RNA–Protein interactions for RNA: ENST00000340811.8

PKP2-202, Transcript of plakophilin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-202ENST00000340811 KRTAP19-4Q3LI73 84 aa4.35□□□□□ -1.71
PKP2-202ENST00000340811 KRTAP9-6A0A140TA67 174 aa4.32□□□□□ -1.72
PKP2-202ENST00000340811 KRTAP19-6Q3LI70 58 aa4.32□□□□□ -1.72
PKP2-202ENST00000340811 MT1GP13640 62 aa4.32□□□□□ -1.72
PKP2-202ENST00000340811 LCE2DQ5TA82 110 aaPredicted RBP4.32□□□□□ -1.72
PKP2-202ENST00000340811 INE1O15225 51 aa4.3□□□□□ -1.72
PKP2-202ENST00000340811 MUC12Q9UKN1 5478 aa4.26□□□□□ -1.73
PKP2-202ENST00000340811 SYNE2Q8WXH0 6885 aaKnown RBP4.24□□□□□ -1.73
PKP2-202ENST00000340811 SPRR5A0A1B0GTR4 108 aa4.24□□□□□ -1.73
PKP2-202ENST00000340811 MT1EP04732 61 aa4.23□□□□□ -1.73
PKP2-202ENST00000340811 KRTAP19-7Q3SYF9 63 aa4.23□□□□□ -1.73
PKP2-202ENST00000340811 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
PKP2-202ENST00000340811 MT1LQ93083 61 aa4.21□□□□□ -1.74
PKP2-202ENST00000340811 KRTAP19-3Q7Z4W3 81 aa4.21□□□□□ -1.74
PKP2-202ENST00000340811 MACF1Q9UPN3 7388 aaKnown RBP4.18□□□□□ -1.74
PKP2-202ENST00000340811 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
PKP2-202ENST00000340811 LOC100996750A0A140TA64 210 aa4.13□□□□□ -1.75
PKP2-202ENST00000340811 LCE3BQ5TA77 95 aa4.13□□□□□ -1.75
PKP2-202ENST00000340811 KRTAP9-7A8MTY7 169 aa4.07□□□□□ -1.76
PKP2-202ENST00000340811 MT1MQ8N339 61 aa4.03□□□□□ -1.76
PKP2-202ENST00000340811 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
PKP2-202ENST00000340811 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.96□□□□□ -1.78
PKP2-202ENST00000340811 MT4P47944 62 aa3.95□□□□□ -1.78
PKP2-202ENST00000340811 KRTAP6-3Q3LI67 103 aa3.9□□□□□ -1.79
PKP2-202ENST00000340811 MDN1Q9NU22 5596 aa3.85□□□□□ -1.79
PKP2-202ENST00000340811 KRTAP20-1Q3LI63 56 aa3.83□□□□□ -1.8
PKP2-202ENST00000340811 LCE3DQ9BYE3 92 aa3.79□□□□□ -1.8
PKP2-202ENST00000340811 LCE1AQ5T7P2 110 aa3.78□□□□□ -1.8
PKP2-202ENST00000340811 LCE5AQ5TCM9 118 aa3.78□□□□□ -1.8
PKP2-202ENST00000340811 KRTAP4-9Q9BYQ8 210 aa3.74□□□□□ -1.81
PKP2-202ENST00000340811 MT3P25713 68 aa3.74□□□□□ -1.81
PKP2-202ENST00000340811 KRTAP2-3P0C7H8 128 aa3.73□□□□□ -1.81
PKP2-202ENST00000340811 KRTAP2-4Q9BYR9 128 aa3.73□□□□□ -1.81
PKP2-202ENST00000340811 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
PKP2-202ENST00000340811 KRTAP2-1Q9BYU5 128 aa3.65□□□□□ -1.83
PKP2-202ENST00000340811 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
PKP2-202ENST00000340811 MT1AP04731 61 aa3.63□□□□□ -1.83
PKP2-202ENST00000340811 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
PKP2-202ENST00000340811 LCE1DQ5T752 114 aa3.58□□□□□ -1.84
PKP2-202ENST00000340811 LCE1BQ5T7P3 118 aa3.55□□□□□ -1.84
PKP2-202ENST00000340811 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
PKP2-202ENST00000340811 LCE4AQ5TA78 99 aa3.49□□□□□ -1.85
PKP2-202ENST00000340811 NEBP20929 6669 aa3.45□□□□□ -1.86
PKP2-202ENST00000340811 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
PKP2-202ENST00000340811 KRTAP9-4Q9BYQ2 154 aa3.35□□□□□ -1.87
PKP2-202ENST00000340811 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
PKP2-202ENST00000340811 PRM1P04553 51 aa3.28□□□□□ -1.88
PKP2-202ENST00000340811 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
PKP2-202ENST00000340811 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
PKP2-202ENST00000340811 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
PKP2-202ENST00000340811 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
PKP2-202ENST00000340811 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
PKP2-202ENST00000340811 HMCN1Q96RW7 5635 aa2.98□□□□□ -1.93
PKP2-202ENST00000340811 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
PKP2-202ENST00000340811 LCE1EQ5T753 118 aa2.96□□□□□ -1.94
PKP2-202ENST00000340811 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
PKP2-202ENST00000340811 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
PKP2-202ENST00000340811 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
PKP2-202ENST00000340811 KRTAP4-11Q9BYQ6 195 aa2.81□□□□□ -1.96
PKP2-202ENST00000340811 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.98
PKP2-202ENST00000340811 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.99
PKP2-202ENST00000340811 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
PKP2-202ENST00000340811 KRTAP4-2Q9BYR5 136 aa2.63□□□□□ -1.99
PKP2-202ENST00000340811 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
PKP2-202ENST00000340811 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
PKP2-202ENST00000340811 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
PKP2-202ENST00000340811 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
PKP2-202ENST00000340811 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
PKP2-202ENST00000340811 KRTAP5-10Q6L8G5 202 aa2.27□□□□□ -2.05
PKP2-202ENST00000340811 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
PKP2-202ENST00000340811 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
PKP2-202ENST00000340811 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
PKP2-202ENST00000340811 PHGR1C9JFL3 82 aa2□□□□□ -2.09
PKP2-202ENST00000340811 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
PKP2-202ENST00000340811 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.95□□□□□ -2.1
PKP2-202ENST00000340811 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
PKP2-202ENST00000340811 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 98.7 ms