RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 KRTAP2-3P0C7H8 128 aa5.93□□□□□ -1.46
LRCH3-201ENST00000334859 KRTAP2-4Q9BYR9 128 aa5.93□□□□□ -1.46
LRCH3-201ENST00000334859 KRTAP2-1Q9BYU5 128 aa5.93□□□□□ -1.46
LRCH3-201ENST00000334859 MUC12Q9UKN1 5478 aa5.88□□□□□ -1.47
LRCH3-201ENST00000334859 KRTAP4-3Q9BYR4 195 aa5.86□□□□□ -1.47
LRCH3-201ENST00000334859 KRTAP19-3Q7Z4W3 81 aa5.82□□□□□ -1.48
LRCH3-201ENST00000334859 LOC100996750A0A140TA64 210 aa5.8□□□□□ -1.48
LRCH3-201ENST00000334859 MT1MQ8N339 61 aa5.79□□□□□ -1.48
LRCH3-201ENST00000334859 MT1GP13640 62 aa5.77□□□□□ -1.49
LRCH3-201ENST00000334859 CRCT1Q9UGL9 99 aa5.72□□□□□ -1.49
LRCH3-201ENST00000334859 SPRR2FQ96RM1 72 aa5.7□□□□□ -1.5
LRCH3-201ENST00000334859 MACF1Q9UPN3 7388 aaKnown RBP5.64□□□□□ -1.51
LRCH3-201ENST00000334859 LCE5AQ5TCM9 118 aa5.62□□□□□ -1.51
LRCH3-201ENST00000334859 DSTQ03001 7570 aaKnown RBP5.58□□□□□ -1.52
LRCH3-201ENST00000334859 KRTAP9-6A0A140TA67 174 aa5.56□□□□□ -1.52
LRCH3-201ENST00000334859 SYNE2Q8WXH0 6885 aaKnown RBP5.55□□□□□ -1.52
LRCH3-201ENST00000334859 MDN1Q9NU22 5596 aa5.39□□□□□ -1.55
LRCH3-201ENST00000334859 LCE3BQ5TA77 95 aa5.34□□□□□ -1.56
LRCH3-201ENST00000334859 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.31□□□□□ -1.56
LRCH3-201ENST00000334859 LCE1AQ5T7P2 110 aa5.29□□□□□ -1.56
LRCH3-201ENST00000334859 KRTAP5-9P26371 169 aa5.27□□□□□ -1.57
LRCH3-201ENST00000334859 KRTAP12-4P60329 112 aa5.25□□□□□ -1.57
LRCH3-201ENST00000334859 KRTAP6-1Q3LI64 71 aa5.23□□□□□ -1.57
LRCH3-201ENST00000334859 SPRR2EP22531 72 aa5.21□□□□□ -1.58
LRCH3-201ENST00000334859 SPRR2BP35325 72 aa5.21□□□□□ -1.58
LRCH3-201ENST00000334859 SPRR2AP35326 72 aa5.21□□□□□ -1.58
LRCH3-201ENST00000334859 MT1AP04731 61 aa5.18□□□□□ -1.58
LRCH3-201ENST00000334859 KRTAP4-9Q9BYQ8 210 aa5.17□□□□□ -1.58
LRCH3-201ENST00000334859 SYNE1Q8NF91 8797 aaKnown RBP5.13□□□□□ -1.59
LRCH3-201ENST00000334859 KRTAP5-5Q701N2 237 aaPredicted RBP5.11□□□□□ -1.59
LRCH3-201ENST00000334859 KRTAP9-7A8MTY7 169 aa5.08□□□□□ -1.6
LRCH3-201ENST00000334859 KRTAP6-3Q3LI67 103 aa5.04□□□□□ -1.6
LRCH3-201ENST00000334859 SPRR2DP22532 72 aa4.99□□□□□ -1.61
LRCH3-201ENST00000334859 LCE3DQ9BYE3 92 aa4.98□□□□□ -1.61
LRCH3-201ENST00000334859 LCE3EQ5T5B0 92 aa4.89□□□□□ -1.63
LRCH3-201ENST00000334859 NEBP20929 6669 aa4.88□□□□□ -1.63
LRCH3-201ENST00000334859 KRTAP9-4Q9BYQ2 154 aa4.88□□□□□ -1.63
LRCH3-201ENST00000334859 KRTAP6-2Q3LI66 62 aa4.73□□□□□ -1.65
LRCH3-201ENST00000334859 MT3P25713 68 aa4.67□□□□□ -1.66
LRCH3-201ENST00000334859 PRM1P04553 51 aa4.64□□□□□ -1.67
LRCH3-201ENST00000334859 OBSCNQ5VST9 7968 aa4.62□□□□□ -1.67
LRCH3-201ENST00000334859 KRTAP4-6Q9BYQ5 205 aa4.61□□□□□ -1.67
LRCH3-201ENST00000334859 KRTAP5-4Q6L8H1 288 aa4.53□□□□□ -1.68
LRCH3-201ENST00000334859 KRTAP20-1Q3LI63 56 aa4.46□□□□□ -1.7
LRCH3-201ENST00000334859 MT4P47944 62 aa4.41□□□□□ -1.7
LRCH3-201ENST00000334859 KRTAP2-2Q9BYT5 123 aa4.35□□□□□ -1.71
LRCH3-201ENST00000334859 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
LRCH3-201ENST00000334859 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
LRCH3-201ENST00000334859 HMCN1Q96RW7 5635 aa4.23□□□□□ -1.73
LRCH3-201ENST00000334859 KRTAP5-2Q701N4 177 aa4.23□□□□□ -1.73
LRCH3-201ENST00000334859 KRTAP4-12Q9BQ66 201 aa4.21□□□□□ -1.74
LRCH3-201ENST00000334859 LCE1DQ5T752 114 aa4.14□□□□□ -1.75
LRCH3-201ENST00000334859 KRTAP5-3Q6L8H2 238 aa4.06□□□□□ -1.76
LRCH3-201ENST00000334859 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
LRCH3-201ENST00000334859 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
LRCH3-201ENST00000334859 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
LRCH3-201ENST00000334859 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
LRCH3-201ENST00000334859 AHNAK2Q8IVF2 5795 aa3.73□□□□□ -1.81
LRCH3-201ENST00000334859 KRTAP5-10Q6L8G5 202 aa3.63□□□□□ -1.83
LRCH3-201ENST00000334859 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
LRCH3-201ENST00000334859 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
LRCH3-201ENST00000334859 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
LRCH3-201ENST00000334859 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
LRCH3-201ENST00000334859 GPR98Q8WXG9 6306 aa3.5□□□□□ -1.85
LRCH3-201ENST00000334859 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
LRCH3-201ENST00000334859 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
LRCH3-201ENST00000334859 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
LRCH3-201ENST00000334859 KRTAP5-7Q6L8G8 165 aa3.32□□□□□ -1.88
LRCH3-201ENST00000334859 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
LRCH3-201ENST00000334859 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
LRCH3-201ENST00000334859 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
LRCH3-201ENST00000334859 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
LRCH3-201ENST00000334859 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
LRCH3-201ENST00000334859 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
LRCH3-201ENST00000334859 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
LRCH3-201ENST00000334859 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
LRCH3-201ENST00000334859 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 140.5 ms