RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 MT1EP04732 61 aa2.95□□□□□ -1.94
LIMK2-201ENST00000331728 MT1GP13640 62 aa2.86□□□□□ -1.95
LIMK2-201ENST00000331728 KRTAP9-2Q9BYQ4 174 aa2.85□□□□□ -1.95
LIMK2-201ENST00000331728 LOC100996750A0A140TA64 210 aa2.82□□□□□ -1.96
LIMK2-201ENST00000331728 KRTAP4-3Q9BYR4 195 aa2.82□□□□□ -1.96
LIMK2-201ENST00000331728 KRTAP19-6Q3LI70 58 aa2.79□□□□□ -1.96
LIMK2-201ENST00000331728 KRTAP19-3Q7Z4W3 81 aa2.78□□□□□ -1.97
LIMK2-201ENST00000331728 KRTAP12-4P60329 112 aa2.77□□□□□ -1.97
LIMK2-201ENST00000331728 MT1MQ8N339 61 aa2.77□□□□□ -1.97
LIMK2-201ENST00000331728 SSPOA2VEC9 5147 aa2.76□□□□□ -1.97
LIMK2-201ENST00000331728 KRTAP9-6A0A140TA67 174 aa2.74□□□□□ -1.97
LIMK2-201ENST00000331728 SPRR2FQ96RM1 72 aa2.74□□□□□ -1.97
LIMK2-201ENST00000331728 LCE3BQ5TA77 95 aa2.72□□□□□ -1.97
LIMK2-201ENST00000331728 LCE2DQ5TA82 110 aaPredicted RBP2.7□□□□□ -1.98
LIMK2-201ENST00000331728 DSTQ03001 7570 aaKnown RBP2.69□□□□□ -1.98
LIMK2-201ENST00000331728 FCGBPQ9Y6R7 5405 aaPredicted RBP2.67□□□□□ -1.98
LIMK2-201ENST00000331728 MUC12Q9UKN1 5478 aa2.67□□□□□ -1.98
LIMK2-201ENST00000331728 LCE5AQ5TCM9 118 aa2.59□□□□□ -1.99
LIMK2-201ENST00000331728 KRTAP4-9Q9BYQ8 210 aa2.59□□□□□ -1.99
LIMK2-201ENST00000331728 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
LIMK2-201ENST00000331728 MACF1Q9UPN3 7388 aaKnown RBP2.56□□□□□ -2
LIMK2-201ENST00000331728 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
LIMK2-201ENST00000331728 MT1AP04731 61 aa2.54□□□□□ -2
LIMK2-201ENST00000331728 KRTAP6-1Q3LI64 71 aa2.52□□□□□ -2.01
LIMK2-201ENST00000331728 SYNE2Q8WXH0 6885 aaKnown RBP2.52□□□□□ -2.01
LIMK2-201ENST00000331728 KRTAP9-7A8MTY7 169 aa2.51□□□□□ -2.01
LIMK2-201ENST00000331728 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.48□□□□□ -2.01
LIMK2-201ENST00000331728 SPRR2EP22531 72 aa2.47□□□□□ -2.01
LIMK2-201ENST00000331728 SPRR2BP35325 72 aa2.47□□□□□ -2.01
LIMK2-201ENST00000331728 SPRR2AP35326 72 aa2.47□□□□□ -2.01
LIMK2-201ENST00000331728 PRM1P04553 51 aa2.46□□□□□ -2.02
LIMK2-201ENST00000331728 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
LIMK2-201ENST00000331728 KRTAP2-2Q9BYT5 123 aa2.41□□□□□ -2.02
LIMK2-201ENST00000331728 LCE1AQ5T7P2 110 aa2.39□□□□□ -2.03
LIMK2-201ENST00000331728 MDN1Q9NU22 5596 aa2.37□□□□□ -2.03
LIMK2-201ENST00000331728 SPRR2DP22532 72 aa2.36□□□□□ -2.03
LIMK2-201ENST00000331728 KRTAP9-4Q9BYQ2 154 aa2.33□□□□□ -2.04
LIMK2-201ENST00000331728 KRTAP6-2Q3LI66 62 aa2.33□□□□□ -2.04
LIMK2-201ENST00000331728 MT3P25713 68 aa2.32□□□□□ -2.04
