RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 KRTAP20-1Q3LI63 56 aa2.15□□□□□ -2.06
PRPF4B-201ENST00000337659 KRTAP2-3P0C7H8 128 aa2.13□□□□□ -2.07
PRPF4B-201ENST00000337659 KRTAP4-12Q9BQ66 201 aa2.13□□□□□ -2.07
PRPF4B-201ENST00000337659 KRTAP2-4Q9BYR9 128 aa2.13□□□□□ -2.07
PRPF4B-201ENST00000337659 MACF1Q9UPN3 7388 aaKnown RBP2.1□□□□□ -2.07
PRPF4B-201ENST00000337659 KRTAP10-7P60409 375 aaPredicted RBP2.08□□□□□ -2.08
PRPF4B-201ENST00000337659 KRTAP9-9Q9BYP9 154 aa2.07□□□□□ -2.08
PRPF4B-201ENST00000337659 KRTAP9-4Q9BYQ2 154 aa2.07□□□□□ -2.08
PRPF4B-201ENST00000337659 KRTAP5-3Q6L8H2 238 aa2.06□□□□□ -2.08
PRPF4B-201ENST00000337659 LCE1AQ5T7P2 110 aa2.05□□□□□ -2.08
PRPF4B-201ENST00000337659 LCE3AQ5TA76 89 aa2.05□□□□□ -2.08
PRPF4B-201ENST00000337659 KRTAP19-7Q3SYF9 63 aa2.04□□□□□ -2.08
PRPF4B-201ENST00000337659 KRTAP2-1Q9BYU5 128 aa2.03□□□□□ -2.08
PRPF4B-201ENST00000337659 KRTAP4-8A0A0G2JLE6 195 aa2□□□□□ -2.09
PRPF4B-201ENST00000337659 LCE1FQ5T754 118 aa2□□□□□ -2.09
PRPF4B-201ENST00000337659 LCE1EQ5T753 118 aa1.99□□□□□ -2.09
PRPF4B-201ENST00000337659 LCE5AQ5TCM9 118 aa1.99□□□□□ -2.09
PRPF4B-201ENST00000337659 FSIP2Q5CZC0 6907 aa1.99□□□□□ -2.09
PRPF4B-201ENST00000337659 MT1EP04732 61 aa1.99□□□□□ -2.09
PRPF4B-201ENST00000337659 SYNE2Q8WXH0 6885 aaKnown RBP1.98□□□□□ -2.09
PRPF4B-201ENST00000337659 KRTAP12-3P60328 96 aa1.97□□□□□ -2.09
PRPF4B-201ENST00000337659 LCE3BQ5TA77 95 aa1.96□□□□□ -2.1
PRPF4B-201ENST00000337659 KRTAP19-5Q3LI72 72 aa1.95□□□□□ -2.1
PRPF4B-201ENST00000337659 MT1LQ93083 61 aa1.94□□□□□ -2.1
PRPF4B-201ENST00000337659 KRTAP4-7Q9BYR0 210 aa1.94□□□□□ -2.1
PRPF4B-201ENST00000337659 KMT2DO14686 5537 aa1.93□□□□□ -2.1
PRPF4B-201ENST00000337659 LCE1DQ5T752 114 aa1.92□□□□□ -2.1
PRPF4B-201ENST00000337659 MUC12Q9UKN1 5478 aa1.92□□□□□ -2.1
PRPF4B-201ENST00000337659 LCE3CQ5T5A8 94 aa1.92□□□□□ -2.1
PRPF4B-201ENST00000337659 KRTAP4-2Q9BYR5 136 aa1.9□□□□□ -2.11
PRPF4B-201ENST00000337659 KRTAP4-9Q9BYQ8 210 aa1.89□□□□□ -2.11
PRPF4B-201ENST00000337659 MDN1Q9NU22 5596 aa1.87□□□□□ -2.11
PRPF4B-201ENST00000337659 LCE4AQ5TA78 99 aa1.87□□□□□ -2.11
PRPF4B-201ENST00000337659 KRTAP19-3Q7Z4W3 81 aa1.87□□□□□ -2.11
PRPF4B-201ENST00000337659 MT1GP13640 62 aa1.87□□□□□ -2.11
PRPF4B-201ENST00000337659 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
PRPF4B-201ENST00000337659 SPRR2EP22531 72 aa1.85□□□□□ -2.11
PRPF4B-201ENST00000337659 SPRR2BP35325 72 aa1.85□□□□□ -2.11
PRPF4B-201ENST00000337659 SPRR2AP35326 72 aa1.85□□□□□ -2.11
