RNA–Protein interactions for RNA: ENST00000336053.10

HNRNPC-201, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2 BASIC

Gene HNRNPC, Length 3,301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-201ENST00000336053 KRTAP19-7Q3SYF9 63 aa2.88□□□□□ -1.95
HNRNPC-201ENST00000336053 FSIP2Q5CZC0 6907 aa2.88□□□□□ -1.95
HNRNPC-201ENST00000336053 MT1GP13640 62 aa2.87□□□□□ -1.95
HNRNPC-201ENST00000336053 KRTAP4-3Q9BYR4 195 aa2.86□□□□□ -1.95
HNRNPC-201ENST00000336053 MT1LQ93083 61 aa2.85□□□□□ -1.95
HNRNPC-201ENST00000336053 KRTAP4-9Q9BYQ8 210 aa2.83□□□□□ -1.96
HNRNPC-201ENST00000336053 LCE3BQ5TA77 95 aa2.81□□□□□ -1.96
HNRNPC-201ENST00000336053 KRTAP19-4Q3LI73 84 aa2.79□□□□□ -1.96
HNRNPC-201ENST00000336053 MT1EP04732 61 aa2.78□□□□□ -1.97
HNRNPC-201ENST00000336053 LCE2AQ5TA79 106 aaPredicted RBP2.78□□□□□ -1.97
HNRNPC-201ENST00000336053 MUC12Q9UKN1 5478 aa2.77□□□□□ -1.97
HNRNPC-201ENST00000336053 PRM1P04553 51 aa2.75□□□□□ -1.97
HNRNPC-201ENST00000336053 KRTAP4-6Q9BYQ5 205 aa2.73□□□□□ -1.97
HNRNPC-201ENST00000336053 KRTAP9-7A8MTY7 169 aa2.72□□□□□ -1.97
HNRNPC-201ENST00000336053 SSPOA2VEC9 5147 aa2.68□□□□□ -1.98
HNRNPC-201ENST00000336053 KRTAP9-2Q9BYQ4 174 aa2.66□□□□□ -1.98
HNRNPC-201ENST00000336053 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.98
HNRNPC-201ENST00000336053 SYNE2Q8WXH0 6885 aaKnown RBP2.63□□□□□ -1.99
HNRNPC-201ENST00000336053 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
HNRNPC-201ENST00000336053 MT1MQ8N339 61 aa2.6□□□□□ -1.99
HNRNPC-201ENST00000336053 HMCN1Q96RW7 5635 aa2.59□□□□□ -1.99
HNRNPC-201ENST00000336053 KRTAP19-6Q3LI70 58 aa2.58□□□□□ -2
HNRNPC-201ENST00000336053 LCE1AQ5T7P2 110 aa2.57□□□□□ -2
HNRNPC-201ENST00000336053 KRTAP6-3Q3LI67 103 aa2.55□□□□□ -2
HNRNPC-201ENST00000336053 KRTAP19-3Q7Z4W3 81 aa2.54□□□□□ -2
HNRNPC-201ENST00000336053 KRTAP9-6A0A140TA67 174 aa2.53□□□□□ -2
HNRNPC-201ENST00000336053 KRTAP5-5Q701N2 237 aaPredicted RBP2.52□□□□□ -2.01
HNRNPC-201ENST00000336053 KRTAP6-2Q3LI66 62 aa2.49□□□□□ -2.01
HNRNPC-201ENST00000336053 KRTAP6-1Q3LI64 71 aa2.48□□□□□ -2.01
HNRNPC-201ENST00000336053 SPRR2FQ96RM1 72 aa2.47□□□□□ -2.01
HNRNPC-201ENST00000336053 LCE1EQ5T753 118 aa2.46□□□□□ -2.02
HNRNPC-201ENST00000336053 MT1AP04731 61 aa2.45□□□□□ -2.02
HNRNPC-201ENST00000336053 LCE5AQ5TCM9 118 aa2.44□□□□□ -2.02
HNRNPC-201ENST00000336053 KRTAP2-2Q9BYT5 123 aa2.4□□□□□ -2.02
HNRNPC-201ENST00000336053 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
HNRNPC-201ENST00000336053 LCE1DQ5T752 114 aa2.32□□□□□ -2.04
HNRNPC-201ENST00000336053 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.31□□□□□ -2.04
