9-9Q9BYP9 154 aa2.88□□□□□ -1.95
TMEM248-201ENST00000341567 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
TMEM248-201ENST00000341567 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
TMEM248-201ENST00000341567 KRTAP5-3Q6L8H2 238 aa2.85□□□□□ -1.95
TMEM248-201ENST00000341567 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
TMEM248-201ENST00000341567 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
TMEM248-201ENST00000341567 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
TMEM248-201ENST00000341567 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
TMEM248-201ENST00000341567 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
TMEM248-201ENST00000341567 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
TMEM248-201ENST00000341567 KRTAP5-10Q6L8G5 202 aa2.47□□□□□ -2.01
TMEM248-201ENST00000341567 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
TMEM248-201ENST00000341567 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
TMEM248-201ENST00000341567 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
TMEM248-201ENST00000341567 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
TMEM248-201ENST00000341567 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
TMEM248-201ENST00000341567 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
TMEM248-201ENST00000341567 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
TMEM248-201ENST00000341567 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 526.6 ms