PRPF4B-201ENST00000337659 KRTAP5-5Q701N2 237 aaPredicted RBP1.85□□□□□ -2.11
PRPF4B-201ENST00000337659 SPRR2FQ96RM1 72 aa1.84□□□□□ -2.11
PRPF4B-201ENST00000337659 MT1MQ8N339 61 aa1.84□□□□□ -2.11
PRPF4B-201ENST00000337659 KRTAP9-6A8MVA2 160 aa1.83□□□□□ -2.12
PRPF4B-201ENST00000337659 KRTAP5-10Q6L8G5 202 aa1.82□□□□□ -2.12
PRPF4B-201ENST00000337659 KRTAP5-4Q6L8H1 288 aa1.82□□□□□ -2.12
PRPF4B-201ENST00000337659 KRTAP4-11Q9BYQ6 195 aa1.82□□□□□ -2.12
PRPF4B-201ENST00000337659 SPRR2DP22532 72 aa1.81□□□□□ -2.12
PRPF4B-201ENST00000337659 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
PRPF4B-201ENST00000337659 GPR98Q8WXG9 6306 aa1.78□□□□□ -2.12
PRPF4B-201ENST00000337659 AHNAK2Q8IVF2 5795 aa1.73□□□□□ -2.13
PRPF4B-201ENST00000337659 MT1AP04731 61 aa1.68□□□□□ -2.14
PRPF4B-201ENST00000337659 MUC5BQ9HC84 5762 aaPredicted RBP1.66□□□□□ -2.14
PRPF4B-201ENST00000337659 INE1O15225 51 aa1.65□□□□□ -2.14
PRPF4B-201ENST00000337659 KRTAP12-4P60329 112 aa1.65□□□□□ -2.15
PRPF4B-201ENST00000337659 KRTAP4-3Q9BYR4 195 aa1.64□□□□□ -2.15
PRPF4B-201ENST00000337659 AHNAKQ09666 5890 aaKnown RBP1.63□□□□□ -2.15
PRPF4B-201ENST00000337659 KRTAP5-2Q701N4 177 aa1.62□□□□□ -2.15
PRPF4B-201ENST00000337659 LCE3EQ5T5B0 92 aa1.6□□□□□ -2.15
PRPF4B-201ENST00000337659 KRTAP6-1Q3LI64 71 aa1.58□□□□□ -2.16
PRPF4B-201ENST00000337659 KRTAP20-2Q3LI61 65 aa1.57□□□□□ -2.16
PRPF4B-201ENST00000337659 MT4P47944 62 aa1.54□□□□□ -2.16
PRPF4B-201ENST00000337659 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.51□□□□□ -2.17
PRPF4B-201ENST00000337659 LCE1BQ5T7P3 118 aa1.5□□□□□ -2.17
PRPF4B-201ENST00000337659 MUC5ACP98088 5654 aa1.49□□□□□ -2.17
PRPF4B-201ENST00000337659 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
PRPF4B-201ENST00000337659 LCE3DQ9BYE3 92 aa1.47□□□□□ -2.17
PRPF4B-201ENST00000337659 MT3P25713 68 aa1.44□□□□□ -2.18
PRPF4B-201ENST00000337659 KRTAP6-2Q3LI66 62 aa1.4□□□□□ -2.19
PRPF4B-201ENST00000337659 LCE1CQ5T751 118 aa1.37□□□□□ -2.19
PRPF4B-201ENST00000337659 KRTAP5-1Q6L8H4 278 aa1.37□□□□□ -2.19
PRPF4B-201ENST00000337659 PRM1P04553 51 aa1.3□□□□□ -2.2
PRPF4B-201ENST00000337659 KRTAP5-11Q6L8G4 156 aa1.27□□□□□ -2.21
PRPF4B-201ENST00000337659 KRTAP21-2Q3LI59 83 aa1.14□□□□□ -2.23
PRPF4B-201ENST00000337659 KRTAP4-4Q9BYR3 166 aa1.09□□□□□ -2.23
PRPF4B-201ENST00000337659 PHGR1C9JFL3 82 aa0.98□□□□□ -2.25
PRPF4B-201ENST00000337659 KRTAP21-1Q3LI58 79 aa0.97□□□□□ -2.25
PRPF4B-201ENST00000337659 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 12.6 ms