LIMK2-201ENST00000331728 KRTAP5-9P26371 169 aa2.31□□□□□ -2.04
LIMK2-201ENST00000331728 KRTAP6-3Q3LI67 103 aa2.31□□□□□ -2.04
LIMK2-201ENST00000331728 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
LIMK2-201ENST00000331728 KRTAP20-1Q3LI63 56 aa2.23□□□□□ -2.05
LIMK2-201ENST00000331728 NEBP20929 6669 aa2.17□□□□□ -2.06
LIMK2-201ENST00000331728 MT4P47944 62 aa2.11□□□□□ -2.07
LIMK2-201ENST00000331728 LCE1EQ5T753 118 aa2.08□□□□□ -2.08
LIMK2-201ENST00000331728 LCE1DQ5T752 114 aa2.03□□□□□ -2.09
LIMK2-201ENST00000331728 LCE1FQ5T754 118 aa2.02□□□□□ -2.09
LIMK2-201ENST00000331728 KRTAP4-6Q9BYQ5 205 aa2.01□□□□□ -2.09
LIMK2-201ENST00000331728 KRTAP5-4Q6L8H1 288 aa1.98□□□□□ -2.09
LIMK2-201ENST00000331728 GPR98Q8WXG9 6306 aa1.97□□□□□ -2.09
LIMK2-201ENST00000331728 LCE4AQ5TA78 99 aa1.96□□□□□ -2.1
LIMK2-201ENST00000331728 LCE1BQ5T7P3 118 aa1.96□□□□□ -2.1
LIMK2-201ENST00000331728 KRTAP20-2Q3LI61 65 aa1.95□□□□□ -2.1
LIMK2-201ENST00000331728 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
LIMK2-201ENST00000331728 HMCN1Q96RW7 5635 aa1.87□□□□□ -2.11
LIMK2-201ENST00000331728 KRTAP5-2Q701N4 177 aa1.86□□□□□ -2.11
LIMK2-201ENST00000331728 KRTAP4-11Q9BYQ6 195 aa1.85□□□□□ -2.11
LIMK2-201ENST00000331728 KRTAP9-9Q9BYP9 154 aa1.81□□□□□ -2.12
LIMK2-201ENST00000331728 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
LIMK2-201ENST00000331728 KRTAP5-3Q6L8H2 238 aa1.76□□□□□ -2.13
LIMK2-201ENST00000331728 KRTAP5-1Q6L8H4 278 aa1.71□□□□□ -2.14
LIMK2-201ENST00000331728 LCE1CQ5T751 118 aa1.65□□□□□ -2.15
LIMK2-201ENST00000331728 KRTAP4-2Q9BYR5 136 aa1.65□□□□□ -2.15
LIMK2-201ENST00000331728 AHNAK2Q8IVF2 5795 aa1.62□□□□□ -2.15
LIMK2-201ENST00000331728 KRTAP4-4Q9BYR3 166 aa1.58□□□□□ -2.16
LIMK2-201ENST00000331728 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
LIMK2-201ENST00000331728 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.54□□□□□ -2.16
LIMK2-201ENST00000331728 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
LIMK2-201ENST00000331728 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
LIMK2-201ENST00000331728 KRTAP5-8O75690 187 aa1.51□□□□□ -2.17
LIMK2-201ENST00000331728 AHNAKQ09666 5890 aaKnown RBP1.46□□□□□ -2.18
LIMK2-201ENST00000331728 KRTAP4-12Q9BQ66 201 aa1.46□□□□□ -2.18
LIMK2-201ENST00000331728 KRTAP5-11Q6L8G4 156 aa1.42□□□□□ -2.18
LIMK2-201ENST00000331728 MUC5BQ9HC84 5762 aaPredicted RBP1.41□□□□□ -2.18
LIMK2-201ENST00000331728 PHGR1C9JFL3 82 aa1.21□□□□□ -2.22
LIMK2-201ENST00000331728 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms