RNA–Protein interactions for RNA: ENST00000339697.4

SERINC1-201, Transcript of serine incorporator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERINC1, Length 3,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERINC1-201ENST00000339697 LCE3BQ5TA77 95 aa3.61□□□□□ -1.83
SERINC1-201ENST00000339697 MT1LQ93083 61 aa3.61□□□□□ -1.83
SERINC1-201ENST00000339697 KRTAP9-9Q9BYP9 154 aa3.6□□□□□ -1.83
SERINC1-201ENST00000339697 KRTAP9-4Q9BYQ2 154 aa3.6□□□□□ -1.83
SERINC1-201ENST00000339697 FCGBPQ9Y6R7 5405 aaPredicted RBP3.58□□□□□ -1.84
SERINC1-201ENST00000339697 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
SERINC1-201ENST00000339697 KRTAP4-7Q9BYR0 210 aa3.53□□□□□ -1.84
SERINC1-201ENST00000339697 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
SERINC1-201ENST00000339697 KRTAP9-7A8MTY7 169 aa3.5□□□□□ -1.85
SERINC1-201ENST00000339697 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
SERINC1-201ENST00000339697 KRTAP2-3P0C7H8 128 aa3.49□□□□□ -1.85
SERINC1-201ENST00000339697 KRTAP2-4Q9BYR9 128 aa3.49□□□□□ -1.85
SERINC1-201ENST00000339697 KRTAP2-1Q9BYU5 128 aa3.49□□□□□ -1.85
SERINC1-201ENST00000339697 MUC12Q9UKN1 5478 aa3.46□□□□□ -1.86
SERINC1-201ENST00000339697 KRTAP19-3Q7Z4W3 81 aa3.46□□□□□ -1.86
SERINC1-201ENST00000339697 LCE5AQ5TCM9 118 aa3.46□□□□□ -1.86
SERINC1-201ENST00000339697 CRCT1Q9UGL9 99 aa3.46□□□□□ -1.86
SERINC1-201ENST00000339697 MT1GP13640 62 aa3.45□□□□□ -1.86
SERINC1-201ENST00000339697 MT1MQ8N339 61 aa3.41□□□□□ -1.86
SERINC1-201ENST00000339697 MACF1Q9UPN3 7388 aaKnown RBP3.4□□□□□ -1.87
SERINC1-201ENST00000339697 LCE1DQ5T752 114 aa3.38□□□□□ -1.87
SERINC1-201ENST00000339697 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
SERINC1-201ENST00000339697 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
SERINC1-201ENST00000339697 KRTAP4-9Q9BYQ8 210 aa3.33□□□□□ -1.88
SERINC1-201ENST00000339697 SYNE2Q8WXH0 6885 aaKnown RBP3.32□□□□□ -1.88
SERINC1-201ENST00000339697 SPRR2FQ96RM1 72 aa3.31□□□□□ -1.88
SERINC1-201ENST00000339697 LCE1AQ5T7P2 110 aa3.3□□□□□ -1.88
SERINC1-201ENST00000339697 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
SERINC1-201ENST00000339697 KRTAP6-3Q3LI67 103 aa3.28□□□□□ -1.88
SERINC1-201ENST00000339697 DSTQ03001 7570 aaKnown RBP3.25□□□□□ -1.89
SERINC1-201ENST00000339697 MDN1Q9NU22 5596 aa3.25□□□□□ -1.89
SERINC1-201ENST00000339697 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
SERINC1-201ENST00000339697 KRTAP5-3Q6L8H2 238 aa3.19□□□□□ -1.9
SERINC1-201ENST00000339697 KRTAP4-11Q9BYQ6 195 aa3.16□□□□□ -1.9
SERINC1-201ENST00000339697 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.91
SERINC1-201ENST00000339697 KRTAP20-1Q3LI63 56 aa3.11□□□□□ -1.91
SERINC1-201ENST00000339697 MT1AP04731 61 aa3.08□□□□□ -1.92
SERINC1-201ENST00000339697 SPRR2EP22531 72 aa3.07□□□□□ -1.92
SERINC1-201ENST00000339697 SPRR2BP35325 72 aa3.07□□□□□ -1.92
SERINC1-201ENST00000339697 SPRR2AP35326 72 aa3.07□□□□□ -1.92
SERINC1-201ENST00000339697 KRTAP5-4Q6L8H1 288 aa3.03□□□□□ -1.92
SERINC1-201ENST00000339697 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
SERINC1-201ENST00000339697 LCE4AQ5TA78 99 aa2.99□□□□□ -1.93
SERINC1-201ENST00000339697 PRM1P04553 51 aa2.99□□□□□ -1.93
SERINC1-201ENST00000339697 KRTAP6-1Q3LI64 71 aa2.99□□□□□ -1.93
SERINC1-201ENST00000339697 SPRR2DP22532 72 aa2.97□□□□□ -1.93
SERINC1-201ENST00000339697 NEBP20929 6669 aa2.97□□□□□ -1.93
SERINC1-201ENST00000339697 SYNE1Q8NF91 8797 aaKnown RBP2.95□□□□□ -1.94
SERINC1-201ENST00000339697 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
SERINC1-201ENST00000339697 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
SERINC1-201ENST00000339697 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
SERINC1-201ENST00000339697 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
SERINC1-201ENST00000339697 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
SERINC1-201ENST00000339697 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
SERINC1-201ENST00000339697 KRTAP5-7Q6L8G8 165 aa2.76□□□□□ -1.97
SERINC1-201ENST00000339697 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
SERINC1-201ENST00000339697 MT3P25713 68 aa2.71□□□□□ -1.98
SERINC1-201ENST00000339697 KRTAP6-2Q3LI66 62 aa2.7□□□□□ -1.98
SERINC1-201ENST00000339697 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
SERINC1-201ENST00000339697 OBSCNQ5VST9 7968 aa2.64□□□□□ -1.99
SERINC1-201ENST00000339697 MT4P47944 62 aa2.59□□□□□ -1.99
SERINC1-201ENST00000339697 LCE1FQ5T754 118 aa2.56□□□□□ -2
SERINC1-201ENST00000339697 KRTAP5-10Q6L8G5 202 aa2.51□□□□□ -2.01
SERINC1-201ENST00000339697 AHNAK2Q8IVF2 5795 aa2.45□□□□□ -2.02
SERINC1-201ENST00000339697 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.33□□□□□ -2.04
SERINC1-201ENST00000339697 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
SERINC1-201ENST00000339697 KRTAP5-1Q6L8H4 278 aa2.32□□□□□ -2.04
SERINC1-201ENST00000339697 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
SERINC1-201ENST00000339697 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
SERINC1-201ENST00000339697 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
SERINC1-201ENST00000339697 KRTAP5-11Q6L8G4 156 aa2.15□□□□□ -2.06
SERINC1-201ENST00000339697 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
SERINC1-201ENST00000339697 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
SERINC1-201ENST00000339697 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
SERINC1-201ENST00000339697 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
SERINC1-201ENST00000339697 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
SERINC1-201ENST00000339697 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 8.6 ms