RNA–Protein interactions for RNA: ENST00000341165.10

NBR1-201, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBR1, Length 4,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-201ENST00000341165 SPRR2EP22531 72 aa2.73□□□□□ -1.97
NBR1-201ENST00000341165 SPRR2BP35325 72 aa2.73□□□□□ -1.97
NBR1-201ENST00000341165 SPRR2AP35326 72 aa2.73□□□□□ -1.97
NBR1-201ENST00000341165 OBSCNQ5VST9 7968 aa2.72□□□□□ -1.97
NBR1-201ENST00000341165 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
NBR1-201ENST00000341165 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.71□□□□□ -1.98
NBR1-201ENST00000341165 FSIP2Q5CZC0 6907 aa2.69□□□□□ -1.98
NBR1-201ENST00000341165 KRTAP4-7Q9BYR0 210 aa2.67□□□□□ -1.98
NBR1-201ENST00000341165 MT1GP13640 62 aa2.67□□□□□ -1.98
NBR1-201ENST00000341165 SPRR2DP22532 72 aa2.66□□□□□ -1.98
NBR1-201ENST00000341165 KRTAP9-6A8MVA2 160 aa2.65□□□□□ -1.99
NBR1-201ENST00000341165 SSPOA2VEC9 5147 aa2.65□□□□□ -1.99
NBR1-201ENST00000341165 KRTAP19-3Q7Z4W3 81 aa2.64□□□□□ -1.99
NBR1-201ENST00000341165 KRTAP2-3P0C7H8 128 aa2.64□□□□□ -1.99
NBR1-201ENST00000341165 KRTAP2-4Q9BYR9 128 aa2.64□□□□□ -1.99
NBR1-201ENST00000341165 KRTAP2-1Q9BYU5 128 aa2.64□□□□□ -1.99
NBR1-201ENST00000341165 KMT2DO14686 5537 aa2.62□□□□□ -1.99
NBR1-201ENST00000341165 KRTAP6-3Q3LI67 103 aa2.62□□□□□ -1.99
NBR1-201ENST00000341165 MT1MQ8N339 61 aa2.6□□□□□ -1.99
NBR1-201ENST00000341165 LCE3BQ5TA77 95 aa2.56□□□□□ -2
NBR1-201ENST00000341165 SYNE2Q8WXH0 6885 aaKnown RBP2.53□□□□□ -2.01
NBR1-201ENST00000341165 PRM1P04553 51 aa2.52□□□□□ -2.01
NBR1-201ENST00000341165 KRTAP4-3Q9BYR4 195 aa2.51□□□□□ -2.01
NBR1-201ENST00000341165 LCE5AQ5TCM9 118 aa2.51□□□□□ -2.01
NBR1-201ENST00000341165 LOC100996750A0A140TA64 210 aa2.5□□□□□ -2.01
NBR1-201ENST00000341165 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
NBR1-201ENST00000341165 LCE3EQ5T5B0 92 aa2.46□□□□□ -2.02
NBR1-201ENST00000341165 FCGBPQ9Y6R7 5405 aaPredicted RBP2.46□□□□□ -2.02
NBR1-201ENST00000341165 KRTAP2-2Q9BYT5 123 aa2.46□□□□□ -2.02
NBR1-201ENST00000341165 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
NBR1-201ENST00000341165 MT1AP04731 61 aa2.37□□□□□ -2.03
NBR1-201ENST00000341165 LCE1AQ5T7P2 110 aa2.37□□□□□ -2.03
NBR1-201ENST00000341165 KRTAP5-9P26371 169 aa2.37□□□□□ -2.03
NBR1-201ENST00000341165 MUC12Q9UKN1 5478 aa2.36□□□□□ -2.03
NBR1-201ENST00000341165 DSTQ03001 7570 aaKnown RBP2.35□□□□□ -2.03
NBR1-201ENST00000341165 MACF1Q9UPN3 7388 aaKnown RBP2.33□□□□□ -2.04
NBR1-201ENST00000341165 NEBP20929 6669 aa2.32□□□□□ -2.04
NBR1-201ENST00000341165 GPR98Q8WXG9 6306 aa2.32□□□□□ -2.04
