RNA–Protein interactions for RNA: ENST00000336119.7

NLRP3-201, Transcript of NLR family pyrin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP3, Length 4,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-201ENST00000336119 FCGBPQ9Y6R7 5405 aaPredicted RBP3.16□□□□□ -1.9
NLRP3-201ENST00000336119 SPRR2EP22531 72 aa3.16□□□□□ -1.9
NLRP3-201ENST00000336119 SPRR2BP35325 72 aa3.16□□□□□ -1.9
NLRP3-201ENST00000336119 SPRR2AP35326 72 aa3.16□□□□□ -1.9
NLRP3-201ENST00000336119 KRTAP19-7Q3SYF9 63 aa3.15□□□□□ -1.9
NLRP3-201ENST00000336119 KRTAP6-3Q3LI67 103 aa3.14□□□□□ -1.91
NLRP3-201ENST00000336119 KRTAP4-7Q9BYR0 210 aa3.14□□□□□ -1.91
NLRP3-201ENST00000336119 MT1GP13640 62 aa3.13□□□□□ -1.91
NLRP3-201ENST00000336119 MACF1Q9UPN3 7388 aaKnown RBP3.09□□□□□ -1.91
NLRP3-201ENST00000336119 KRTAP19-3Q7Z4W3 81 aa3.08□□□□□ -1.92
NLRP3-201ENST00000336119 SYNE2Q8WXH0 6885 aaKnown RBP3.07□□□□□ -1.92
NLRP3-201ENST00000336119 KMT2DO14686 5537 aa3.07□□□□□ -1.92
NLRP3-201ENST00000336119 SPRR2DP22532 72 aa3.05□□□□□ -1.92
NLRP3-201ENST00000336119 MT1MQ8N339 61 aa3.01□□□□□ -1.93
NLRP3-201ENST00000336119 OBSCNQ5VST9 7968 aa3□□□□□ -1.93
NLRP3-201ENST00000336119 KRTAP9-6A8MVA2 160 aa2.98□□□□□ -1.93
NLRP3-201ENST00000336119 KRTAP20-1Q3LI63 56 aa2.96□□□□□ -1.94
NLRP3-201ENST00000336119 KRTAP2-3P0C7H8 128 aa2.95□□□□□ -1.94
NLRP3-201ENST00000336119 KRTAP4-3Q9BYR4 195 aa2.95□□□□□ -1.94
NLRP3-201ENST00000336119 KRTAP2-4Q9BYR9 128 aa2.95□□□□□ -1.94
NLRP3-201ENST00000336119 KRTAP2-1Q9BYU5 128 aa2.95□□□□□ -1.94
NLRP3-201ENST00000336119 LOC100996750A0A140TA64 210 aa2.93□□□□□ -1.94
NLRP3-201ENST00000336119 SYNE1Q8NF91 8797 aaKnown RBP2.92□□□□□ -1.94
NLRP3-201ENST00000336119 LCE3BQ5TA77 95 aa2.91□□□□□ -1.94
NLRP3-201ENST00000336119 KRTAP5-9P26371 169 aa2.91□□□□□ -1.94
NLRP3-201ENST00000336119 KRTAP12-4P60329 112 aa2.89□□□□□ -1.95
NLRP3-201ENST00000336119 LCE1AQ5T7P2 110 aa2.89□□□□□ -1.95
NLRP3-201ENST00000336119 DSTQ03001 7570 aaKnown RBP2.86□□□□□ -1.95
NLRP3-201ENST00000336119 NEBP20929 6669 aa2.83□□□□□ -1.96
NLRP3-201ENST00000336119 LCE5AQ5TCM9 118 aa2.82□□□□□ -1.96
NLRP3-201ENST00000336119 KRTAP2-2Q9BYT5 123 aa2.81□□□□□ -1.96
NLRP3-201ENST00000336119 MUC12Q9UKN1 5478 aa2.79□□□□□ -1.96
NLRP3-201ENST00000336119 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
NLRP3-201ENST00000336119 MDN1Q9NU22 5596 aa2.77□□□□□ -1.97
NLRP3-201ENST00000336119 MT1AP04731 61 aa2.75□□□□□ -1.97
NLRP3-201ENST00000336119 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
NLRP3-201ENST00000336119 MT4P47944 62 aa2.68□□□□□ -1.98
NLRP3-201ENST00000336119 KRTAP6-1Q3LI64 71 aa2.67□□□□□ -1.98
NLRP3-201ENST00000336119 KRTAP4-9Q9BYQ8 210 aa2.64□□□□□ -1.99
