RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
TRERF1-201ENST00000340840 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
TRERF1-201ENST00000340840 KRTAP4-7Q9BYR0 210 aa3.22□□□□□ -1.89
TRERF1-201ENST00000340840 SPRR2DP22532 72 aa3.21□□□□□ -1.9
TRERF1-201ENST00000340840 KRTAP19-7Q3SYF9 63 aa3.21□□□□□ -1.9
TRERF1-201ENST00000340840 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
TRERF1-201ENST00000340840 MT1LQ93083 61 aa3.2□□□□□ -1.9
TRERF1-201ENST00000340840 KRTAP2-3P0C7H8 128 aa3.18□□□□□ -1.9
TRERF1-201ENST00000340840 KRTAP2-4Q9BYR9 128 aa3.18□□□□□ -1.9
TRERF1-201ENST00000340840 KRTAP2-1Q9BYU5 128 aa3.18□□□□□ -1.9
TRERF1-201ENST00000340840 MT1EP04732 61 aa3.17□□□□□ -1.9
TRERF1-201ENST00000340840 SYNE1Q8NF91 8797 aaKnown RBP3.15□□□□□ -1.91
TRERF1-201ENST00000340840 SSPOA2VEC9 5147 aa3.13□□□□□ -1.91
TRERF1-201ENST00000340840 FCGBPQ9Y6R7 5405 aaPredicted RBP3.12□□□□□ -1.91
TRERF1-201ENST00000340840 KRTAP6-3Q3LI67 103 aa3.11□□□□□ -1.91
TRERF1-201ENST00000340840 MACF1Q9UPN3 7388 aaKnown RBP3.11□□□□□ -1.91
TRERF1-201ENST00000340840 KMT2DO14686 5537 aa3.11□□□□□ -1.91
TRERF1-201ENST00000340840 KRTAP20-1Q3LI63 56 aa3.08□□□□□ -1.92
TRERF1-201ENST00000340840 MT1GP13640 62 aa3.07□□□□□ -1.92
TRERF1-201ENST00000340840 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
TRERF1-201ENST00000340840 DSTQ03001 7570 aaKnown RBP3.01□□□□□ -1.93
TRERF1-201ENST00000340840 KRTAP19-3Q7Z4W3 81 aa3□□□□□ -1.93
TRERF1-201ENST00000340840 LOC100996750A0A140TA64 210 aa2.99□□□□□ -1.93
TRERF1-201ENST00000340840 MT1MQ8N339 61 aa2.98□□□□□ -1.93
TRERF1-201ENST00000340840 KRTAP4-3Q9BYR4 195 aa2.98□□□□□ -1.93
TRERF1-201ENST00000340840 LCE3BQ5TA77 95 aa2.97□□□□□ -1.93
TRERF1-201ENST00000340840 LCE4AQ5TA78 99 aa2.93□□□□□ -1.94
TRERF1-201ENST00000340840 MUC12Q9UKN1 5478 aa2.92□□□□□ -1.94
TRERF1-201ENST00000340840 MT4P47944 62 aa2.89□□□□□ -1.95
TRERF1-201ENST00000340840 NEBP20929 6669 aa2.87□□□□□ -1.95
TRERF1-201ENST00000340840 LCE1AQ5T7P2 110 aa2.86□□□□□ -1.95
TRERF1-201ENST00000340840 KRTAP2-2Q9BYT5 123 aa2.86□□□□□ -1.95
TRERF1-201ENST00000340840 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
TRERF1-201ENST00000340840 MDN1Q9NU22 5596 aa2.8□□□□□ -1.96
TRERF1-201ENST00000340840 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
TRERF1-201ENST00000340840 KRTAP4-9Q9BYQ8 210 aa2.79□□□□□ -1.96
TRERF1-201ENST00000340840 LCE5AQ5TCM9 118 aa2.78□□□□□ -1.96
TRERF1-201ENST00000340840 KRTAP5-9P26371 169 aa2.76□□□□□ -1.97
TRERF1-201ENST00000340840 MT1AP04731 61 aa2.74□□□□□ -1.97
TRERF1-201ENST00000340840 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
TRERF1-201ENST00000340840 KRTAP6-1Q3LI64 71 aa2.69□□□□□ -1.98
TRERF1-201ENST00000340840 KRTAP9-9Q9BYP9 154 aa2.68□□□□□ -1.98
TRERF1-201ENST00000340840 KRTAP9-4Q9BYQ2 154 aa2.68□□□□□ -1.98
TRERF1-201ENST00000340840 PRM1P04553 51 aa2.68□□□□□ -1.98
TRERF1-201ENST00000340840 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
TRERF1-201ENST00000340840 GPR98Q8WXG9 6306 aa2.6□□□□□ -1.99
TRERF1-201ENST00000340840 MT3P25713 68 aa2.56□□□□□ -2
TRERF1-201ENST00000340840 LCE1DQ5T752 114 aa2.53□□□□□ -2
TRERF1-201ENST00000340840 KRTAP6-2Q3LI66 62 aa2.51□□□□□ -2.01
TRERF1-201ENST00000340840 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
TRERF1-201ENST00000340840 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
TRERF1-201ENST00000340840 KRTAP4-6Q9BYQ5 205 aa2.44□□□□□ -2.02
TRERF1-201ENST00000340840 LCE1BQ5T7P3 118 aa2.37□□□□□ -2.03
TRERF1-201ENST00000340840 KRTAP20-2Q3LI61 65 aa2.32□□□□□ -2.04
TRERF1-201ENST00000340840 HMCN1Q96RW7 5635 aa2.22□□□□□ -2.05
TRERF1-201ENST00000340840 KRTAP5-3Q6L8H2 238 aa2.21□□□□□ -2.06
TRERF1-201ENST00000340840 KRTAP5-4Q6L8H1 288 aa2.2□□□□□ -2.06
TRERF1-201ENST00000340840 KRTAP4-11Q9BYQ6 195 aa2.16□□□□□ -2.06
TRERF1-201ENST00000340840 MUC5ACP98088 5654 aa2.08□□□□□ -2.08
TRERF1-201ENST00000340840 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
TRERF1-201ENST00000340840 LCE1CQ5T751 118 aa1.99□□□□□ -2.09
TRERF1-201ENST00000340840 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
TRERF1-201ENST00000340840 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
TRERF1-201ENST00000340840 KRTAP4-12Q9BQ66 201 aa1.96□□□□□ -2.1
TRERF1-201ENST00000340840 KRTAP5-10Q6L8G5 202 aa1.94□□□□□ -2.1
TRERF1-201ENST00000340840 KRTAP4-2Q9BYR5 136 aa1.91□□□□□ -2.1
TRERF1-201ENST00000340840 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
TRERF1-201ENST00000340840 AHNAKQ09666 5890 aaKnown RBP1.85□□□□□ -2.11
TRERF1-201ENST00000340840 KRTAP5-1Q6L8H4 278 aa1.77□□□□□ -2.13
TRERF1-201ENST00000340840 MUC5BQ9HC84 5762 aaPredicted RBP1.76□□□□□ -2.13
TRERF1-201ENST00000340840 KRTAP4-4Q9BYR3 166 aa1.73□□□□□ -2.13
TRERF1-201ENST00000340840 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
TRERF1-201ENST00000340840 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.64□□□□□ -2.15
TRERF1-201ENST00000340840 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
TRERF1-201ENST00000340840 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
TRERF1-201ENST00000340840 KRTAP5-11Q6L8G4 156 aa1.54□□□□□ -2.16
TRERF1-201ENST00000340840 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 42.4 ms