NBR1-201ENST00000341165 MT4P47944 62 aa2.32□□□□□ -2.04
NBR1-201ENST00000341165 KRTAP6-1Q3LI64 71 aa2.3□□□□□ -2.04
NBR1-201ENST00000341165 MT3P25713 68 aa2.3□□□□□ -2.04
NBR1-201ENST00000341165 LCE1EQ5T753 118 aa2.27□□□□□ -2.05
NBR1-201ENST00000341165 KRTAP4-9Q9BYQ8 210 aa2.27□□□□□ -2.05
NBR1-201ENST00000341165 KRTAP5-5Q701N2 237 aaPredicted RBP2.23□□□□□ -2.05
NBR1-201ENST00000341165 KRTAP9-4Q9BYQ2 154 aa2.22□□□□□ -2.05
NBR1-201ENST00000341165 LCE4AQ5TA78 99 aa2.2□□□□□ -2.06
NBR1-201ENST00000341165 MDN1Q9NU22 5596 aa2.15□□□□□ -2.07
NBR1-201ENST00000341165 KRTAP6-2Q3LI66 62 aa2.12□□□□□ -2.07
NBR1-201ENST00000341165 LCE1DQ5T752 114 aa2.08□□□□□ -2.08
NBR1-201ENST00000341165 KRTAP5-4Q6L8H1 288 aa2.02□□□□□ -2.09
NBR1-201ENST00000341165 LCE1FQ5T754 118 aa2.02□□□□□ -2.09
NBR1-201ENST00000341165 KRTAP9-9Q9BYP9 154 aa1.97□□□□□ -2.09
NBR1-201ENST00000341165 LCE1BQ5T7P3 118 aa1.95□□□□□ -2.1
NBR1-201ENST00000341165 KRTAP20-2Q3LI61 65 aa1.93□□□□□ -2.1
NBR1-201ENST00000341165 KRTAP4-6Q9BYQ5 205 aa1.92□□□□□ -2.1
NBR1-201ENST00000341165 KRTAP4-11Q9BYQ6 195 aa1.88□□□□□ -2.11
NBR1-201ENST00000341165 KRTAP5-2Q701N4 177 aa1.87□□□□□ -2.11
NBR1-201ENST00000341165 KRTAP5-3Q6L8H2 238 aa1.81□□□□□ -2.12
NBR1-201ENST00000341165 AHNAK2Q8IVF2 5795 aa1.78□□□□□ -2.12
NBR1-201ENST00000341165 HMCN1Q96RW7 5635 aa1.76□□□□□ -2.13
NBR1-201ENST00000341165 LCE1CQ5T751 118 aa1.69□□□□□ -2.14
NBR1-201ENST00000341165 MUC5ACP98088 5654 aa1.64□□□□□ -2.15
NBR1-201ENST00000341165 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
NBR1-201ENST00000341165 KRTAP5-10Q6L8G5 202 aa1.6□□□□□ -2.15
NBR1-201ENST00000341165 KRTAP4-2Q9BYR5 136 aa1.58□□□□□ -2.16
NBR1-201ENST00000341165 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
NBR1-201ENST00000341165 KRTAP5-1Q6L8H4 278 aa1.57□□□□□ -2.16
NBR1-201ENST00000341165 KRTAP5-8O75690 187 aa1.55□□□□□ -2.16
NBR1-201ENST00000341165 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.53□□□□□ -2.16
NBR1-201ENST00000341165 KRTAP4-4Q9BYR3 166 aa1.49□□□□□ -2.17
NBR1-201ENST00000341165 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
NBR1-201ENST00000341165 KRTAP4-12Q9BQ66 201 aa1.45□□□□□ -2.18
NBR1-201ENST00000341165 MUC5BQ9HC84 5762 aaPredicted RBP1.43□□□□□ -2.18
NBR1-201ENST00000341165 KRTAP5-11Q6L8G4 156 aa1.42□□□□□ -2.18
NBR1-201ENST00000341165 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
NBR1-201ENST00000341165 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
NBR1-201ENST00000341165 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 78.3 ms