NLRP3-201ENST00000336119 MT3P25713 68 aa2.64□□□□□ -1.99
NLRP3-201ENST00000336119 LCE4AQ5TA78 99 aa2.59□□□□□ -1.99
NLRP3-201ENST00000336119 KRTAP9-4Q9BYQ2 154 aa2.56□□□□□ -2
NLRP3-201ENST00000336119 PRM1P04553 51 aa2.52□□□□□ -2.01
NLRP3-201ENST00000336119 GPR98Q8WXG9 6306 aa2.51□□□□□ -2.01
NLRP3-201ENST00000336119 LCE1DQ5T752 114 aa2.49□□□□□ -2.01
NLRP3-201ENST00000336119 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
NLRP3-201ENST00000336119 KRTAP4-6Q9BYQ5 205 aa2.41□□□□□ -2.02
NLRP3-201ENST00000336119 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
NLRP3-201ENST00000336119 KRTAP20-2Q3LI61 65 aa2.34□□□□□ -2.04
NLRP3-201ENST00000336119 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
NLRP3-201ENST00000336119 KRTAP5-4Q6L8H1 288 aa2.31□□□□□ -2.04
NLRP3-201ENST00000336119 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
NLRP3-201ENST00000336119 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
NLRP3-201ENST00000336119 KRTAP5-3Q6L8H2 238 aa2.19□□□□□ -2.06
NLRP3-201ENST00000336119 KRTAP4-11Q9BYQ6 195 aa2.13□□□□□ -2.07
NLRP3-201ENST00000336119 AHNAK2Q8IVF2 5795 aa2.1□□□□□ -2.07
NLRP3-201ENST00000336119 KRTAP9-9Q9BYP9 154 aa2.09□□□□□ -2.08
NLRP3-201ENST00000336119 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.08
NLRP3-201ENST00000336119 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.08
NLRP3-201ENST00000336119 LCE1EQ5T753 118 aa1.99□□□□□ -2.09
NLRP3-201ENST00000336119 LCE1CQ5T751 118 aa1.99□□□□□ -2.09
NLRP3-201ENST00000336119 LCE1FQ5T754 118 aa1.99□□□□□ -2.09
NLRP3-201ENST00000336119 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
NLRP3-201ENST00000336119 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
NLRP3-201ENST00000336119 MUC5ACP98088 5654 aa1.9□□□□□ -2.11
NLRP3-201ENST00000336119 KRTAP5-1Q6L8H4 278 aa1.81□□□□□ -2.12
NLRP3-201ENST00000336119 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
NLRP3-201ENST00000336119 KRTAP4-2Q9BYR5 136 aa1.75□□□□□ -2.13
NLRP3-201ENST00000336119 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
NLRP3-201ENST00000336119 KRTAP4-12Q9BQ66 201 aa1.74□□□□□ -2.13
NLRP3-201ENST00000336119 KRTAP4-4Q9BYR3 166 aa1.69□□□□□ -2.14
NLRP3-201ENST00000336119 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.61□□□□□ -2.15
NLRP3-201ENST00000336119 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
NLRP3-201ENST00000336119 KRTAP5-11Q6L8G4 156 aa1.57□□□□□ -2.16
NLRP3-201ENST00000336119 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
NLRP3-201ENST00000336119 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
NLRP3-201ENST00000336119 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 42.2 ms