HNRNPC-201ENST00000336053 MDN1Q9NU22 5596 aa2.3□□□□□ -2.04
HNRNPC-201ENST00000336053 KRTAP4-12Q9BQ66 201 aa2.29□□□□□ -2.04
HNRNPC-201ENST00000336053 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
HNRNPC-201ENST00000336053 MACF1Q9UPN3 7388 aaKnown RBP2.26□□□□□ -2.05
HNRNPC-201ENST00000336053 KRTAP9-9Q9BYP9 154 aa2.22□□□□□ -2.05
HNRNPC-201ENST00000336053 KRTAP9-4Q9BYQ2 154 aa2.22□□□□□ -2.05
HNRNPC-201ENST00000336053 KRTAP5-9P26371 169 aa2.18□□□□□ -2.06
HNRNPC-201ENST00000336053 MT3P25713 68 aa2.16□□□□□ -2.06
HNRNPC-201ENST00000336053 LCE4AQ5TA78 99 aa2.1□□□□□ -2.07
HNRNPC-201ENST00000336053 SPRR2EP22531 72 aa2.1□□□□□ -2.07
HNRNPC-201ENST00000336053 KRTAP4-11Q9BYQ6 195 aa2.09□□□□□ -2.07
HNRNPC-201ENST00000336053 SPRR2BP35325 72 aa2.09□□□□□ -2.07
HNRNPC-201ENST00000336053 SPRR2AP35326 72 aa2.09□□□□□ -2.07
HNRNPC-201ENST00000336053 KRTAP4-2Q9BYR5 136 aa2.09□□□□□ -2.08
HNRNPC-201ENST00000336053 SPRR2DP22532 72 aa2.03□□□□□ -2.08
HNRNPC-201ENST00000336053 KRTAP5-3Q6L8H2 238 aa2.03□□□□□ -2.08
HNRNPC-201ENST00000336053 LCE1FQ5T754 118 aa1.98□□□□□ -2.09
HNRNPC-201ENST00000336053 KRTAP5-4Q6L8H1 288 aa1.95□□□□□ -2.1
HNRNPC-201ENST00000336053 LCE1BQ5T7P3 118 aa1.93□□□□□ -2.1
HNRNPC-201ENST00000336053 MUC5ACP98088 5654 aa1.91□□□□□ -2.1
HNRNPC-201ENST00000336053 MT4P47944 62 aa1.89□□□□□ -2.11
HNRNPC-201ENST00000336053 KRTAP5-2Q701N4 177 aa1.86□□□□□ -2.11
HNRNPC-201ENST00000336053 KRTAP20-2Q3LI61 65 aa1.78□□□□□ -2.13
HNRNPC-201ENST00000336053 KRTAP5-10Q6L8G5 202 aa1.76□□□□□ -2.13
HNRNPC-201ENST00000336053 NEBP20929 6669 aa1.76□□□□□ -2.13
HNRNPC-201ENST00000336053 KRTAP20-1Q3LI63 56 aa1.72□□□□□ -2.13
HNRNPC-201ENST00000336053 KRTAP5-1Q6L8H4 278 aa1.71□□□□□ -2.14
HNRNPC-201ENST00000336053 KRTAP4-4Q9BYR3 166 aa1.68□□□□□ -2.14
HNRNPC-201ENST00000336053 GPR98Q8WXG9 6306 aa1.68□□□□□ -2.14
HNRNPC-201ENST00000336053 LCE1CQ5T751 118 aa1.65□□□□□ -2.15
HNRNPC-201ENST00000336053 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.61□□□□□ -2.15
HNRNPC-201ENST00000336053 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
HNRNPC-201ENST00000336053 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
HNRNPC-201ENST00000336053 AHNAK2Q8IVF2 5795 aa1.47□□□□□ -2.17
HNRNPC-201ENST00000336053 KRTAP5-7Q6L8G8 165 aa1.44□□□□□ -2.18
HNRNPC-201ENST00000336053 KRTAP5-8O75690 187 aa1.42□□□□□ -2.18
HNRNPC-201ENST00000336053 AHNAKQ09666 5890 aaKnown RBP1.36□□□□□ -2.19
HNRNPC-201ENST00000336053 KRTAP5-11Q6L8G4 156 aa1.35□□□□□ -2.19
HNRNPC-201ENST00000336053 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
HNRNPC-201ENST00000336053 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 6.8 ms