RNA–Protein interactions for RNA: ENST00000339365.2

SEC24C-201, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC24C, Length 4,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-201ENST00000339365 MT1EP04732 61 aa3.72□□□□□ -1.81
SEC24C-201ENST00000339365 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.72□□□□□ -1.81
SEC24C-201ENST00000339365 KRTAP6-3Q3LI67 103 aa3.71□□□□□ -1.81
SEC24C-201ENST00000339365 MT1LQ93083 61 aa3.68□□□□□ -1.82
SEC24C-201ENST00000339365 INE1O15225 51 aa3.65□□□□□ -1.83
SEC24C-201ENST00000339365 LCE3BQ5TA77 95 aa3.63□□□□□ -1.83
SEC24C-201ENST00000339365 KRTAP20-1Q3LI63 56 aa3.6□□□□□ -1.83
SEC24C-201ENST00000339365 MT1MQ8N339 61 aa3.6□□□□□ -1.83
SEC24C-201ENST00000339365 LCE1AQ5T7P2 110 aa3.57□□□□□ -1.84
SEC24C-201ENST00000339365 SYNE1Q8NF91 8797 aaKnown RBP3.56□□□□□ -1.84
SEC24C-201ENST00000339365 SYNE2Q8WXH0 6885 aaKnown RBP3.55□□□□□ -1.84
SEC24C-201ENST00000339365 KRTAP19-7Q3SYF9 63 aa3.54□□□□□ -1.84
SEC24C-201ENST00000339365 USH2AO75445 5202 aa3.52□□□□□ -1.85
SEC24C-201ENST00000339365 KRTAP2-3P0C7H8 128 aa3.52□□□□□ -1.85
SEC24C-201ENST00000339365 KRTAP2-4Q9BYR9 128 aa3.52□□□□□ -1.85
SEC24C-201ENST00000339365 KRTAP4-7Q9BYR0 210 aa3.51□□□□□ -1.85
SEC24C-201ENST00000339365 MT4P47944 62 aa3.47□□□□□ -1.85
SEC24C-201ENST00000339365 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
SEC24C-201ENST00000339365 KRTAP2-1Q9BYU5 128 aa3.41□□□□□ -1.86
SEC24C-201ENST00000339365 KRTAP4-3Q9BYR4 195 aa3.4□□□□□ -1.86
SEC24C-201ENST00000339365 FCGBPQ9Y6R7 5405 aaPredicted RBP3.36□□□□□ -1.87
SEC24C-201ENST00000339365 LCE5AQ5TCM9 118 aa3.36□□□□□ -1.87
SEC24C-201ENST00000339365 SPRR5A0A1B0GTR4 108 aa3.35□□□□□ -1.87
SEC24C-201ENST00000339365 MT3P25713 68 aa3.34□□□□□ -1.88
SEC24C-201ENST00000339365 LOC100996750A0A140TA64 210 aa3.3□□□□□ -1.88
SEC24C-201ENST00000339365 KRTAP5-9P26371 169 aa3.3□□□□□ -1.88
SEC24C-201ENST00000339365 MACF1Q9UPN3 7388 aaKnown RBP3.29□□□□□ -1.88
SEC24C-201ENST00000339365 LCE4AQ5TA78 99 aa3.29□□□□□ -1.88
SEC24C-201ENST00000339365 SSPOA2VEC9 5147 aa3.29□□□□□ -1.88
SEC24C-201ENST00000339365 MT1AP04731 61 aa3.28□□□□□ -1.88
SEC24C-201ENST00000339365 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
SEC24C-201ENST00000339365 KMT2DO14686 5537 aa3.27□□□□□ -1.89
SEC24C-201ENST00000339365 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
SEC24C-201ENST00000339365 KRTAP4-9Q9BYQ8 210 aa3.18□□□□□ -1.9
SEC24C-201ENST00000339365 NEBP20929 6669 aa3.17□□□□□ -1.9
SEC24C-201ENST00000339365 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
SEC24C-201ENST00000339365 DSTQ03001 7570 aaKnown RBP3.13□□□□□ -1.91
SEC24C-201ENST00000339365 LCE1DQ5T752 114 aa3.08□□□□□ -1.92
SEC24C-201ENST00000339365 KRTAP6-1Q3LI64 71 aa3.06□□□□□ -1.92
SEC24C-201ENST00000339365 MUC12Q9UKN1 5478 aa3.04□□□□□ -1.92
SEC24C-201ENST00000339365 KRTAP9-4Q9BYQ2 154 aa3.03□□□□□ -1.92
SEC24C-201ENST00000339365 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
SEC24C-201ENST00000339365 MDN1Q9NU22 5596 aa3.02□□□□□ -1.93
SEC24C-201ENST00000339365 KRTAP6-2Q3LI66 62 aa3.01□□□□□ -1.93
SEC24C-201ENST00000339365 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
SEC24C-201ENST00000339365 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
SEC24C-201ENST00000339365 KRTAP4-6Q9BYQ5 205 aa2.84□□□□□ -1.96
SEC24C-201ENST00000339365 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
SEC24C-201ENST00000339365 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
SEC24C-201ENST00000339365 KRTAP5-4Q6L8H1 288 aa2.71□□□□□ -1.98
SEC24C-201ENST00000339365 PRM1P04553 51 aa2.71□□□□□ -1.98
SEC24C-201ENST00000339365 KRTAP5-5Q701N2 237 aaPredicted RBP2.59□□□□□ -1.99
SEC24C-201ENST00000339365 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
SEC24C-201ENST00000339365 LCE1CQ5T751 118 aa2.54□□□□□ -2
SEC24C-201ENST00000339365 LCE1EQ5T753 118 aa2.54□□□□□ -2
SEC24C-201ENST00000339365 LCE1FQ5T754 118 aa2.54□□□□□ -2
SEC24C-201ENST00000339365 KRTAP5-3Q6L8H2 238 aa2.52□□□□□ -2.01
SEC24C-201ENST00000339365 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
SEC24C-201ENST00000339365 AHNAK2Q8IVF2 5795 aa2.39□□□□□ -2.03
SEC24C-201ENST00000339365 HMCN1Q96RW7 5635 aa2.38□□□□□ -2.03
SEC24C-201ENST00000339365 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
SEC24C-201ENST00000339365 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
SEC24C-201ENST00000339365 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
SEC24C-201ENST00000339365 KRTAP4-12Q9BQ66 201 aa2.24□□□□□ -2.05
SEC24C-201ENST00000339365 KRTAP4-2Q9BYR5 136 aa2.24□□□□□ -2.05
SEC24C-201ENST00000339365 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
SEC24C-201ENST00000339365 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
SEC24C-201ENST00000339365 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
SEC24C-201ENST00000339365 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.09
SEC24C-201ENST00000339365 KRTAP5-1Q6L8H4 278 aa1.99□□□□□ -2.09
SEC24C-201ENST00000339365 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.11
SEC24C-201ENST00000339365 MUC5BQ9HC84 5762 aaPredicted RBP1.89□□□□□ -2.11
SEC24C-201ENST00000339365 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
SEC24C-201ENST00000339365 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
SEC24C-201ENST00000339365 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
SEC24C-201ENST00000339365 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
SEC24C-201ENST00000339365 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 69.1 ms