RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 KRTAP9-7A8MTY7 169 aa4.17□□□□□ -1.74
CDH5-201ENST00000341529 LCE3BQ5TA77 95 aa4.09□□□□□ -1.76
CDH5-201ENST00000341529 SYNE2Q8WXH0 6885 aaKnown RBP4.06□□□□□ -1.76
CDH5-201ENST00000341529 KRTAP4-3Q9BYR4 195 aa4.03□□□□□ -1.76
CDH5-201ENST00000341529 MT1LQ93083 61 aa4□□□□□ -1.77
CDH5-201ENST00000341529 LOC100996750A0A140TA64 210 aa4□□□□□ -1.77
CDH5-201ENST00000341529 KRTAP9-1A8MXZ3 250 aaPredicted RBP4□□□□□ -1.77
CDH5-201ENST00000341529 SPRR2EP22531 72 aa4□□□□□ -1.77
CDH5-201ENST00000341529 SPRR2BP35325 72 aa4□□□□□ -1.77
CDH5-201ENST00000341529 SPRR2AP35326 72 aa4□□□□□ -1.77
CDH5-201ENST00000341529 MT1EP04732 61 aa3.98□□□□□ -1.77
CDH5-201ENST00000341529 KRTAP12-4P60329 112 aa3.97□□□□□ -1.77
CDH5-201ENST00000341529 MUC12Q9UKN1 5478 aa3.96□□□□□ -1.78
CDH5-201ENST00000341529 KRTAP19-7Q3SYF9 63 aa3.92□□□□□ -1.78
CDH5-201ENST00000341529 SSPOA2VEC9 5147 aa3.89□□□□□ -1.79
CDH5-201ENST00000341529 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
CDH5-201ENST00000341529 KRTAP19-6Q3LI70 58 aa3.87□□□□□ -1.79
CDH5-201ENST00000341529 KRTAP6-3Q3LI67 103 aa3.85□□□□□ -1.79
CDH5-201ENST00000341529 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
CDH5-201ENST00000341529 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.79
CDH5-201ENST00000341529 MACF1Q9UPN3 7388 aaKnown RBP3.83□□□□□ -1.8
CDH5-201ENST00000341529 SPRR2DP22532 72 aa3.81□□□□□ -1.8
CDH5-201ENST00000341529 MT1MQ8N339 61 aa3.81□□□□□ -1.8
CDH5-201ENST00000341529 KRTAP19-4Q3LI73 84 aa3.8□□□□□ -1.8
CDH5-201ENST00000341529 KRTAP4-9Q9BYQ8 210 aa3.74□□□□□ -1.81
CDH5-201ENST00000341529 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
CDH5-201ENST00000341529 KRTAP2-3P0C7H8 128 aa3.67□□□□□ -1.82
CDH5-201ENST00000341529 KRTAP2-4Q9BYR9 128 aa3.67□□□□□ -1.82
CDH5-201ENST00000341529 LCE3EQ5T5B0 92 aa3.62□□□□□ -1.83
CDH5-201ENST00000341529 MT4P47944 62 aa3.58□□□□□ -1.84
CDH5-201ENST00000341529 KRTAP2-1Q9BYU5 128 aa3.58□□□□□ -1.84
CDH5-201ENST00000341529 KRTAP9-9Q9BYP9 154 aa3.52□□□□□ -1.85
CDH5-201ENST00000341529 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
CDH5-201ENST00000341529 MDN1Q9NU22 5596 aa3.52□□□□□ -1.85
CDH5-201ENST00000341529 LCE4AQ5TA78 99 aa3.51□□□□□ -1.85
CDH5-201ENST00000341529 KRTAP2-2Q9BYT5 123 aa3.51□□□□□ -1.85
CDH5-201ENST00000341529 PRM1P04553 51 aa3.47□□□□□ -1.85
CDH5-201ENST00000341529 LCE5AQ5TCM9 118 aa3.46□□□□□ -1.85
CDH5-201ENST00000341529 KRTAP6-1Q3LI64 71 aa3.46□□□□□ -1.86
CDH5-201ENST00000341529 LCE1AQ5T7P2 110 aa3.45□□□□□ -1.86
CDH5-201ENST00000341529 MT1AP04731 61 aa3.4□□□□□ -1.87
CDH5-201ENST00000341529 MT3P25713 68 aa3.38□□□□□ -1.87
CDH5-201ENST00000341529 NEBP20929 6669 aa3.37□□□□□ -1.87
CDH5-201ENST00000341529 KRTAP5-9P26371 169 aa3.3□□□□□ -1.88
CDH5-201ENST00000341529 LCE1DQ5T752 114 aa3.29□□□□□ -1.88
CDH5-201ENST00000341529 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
CDH5-201ENST00000341529 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
CDH5-201ENST00000341529 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
CDH5-201ENST00000341529 GPR98Q8WXG9 6306 aa3.26□□□□□ -1.89
CDH5-201ENST00000341529 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
CDH5-201ENST00000341529 KRTAP4-6Q9BYQ5 205 aa3.05□□□□□ -1.92
CDH5-201ENST00000341529 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
CDH5-201ENST00000341529 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
CDH5-201ENST00000341529 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
CDH5-201ENST00000341529 KRTAP20-2Q3LI61 65 aa2.78□□□□□ -1.96
CDH5-201ENST00000341529 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
CDH5-201ENST00000341529 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
CDH5-201ENST00000341529 KRTAP4-11Q9BYQ6 195 aa2.69□□□□□ -1.98
CDH5-201ENST00000341529 KRTAP5-7Q6L8G8 165 aa2.67□□□□□ -1.98
CDH5-201ENST00000341529 KRTAP5-3Q6L8H2 238 aa2.66□□□□□ -1.98
CDH5-201ENST00000341529 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
CDH5-201ENST00000341529 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
CDH5-201ENST00000341529 LCE1CQ5T751 118 aa2.56□□□□□ -2
CDH5-201ENST00000341529 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
CDH5-201ENST00000341529 KRTAP4-2Q9BYR5 136 aa2.52□□□□□ -2.01
CDH5-201ENST00000341529 AHNAK2Q8IVF2 5795 aa2.5□□□□□ -2.01
CDH5-201ENST00000341529 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
CDH5-201ENST00000341529 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
CDH5-201ENST00000341529 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
CDH5-201ENST00000341529 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
CDH5-201ENST00000341529 KRTAP5-1Q6L8H4 278 aa2.04□□□□□ -2.08
CDH5-201ENST00000341529 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
CDH5-201ENST00000341529 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
CDH5-201ENST00000341529 KRTAP5-11Q6L8G4 156 aa1.77□□□□□ -2.13
CDH5-201ENST00000341529 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.64□□□□□ -2.15
CDH5-201ENST00000341529 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.16
CDH5-201ENST00000341529 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 47.9 ms