RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 MUC12Q9UKN1 5478 aa3.25□□□□□ -1.89
RPGR-202ENST00000339363 FCGBPQ9Y6R7 5405 aaPredicted RBP3.23□□□□□ -1.89
RPGR-202ENST00000339363 SSPOA2VEC9 5147 aa3.23□□□□□ -1.89
RPGR-202ENST00000339363 KRTAP12-4P60329 112 aa3.22□□□□□ -1.89
RPGR-202ENST00000339363 KRTAP2-3P0C7H8 128 aa3.19□□□□□ -1.9
RPGR-202ENST00000339363 KRTAP19-6Q3LI70 58 aa3.19□□□□□ -1.9
RPGR-202ENST00000339363 KRTAP2-4Q9BYR9 128 aa3.19□□□□□ -1.9
RPGR-202ENST00000339363 KRTAP2-1Q9BYU5 128 aa3.19□□□□□ -1.9
RPGR-202ENST00000339363 KRTAP19-7Q3SYF9 63 aa3.18□□□□□ -1.9
RPGR-202ENST00000339363 KRTAP6-3Q3LI67 103 aa3.16□□□□□ -1.9
RPGR-202ENST00000339363 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
RPGR-202ENST00000339363 KRTAP4-3Q9BYR4 195 aa3.11□□□□□ -1.91
RPGR-202ENST00000339363 SYNE1Q8NF91 8797 aaKnown RBP3.09□□□□□ -1.92
RPGR-202ENST00000339363 MT1LQ93083 61 aa3.04□□□□□ -1.92
RPGR-202ENST00000339363 MT1EP04732 61 aa3.01□□□□□ -1.93
RPGR-202ENST00000339363 MT1GP13640 62 aa2.96□□□□□ -1.94
RPGR-202ENST00000339363 KRTAP5-9P26371 169 aa2.96□□□□□ -1.94
RPGR-202ENST00000339363 LCE3BQ5TA77 95 aa2.92□□□□□ -1.94
RPGR-202ENST00000339363 MDN1Q9NU22 5596 aa2.92□□□□□ -1.94
RPGR-202ENST00000339363 SYNE2Q8WXH0 6885 aaKnown RBP2.91□□□□□ -1.94
RPGR-202ENST00000339363 PRM1P04553 51 aa2.9□□□□□ -1.94
RPGR-202ENST00000339363 KRTAP20-1Q3LI63 56 aa2.9□□□□□ -1.95
RPGR-202ENST00000339363 KRTAP4-9Q9BYQ8 210 aa2.89□□□□□ -1.95
RPGR-202ENST00000339363 KRTAP19-4Q3LI73 84 aa2.86□□□□□ -1.95
RPGR-202ENST00000339363 MACF1Q9UPN3 7388 aaKnown RBP2.86□□□□□ -1.95
RPGR-202ENST00000339363 NEBP20929 6669 aa2.85□□□□□ -1.95
RPGR-202ENST00000339363 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
RPGR-202ENST00000339363 MT1MQ8N339 61 aa2.8□□□□□ -1.96
RPGR-202ENST00000339363 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
RPGR-202ENST00000339363 KRTAP9-9Q9BYP9 154 aa2.75□□□□□ -1.97
RPGR-202ENST00000339363 KRTAP9-4Q9BYQ2 154 aa2.75□□□□□ -1.97
RPGR-202ENST00000339363 LCE1AQ5T7P2 110 aa2.75□□□□□ -1.97
RPGR-202ENST00000339363 KRTAP4-12Q9BQ66 201 aa2.75□□□□□ -1.97
RPGR-202ENST00000339363 KRTAP19-3Q7Z4W3 81 aa2.73□□□□□ -1.97
RPGR-202ENST00000339363 KRTAP2-2Q9BYT5 123 aa2.73□□□□□ -1.97
RPGR-202ENST00000339363 SPRR2FQ96RM1 72 aa2.71□□□□□ -1.98
RPGR-202ENST00000339363 KRTAP6-1Q3LI64 71 aa2.66□□□□□ -1.98
RPGR-202ENST00000339363 LCE5AQ5TCM9 118 aa2.66□□□□□ -1.98
RPGR-202ENST00000339363 SPRR2EP22531 72 aa2.63□□□□□ -1.99
RPGR-202ENST00000339363 SPRR2BP35325 72 aa2.63□□□□□ -1.99
RPGR-202ENST00000339363 SPRR2AP35326 72 aa2.63□□□□□ -1.99
RPGR-202ENST00000339363 LCE1EQ5T753 118 aa2.62□□□□□ -1.99
RPGR-202ENST00000339363 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
RPGR-202ENST00000339363 LCE1DQ5T752 114 aa2.61□□□□□ -1.99
RPGR-202ENST00000339363 KRTAP6-2Q3LI66 62 aa2.6□□□□□ -1.99
RPGR-202ENST00000339363 MT1AP04731 61 aa2.58□□□□□ -2
RPGR-202ENST00000339363 SPRR2DP22532 72 aa2.57□□□□□ -2
RPGR-202ENST00000339363 KRTAP4-2Q9BYR5 136 aa2.56□□□□□ -2
RPGR-202ENST00000339363 LCE4AQ5TA78 99 aa2.46□□□□□ -2.02
RPGR-202ENST00000339363 KRTAP4-11Q9BYQ6 195 aa2.44□□□□□ -2.02
RPGR-202ENST00000339363 KRTAP5-3Q6L8H2 238 aa2.43□□□□□ -2.02
RPGR-202ENST00000339363 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
RPGR-202ENST00000339363 KRTAP5-4Q6L8H1 288 aa2.38□□□□□ -2.03
RPGR-202ENST00000339363 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
RPGR-202ENST00000339363 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.04
RPGR-202ENST00000339363 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
RPGR-202ENST00000339363 MT3P25713 68 aa2.27□□□□□ -2.05
RPGR-202ENST00000339363 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
RPGR-202ENST00000339363 MT4P47944 62 aa2.2□□□□□ -2.06
RPGR-202ENST00000339363 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
RPGR-202ENST00000339363 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
RPGR-202ENST00000339363 KRTAP20-2Q3LI61 65 aa2.13□□□□□ -2.07
RPGR-202ENST00000339363 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
RPGR-202ENST00000339363 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
RPGR-202ENST00000339363 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
RPGR-202ENST00000339363 MUC5BQ9HC84 5762 aaPredicted RBP2.05□□□□□ -2.08
RPGR-202ENST00000339363 LCE1BQ5T7P3 118 aa2.02□□□□□ -2.09
RPGR-202ENST00000339363 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
RPGR-202ENST00000339363 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
RPGR-202ENST00000339363 KRTAP5-1Q6L8H4 278 aa1.79□□□□□ -2.12
RPGR-202ENST00000339363 LCE1CQ5T751 118 aa1.76□□□□□ -2.13
RPGR-202ENST00000339363 KRTAP4-4Q9BYR3 166 aa1.72□□□□□ -2.13
RPGR-202ENST00000339363 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
RPGR-202ENST00000339363 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
RPGR-202ENST00000339363 KRTAP5-11Q6L8G4 156 aa1.64□□□□□ -2.15
RPGR-202ENST00000339363 PHGR1C9JFL3 82 aa1.26□□□□□ -2.21
RPGR-202ENST00000339363 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 405.4 ms