RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 KRTAP4-3Q9BYR4 195 aa6.53□□□□□ -1.36
LAMP1-201ENST00000332556 KRTAP2-3P0C7H8 128 aa6.48□□□□□ -1.37
LAMP1-201ENST00000332556 KRTAP2-4Q9BYR9 128 aa6.48□□□□□ -1.37
LAMP1-201ENST00000332556 KRTAP2-1Q9BYU5 128 aa6.48□□□□□ -1.37
LAMP1-201ENST00000332556 LOC100996750A0A140TA64 210 aa6.45□□□□□ -1.38
LAMP1-201ENST00000332556 CRCT1Q9UGL9 99 aa6.36□□□□□ -1.39
LAMP1-201ENST00000332556 MACF1Q9UPN3 7388 aaKnown RBP6.36□□□□□ -1.39
LAMP1-201ENST00000332556 MT1GP13640 62 aa6.32□□□□□ -1.4
LAMP1-201ENST00000332556 SYNE2Q8WXH0 6885 aaKnown RBP6.28□□□□□ -1.4
LAMP1-201ENST00000332556 MT1MQ8N339 61 aa6.2□□□□□ -1.42
LAMP1-201ENST00000332556 SPRR2FQ96RM1 72 aa6.2□□□□□ -1.42
LAMP1-201ENST00000332556 KRTAP19-3Q7Z4W3 81 aa6.19□□□□□ -1.42
LAMP1-201ENST00000332556 MDN1Q9NU22 5596 aa6.15□□□□□ -1.42
LAMP1-201ENST00000332556 KRTAP19-4Q3LI73 84 aa6.1□□□□□ -1.43
LAMP1-201ENST00000332556 SYNE1Q8NF91 8797 aaKnown RBP6.03□□□□□ -1.44
LAMP1-201ENST00000332556 LCE5AQ5TCM9 118 aa5.98□□□□□ -1.45
LAMP1-201ENST00000332556 KRTAP9-4Q9BYQ2 154 aa5.92□□□□□ -1.46
LAMP1-201ENST00000332556 KRTAP9-2Q9BYQ4 174 aa5.92□□□□□ -1.46
LAMP1-201ENST00000332556 KRTAP12-4P60329 112 aa5.9□□□□□ -1.46
LAMP1-201ENST00000332556 LCE3BQ5TA77 95 aa5.83□□□□□ -1.48
LAMP1-201ENST00000332556 KRTAP9-9Q9BYP9 154 aa5.81□□□□□ -1.48
LAMP1-201ENST00000332556 KRTAP4-9Q9BYQ8 210 aa5.8□□□□□ -1.48
LAMP1-201ENST00000332556 LCE4AQ5TA78 99 aa5.78□□□□□ -1.48
LAMP1-201ENST00000332556 OBSCNQ5VST9 7968 aa5.73□□□□□ -1.49
LAMP1-201ENST00000332556 LCE1AQ5T7P2 110 aa5.71□□□□□ -1.5
LAMP1-201ENST00000332556 KRTAP9-6A0A140TA67 174 aa5.69□□□□□ -1.5
LAMP1-201ENST00000332556 KRTAP9-7A8MTY7 169 aa5.69□□□□□ -1.5
LAMP1-201ENST00000332556 KRTAP6-1Q3LI64 71 aa5.69□□□□□ -1.5
LAMP1-201ENST00000332556 SPRR2EP22531 72 aa5.64□□□□□ -1.51
LAMP1-201ENST00000332556 SPRR2BP35325 72 aa5.64□□□□□ -1.51
LAMP1-201ENST00000332556 SPRR2AP35326 72 aa5.64□□□□□ -1.51
LAMP1-201ENST00000332556 KRTAP5-9P26371 169 aa5.56□□□□□ -1.52
LAMP1-201ENST00000332556 MT1AP04731 61 aa5.46□□□□□ -1.54
LAMP1-201ENST00000332556 LCE1FQ5T754 118 aa5.43□□□□□ -1.54
LAMP1-201ENST00000332556 KRTAP5-5Q701N2 237 aaPredicted RBP5.41□□□□□ -1.54
LAMP1-201ENST00000332556 SPRR2DP22532 72 aa5.37□□□□□ -1.55
LAMP1-201ENST00000332556 LCE3DQ9BYE3 92 aa5.37□□□□□ -1.55
LAMP1-201ENST00000332556 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.3□□□□□ -1.56
LAMP1-201ENST00000332556 LCE3EQ5T5B0 92 aa5.3□□□□□ -1.56
