RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 MT1LQ93083 61 aa3.94□□□□□ -1.78
LIMK2-202ENST00000333611 LOC100996750A0A140TA64 210 aa3.93□□□□□ -1.78
LIMK2-202ENST00000333611 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
LIMK2-202ENST00000333611 MUC12Q9UKN1 5478 aa3.93□□□□□ -1.78
LIMK2-202ENST00000333611 MT1EP04732 61 aa3.9□□□□□ -1.78
LIMK2-202ENST00000333611 SSPOA2VEC9 5147 aa3.89□□□□□ -1.79
LIMK2-202ENST00000333611 LCE2AQ5TA79 106 aaPredicted RBP3.89□□□□□ -1.79
LIMK2-202ENST00000333611 MT1GP13640 62 aa3.88□□□□□ -1.79
LIMK2-202ENST00000333611 KRTAP4-9Q9BYQ8 210 aa3.81□□□□□ -1.8
LIMK2-202ENST00000333611 LCE3BQ5TA77 95 aa3.79□□□□□ -1.8
LIMK2-202ENST00000333611 PRM1P04553 51 aa3.72□□□□□ -1.81
LIMK2-202ENST00000333611 KRTAP9-7A8MTY7 169 aa3.68□□□□□ -1.82
LIMK2-202ENST00000333611 LCE2DQ5TA82 110 aaPredicted RBP3.67□□□□□ -1.82
LIMK2-202ENST00000333611 MT1MQ8N339 61 aa3.67□□□□□ -1.82
LIMK2-202ENST00000333611 SYNE2Q8WXH0 6885 aaKnown RBP3.66□□□□□ -1.82
LIMK2-202ENST00000333611 SPRR2FQ96RM1 72 aa3.64□□□□□ -1.83
LIMK2-202ENST00000333611 KRTAP19-3Q7Z4W3 81 aa3.63□□□□□ -1.83
LIMK2-202ENST00000333611 KRTAP19-4Q3LI73 84 aa3.62□□□□□ -1.83
LIMK2-202ENST00000333611 KRTAP19-6Q3LI70 58 aa3.6□□□□□ -1.83
LIMK2-202ENST00000333611 KRTAP9-2Q9BYQ4 174 aa3.54□□□□□ -1.84
LIMK2-202ENST00000333611 MACF1Q9UPN3 7388 aaKnown RBP3.54□□□□□ -1.84
LIMK2-202ENST00000333611 LCE1AQ5T7P2 110 aa3.53□□□□□ -1.84
LIMK2-202ENST00000333611 LCE3DQ9BYE3 92 aa3.53□□□□□ -1.84
LIMK2-202ENST00000333611 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
LIMK2-202ENST00000333611 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
LIMK2-202ENST00000333611 KRTAP6-3Q3LI67 103 aa3.44□□□□□ -1.86
LIMK2-202ENST00000333611 MDN1Q9NU22 5596 aa3.43□□□□□ -1.86
LIMK2-202ENST00000333611 KRTAP9-6A0A140TA67 174 aa3.42□□□□□ -1.86
LIMK2-202ENST00000333611 LCE5AQ5TCM9 118 aa3.42□□□□□ -1.86
LIMK2-202ENST00000333611 KRTAP6-1Q3LI64 71 aa3.41□□□□□ -1.86
LIMK2-202ENST00000333611 MUC19Q7Z5P9 8384 aa3.36□□□□□ -1.87
LIMK2-202ENST00000333611 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
LIMK2-202ENST00000333611 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
LIMK2-202ENST00000333611 MT1AP04731 61 aa3.25□□□□□ -1.89
LIMK2-202ENST00000333611 KRTAP2-2Q9BYT5 123 aa3.25□□□□□ -1.89
LIMK2-202ENST00000333611 SPRR2EP22531 72 aa3.23□□□□□ -1.89
LIMK2-202ENST00000333611 SPRR2BP35325 72 aa3.23□□□□□ -1.89
LIMK2-202ENST00000333611 SPRR2AP35326 72 aa3.23□□□□□ -1.89
LIMK2-202ENST00000333611 LCE1DQ5T752 114 aa3.22□□□□□ -1.89
LIMK2-202ENST00000333611 SPRR2DP22532 72 aa3.06□□□□□ -1.92
LIMK2-202ENST00000333611 KRTAP9-4Q9BYQ2 154 aa3.05□□□□□ -1.92
LIMK2-202ENST00000333611 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.01□□□□□ -1.93
LIMK2-202ENST00000333611 MT3P25713 68 aa2.98□□□□□ -1.93
LIMK2-202ENST00000333611 KRTAP5-9P26371 169 aa2.94□□□□□ -1.94
LIMK2-202ENST00000333611 KRTAP4-11Q9BYQ6 195 aa2.85□□□□□ -1.95
LIMK2-202ENST00000333611 MT4P47944 62 aa2.85□□□□□ -1.95
LIMK2-202ENST00000333611 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
LIMK2-202ENST00000333611 KRTAP4-6Q9BYQ5 205 aa2.76□□□□□ -1.97
LIMK2-202ENST00000333611 NEBP20929 6669 aa2.76□□□□□ -1.97
LIMK2-202ENST00000333611 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
LIMK2-202ENST00000333611 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
LIMK2-202ENST00000333611 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
LIMK2-202ENST00000333611 KRTAP20-2Q3LI61 65 aa2.56□□□□□ -2
LIMK2-202ENST00000333611 KRTAP5-4Q6L8H1 288 aa2.54□□□□□ -2
LIMK2-202ENST00000333611 KRTAP20-1Q3LI63 56 aa2.53□□□□□ -2
LIMK2-202ENST00000333611 LCE4AQ5TA78 99 aa2.42□□□□□ -2.02
LIMK2-202ENST00000333611 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
LIMK2-202ENST00000333611 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.03
LIMK2-202ENST00000333611 KRTAP5-3Q6L8H2 238 aa2.31□□□□□ -2.04
LIMK2-202ENST00000333611 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
LIMK2-202ENST00000333611 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
LIMK2-202ENST00000333611 KRTAP4-2Q9BYR5 136 aa2.2□□□□□ -2.06
LIMK2-202ENST00000333611 KRTAP5-1Q6L8H4 278 aa2.16□□□□□ -2.06
LIMK2-202ENST00000333611 AHNAK2Q8IVF2 5795 aa2.1□□□□□ -2.07
LIMK2-202ENST00000333611 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
LIMK2-202ENST00000333611 GPR98Q8WXG9 6306 aa2.07□□□□□ -2.08
LIMK2-202ENST00000333611 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
LIMK2-202ENST00000333611 KRTAP9-9Q9BYP9 154 aa2.06□□□□□ -2.08
LIMK2-202ENST00000333611 KRTAP4-12Q9BQ66 201 aa2.05□□□□□ -2.08
LIMK2-202ENST00000333611 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
LIMK2-202ENST00000333611 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
LIMK2-202ENST00000333611 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
LIMK2-202ENST00000333611 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
LIMK2-202ENST00000333611 KRTAP5-11Q6L8G4 156 aa1.79□□□□□ -2.12
LIMK2-202ENST00000333611 AHNAKQ09666 5890 aaKnown RBP1.65□□□□□ -2.15
LIMK2-202ENST00000333611 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
LIMK2-202ENST00000333611 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms