RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 DSTQ03001 7570 aaKnown RBP5.97□□□□□ -1.45
SOCS3-201ENST00000330871 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
SOCS3-201ENST00000330871 FCGBPQ9Y6R7 5405 aaPredicted RBP5.9□□□□□ -1.46
SOCS3-201ENST00000330871 MUC12Q9UKN1 5478 aa5.88□□□□□ -1.47
SOCS3-201ENST00000330871 LCE2DQ5TA82 110 aaPredicted RBP5.85□□□□□ -1.47
SOCS3-201ENST00000330871 KRTAP19-6Q3LI70 58 aa5.83□□□□□ -1.48
SOCS3-201ENST00000330871 KRTAP4-3Q9BYR4 195 aa5.82□□□□□ -1.48
SOCS3-201ENST00000330871 CRCT1Q9UGL9 99 aa5.79□□□□□ -1.48
SOCS3-201ENST00000330871 MT1GP13640 62 aa5.77□□□□□ -1.49
SOCS3-201ENST00000330871 SYNE1Q8NF91 8797 aaKnown RBP5.74□□□□□ -1.49
SOCS3-201ENST00000330871 KRTAP9-2Q9BYQ4 174 aa5.63□□□□□ -1.51
SOCS3-201ENST00000330871 OBSCNQ5VST9 7968 aa5.62□□□□□ -1.51
SOCS3-201ENST00000330871 KRTAP4-9Q9BYQ8 210 aa5.61□□□□□ -1.51
SOCS3-201ENST00000330871 MT1MQ8N339 61 aa5.59□□□□□ -1.52
SOCS3-201ENST00000330871 KRTAP19-3Q7Z4W3 81 aa5.57□□□□□ -1.52
SOCS3-201ENST00000330871 MACF1Q9UPN3 7388 aaKnown RBP5.54□□□□□ -1.52
SOCS3-201ENST00000330871 LCE3BQ5TA77 95 aa5.53□□□□□ -1.52
SOCS3-201ENST00000330871 SYNE2Q8WXH0 6885 aaKnown RBP5.52□□□□□ -1.53
SOCS3-201ENST00000330871 KRTAP9-7A8MTY7 169 aa5.46□□□□□ -1.54
SOCS3-201ENST00000330871 PRM1P04553 51 aa5.42□□□□□ -1.54
SOCS3-201ENST00000330871 LCE5AQ5TCM9 118 aa5.34□□□□□ -1.55
SOCS3-201ENST00000330871 KRTAP5-5Q701N2 237 aaPredicted RBP5.32□□□□□ -1.56
SOCS3-201ENST00000330871 LCE3DQ9BYE3 92 aa5.28□□□□□ -1.56
SOCS3-201ENST00000330871 LCE3EQ5T5B0 92 aa5.26□□□□□ -1.57
SOCS3-201ENST00000330871 MT1AP04731 61 aa5.25□□□□□ -1.57
SOCS3-201ENST00000330871 SPRR2FQ96RM1 72 aa5.23□□□□□ -1.57
SOCS3-201ENST00000330871 MDN1Q9NU22 5596 aa5.21□□□□□ -1.58
SOCS3-201ENST00000330871 KRTAP6-3Q3LI67 103 aa5.17□□□□□ -1.58
SOCS3-201ENST00000330871 KRTAP6-1Q3LI64 71 aa5.16□□□□□ -1.58
SOCS3-201ENST00000330871 KRTAP9-6A0A140TA67 174 aa5.15□□□□□ -1.58
SOCS3-201ENST00000330871 KRTAP5-9P26371 169 aa5.08□□□□□ -1.6
SOCS3-201ENST00000330871 KRTAP6-2Q3LI66 62 aa5.03□□□□□ -1.6
SOCS3-201ENST00000330871 LCE1AQ5T7P2 110 aa5.03□□□□□ -1.6
SOCS3-201ENST00000330871 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.98□□□□□ -1.61
SOCS3-201ENST00000330871 KRTAP2-2Q9BYT5 123 aa4.91□□□□□ -1.62
SOCS3-201ENST00000330871 SPRR2EP22531 72 aa4.85□□□□□ -1.63
SOCS3-201ENST00000330871 SPRR2BP35325 72 aa4.85□□□□□ -1.63
SOCS3-201ENST00000330871 SPRR2AP35326 72 aa4.85□□□□□ -1.63
SOCS3-201ENST00000330871 KRTAP9-4Q9BYQ2 154 aa4.76□□□□□ -1.65
SOCS3-201ENST00000330871 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
SOCS3-201ENST00000330871 SPRR2DP22532 72 aa4.66□□□□□ -1.66
SOCS3-201ENST00000330871 NEBP20929 6669 aa4.61□□□□□ -1.67
SOCS3-201ENST00000330871 MT3P25713 68 aa4.56□□□□□ -1.68
SOCS3-201ENST00000330871 LCE1DQ5T752 114 aa4.49□□□□□ -1.69
SOCS3-201ENST00000330871 KRTAP5-4Q6L8H1 288 aa4.3□□□□□ -1.72
SOCS3-201ENST00000330871 MT4P47944 62 aa4.16□□□□□ -1.74
SOCS3-201ENST00000330871 LCE4AQ5TA78 99 aa4.14□□□□□ -1.75
SOCS3-201ENST00000330871 KRTAP4-6Q9BYQ5 205 aa4.14□□□□□ -1.75
SOCS3-201ENST00000330871 KRTAP20-1Q3LI63 56 aa4.12□□□□□ -1.75
SOCS3-201ENST00000330871 KRTAP4-11Q9BYQ6 195 aa4.08□□□□□ -1.76
SOCS3-201ENST00000330871 HMCN1Q96RW7 5635 aa4.06□□□□□ -1.76
SOCS3-201ENST00000330871 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
SOCS3-201ENST00000330871 KRTAP5-2Q701N4 177 aa3.96□□□□□ -1.78
SOCS3-201ENST00000330871 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
SOCS3-201ENST00000330871 KRTAP5-3Q6L8H2 238 aa3.87□□□□□ -1.79
SOCS3-201ENST00000330871 KRTAP5-10Q6L8G5 202 aa3.77□□□□□ -1.81
SOCS3-201ENST00000330871 MUC19Q7Z5P9 8384 aa3.7□□□□□ -1.82
SOCS3-201ENST00000330871 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
SOCS3-201ENST00000330871 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
SOCS3-201ENST00000330871 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
SOCS3-201ENST00000330871 AHNAK2Q8IVF2 5795 aa3.46□□□□□ -1.86
SOCS3-201ENST00000330871 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
SOCS3-201ENST00000330871 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
SOCS3-201ENST00000330871 KRTAP21-1Q3LI58 79 aa3.37□□□□□ -1.87
SOCS3-201ENST00000330871 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
SOCS3-201ENST00000330871 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
SOCS3-201ENST00000330871 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.28□□□□□ -1.88
SOCS3-201ENST00000330871 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.89
SOCS3-201ENST00000330871 KRTAP5-7Q6L8G8 165 aa3.24□□□□□ -1.89
SOCS3-201ENST00000330871 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
SOCS3-201ENST00000330871 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
SOCS3-201ENST00000330871 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
SOCS3-201ENST00000330871 KRTAP9-9Q9BYP9 154 aa2.91□□□□□ -1.94
SOCS3-201ENST00000330871 KRTAP4-12Q9BQ66 201 aa2.88□□□□□ -1.95
SOCS3-201ENST00000330871 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
SOCS3-201ENST00000330871 PHGR1C9JFL3 82 aa2.54□□□□□ -2
SOCS3-201ENST00000330871 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 80.8 ms