LAMP1-201ENST00000332556 PRM1P04553 51 aa5.27□□□□□ -1.57
LAMP1-201ENST00000332556 KRTAP2-2Q9BYT5 123 aa5.2□□□□□ -1.58
LAMP1-201ENST00000332556 KRTAP6-3Q3LI67 103 aa5.14□□□□□ -1.59
LAMP1-201ENST00000332556 KRTAP6-2Q3LI66 62 aa5.14□□□□□ -1.59
LAMP1-201ENST00000332556 NEBP20929 6669 aa4.96□□□□□ -1.62
LAMP1-201ENST00000332556 MT4P47944 62 aa4.91□□□□□ -1.62
LAMP1-201ENST00000332556 MT3P25713 68 aa4.9□□□□□ -1.62
LAMP1-201ENST00000332556 KRTAP4-6Q9BYQ5 205 aa4.9□□□□□ -1.63
LAMP1-201ENST00000332556 LCE1EQ5T753 118 aa4.78□□□□□ -1.64
LAMP1-201ENST00000332556 KRTAP5-4Q6L8H1 288 aa4.77□□□□□ -1.65
LAMP1-201ENST00000332556 HMCN1Q96RW7 5635 aa4.68□□□□□ -1.66
LAMP1-201ENST00000332556 KRTAP4-12Q9BQ66 201 aa4.66□□□□□ -1.66
LAMP1-201ENST00000332556 KRTAP20-2Q3LI61 65 aa4.6□□□□□ -1.67
LAMP1-201ENST00000332556 LCE1DQ5T752 114 aa4.53□□□□□ -1.68
LAMP1-201ENST00000332556 KRTAP5-2Q701N4 177 aa4.42□□□□□ -1.7
LAMP1-201ENST00000332556 KRTAP5-3Q6L8H2 238 aa4.34□□□□□ -1.72
LAMP1-201ENST00000332556 MUC5ACP98088 5654 aa4.33□□□□□ -1.72
LAMP1-201ENST00000332556 KRTAP20-1Q3LI63 56 aa4.26□□□□□ -1.73
LAMP1-201ENST00000332556 LCE1BQ5T7P3 118 aa4.23□□□□□ -1.73
LAMP1-201ENST00000332556 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
LAMP1-201ENST00000332556 GPR98Q8WXG9 6306 aa3.94□□□□□ -1.78
LAMP1-201ENST00000332556 KRTAP4-2Q9BYR5 136 aa3.89□□□□□ -1.79
LAMP1-201ENST00000332556 KRTAP5-10Q6L8G5 202 aa3.88□□□□□ -1.79
LAMP1-201ENST00000332556 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
LAMP1-201ENST00000332556 LCE1CQ5T751 118 aa3.75□□□□□ -1.81
LAMP1-201ENST00000332556 AHNAK2Q8IVF2 5795 aa3.71□□□□□ -1.82
LAMP1-201ENST00000332556 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
LAMP1-201ENST00000332556 MUC5BQ9HC84 5762 aaPredicted RBP3.61□□□□□ -1.83
LAMP1-201ENST00000332556 KRTAP21-2Q3LI59 83 aa3.61□□□□□ -1.83
LAMP1-201ENST00000332556 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
LAMP1-201ENST00000332556 MUC19Q7Z5P9 8384 aa3.55□□□□□ -1.84
LAMP1-201ENST00000332556 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
LAMP1-201ENST00000332556 KRTAP5-7Q6L8G8 165 aa3.38□□□□□ -1.87
LAMP1-201ENST00000332556 KRTAP21-1Q3LI58 79 aa3.24□□□□□ -1.89
LAMP1-201ENST00000332556 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
LAMP1-201ENST00000332556 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
LAMP1-201ENST00000332556 PHGR1C9JFL3 82 aa2.84□□□□□ -1.96
LAMP1-201ENST00000332556 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 508.5 ms