RNA–Protein interactions for RNA: ENST00000329276.9

NOP56-201, Transcript of NOP56 ribonucleoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOP56, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-201ENST00000329276 KRTAP19-6Q3LI70 58 aa6.42□□□□□ -1.38
NOP56-201ENST00000329276 KRTAP9-2Q9BYQ4 174 aa6.42□□□□□ -1.38
NOP56-201ENST00000329276 MT1EP04732 61 aa6.41□□□□□ -1.38
NOP56-201ENST00000329276 MACF1Q9UPN3 7388 aaKnown RBP6.25□□□□□ -1.41
NOP56-201ENST00000329276 KRTAP12-4P60329 112 aa6.2□□□□□ -1.42
NOP56-201ENST00000329276 CRCT1Q9UGL9 99 aa6.18□□□□□ -1.42
NOP56-201ENST00000329276 SYNE2Q8WXH0 6885 aaKnown RBP6.17□□□□□ -1.42
NOP56-201ENST00000329276 LOC100996750A0A140TA64 210 aa6.09□□□□□ -1.43
NOP56-201ENST00000329276 MUC12Q9UKN1 5478 aa6.09□□□□□ -1.44
NOP56-201ENST00000329276 MT1GP13640 62 aa6.05□□□□□ -1.44
NOP56-201ENST00000329276 KRTAP4-3Q9BYR4 195 aa5.99□□□□□ -1.45
NOP56-201ENST00000329276 MT1MQ8N339 61 aa5.95□□□□□ -1.46
NOP56-201ENST00000329276 KRTAP19-3Q7Z4W3 81 aa5.9□□□□□ -1.47
NOP56-201ENST00000329276 MDN1Q9NU22 5596 aa5.86□□□□□ -1.47
NOP56-201ENST00000329276 KRTAP9-6A0A140TA67 174 aa5.86□□□□□ -1.47
NOP56-201ENST00000329276 SPRR2FQ96RM1 72 aa5.85□□□□□ -1.47
NOP56-201ENST00000329276 MT1AP04731 61 aa5.79□□□□□ -1.48
NOP56-201ENST00000329276 DSTQ03001 7570 aaKnown RBP5.78□□□□□ -1.48
NOP56-201ENST00000329276 LCE3BQ5TA77 95 aa5.72□□□□□ -1.49
NOP56-201ENST00000329276 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.71□□□□□ -1.5
NOP56-201ENST00000329276 KRTAP4-9Q9BYQ8 210 aa5.64□□□□□ -1.51
NOP56-201ENST00000329276 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
NOP56-201ENST00000329276 KRTAP5-9P26371 169 aa5.62□□□□□ -1.51
NOP56-201ENST00000329276 LCE3DQ9BYE3 92 aa5.61□□□□□ -1.51
NOP56-201ENST00000329276 LCE3EQ5T5B0 92 aa5.59□□□□□ -1.51
NOP56-201ENST00000329276 PRM1P04553 51 aa5.55□□□□□ -1.52
NOP56-201ENST00000329276 LCE1AQ5T7P2 110 aa5.53□□□□□ -1.52
NOP56-201ENST00000329276 KRTAP5-5Q701N2 237 aaPredicted RBP5.53□□□□□ -1.52
NOP56-201ENST00000329276 KRTAP9-7A8MTY7 169 aa5.52□□□□□ -1.53
NOP56-201ENST00000329276 SPRR2EP22531 72 aa5.5□□□□□ -1.53
NOP56-201ENST00000329276 SPRR2BP35325 72 aa5.5□□□□□ -1.53
NOP56-201ENST00000329276 SPRR2AP35326 72 aa5.5□□□□□ -1.53
NOP56-201ENST00000329276 SYNE1Q8NF91 8797 aaKnown RBP5.5□□□□□ -1.53
NOP56-201ENST00000329276 KRTAP6-3Q3LI67 103 aa5.49□□□□□ -1.53
NOP56-201ENST00000329276 KRTAP6-1Q3LI64 71 aa5.48□□□□□ -1.53
NOP56-201ENST00000329276 NEBP20929 6669 aa5.29□□□□□ -1.56
NOP56-201ENST00000329276 SPRR2DP22532 72 aa5.28□□□□□ -1.56
NOP56-201ENST00000329276 KRTAP6-2Q3LI66 62 aa5.22□□□□□ -1.57
NOP56-201ENST00000329276 KRTAP9-4Q9BYQ2 154 aa5.08□□□□□ -1.6
NOP56-201ENST00000329276 KRTAP2-2Q9BYT5 123 aa4.98□□□□□ -1.61
NOP56-201ENST00000329276 MT3P25713 68 aa4.88□□□□□ -1.63
NOP56-201ENST00000329276 OBSCNQ5VST9 7968 aa4.76□□□□□ -1.65
NOP56-201ENST00000329276 KRTAP20-1Q3LI63 56 aa4.74□□□□□ -1.65
NOP56-201ENST00000329276 MT4P47944 62 aa4.7□□□□□ -1.66
NOP56-201ENST00000329276 KRTAP5-4Q6L8H1 288 aa4.68□□□□□ -1.66
NOP56-201ENST00000329276 KRTAP4-6Q9BYQ5 205 aa4.65□□□□□ -1.67
NOP56-201ENST00000329276 HMCN1Q96RW7 5635 aa4.63□□□□□ -1.67
NOP56-201ENST00000329276 LCE4AQ5TA78 99 aa4.55□□□□□ -1.68
NOP56-201ENST00000329276 LCE1DQ5T752 114 aa4.53□□□□□ -1.68
NOP56-201ENST00000329276 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
NOP56-201ENST00000329276 KRTAP20-2Q3LI61 65 aa4.45□□□□□ -1.7
NOP56-201ENST00000329276 KRTAP5-3Q6L8H2 238 aa4.26□□□□□ -1.73
NOP56-201ENST00000329276 KRTAP5-2Q701N4 177 aa4.25□□□□□ -1.73
NOP56-201ENST00000329276 MUC5ACP98088 5654 aa4.11□□□□□ -1.75
NOP56-201ENST00000329276 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
NOP56-201ENST00000329276 KRTAP5-10Q6L8G5 202 aa4.04□□□□□ -1.76
NOP56-201ENST00000329276 AHNAK2Q8IVF2 5795 aa4□□□□□ -1.77
NOP56-201ENST00000329276 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
NOP56-201ENST00000329276 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
NOP56-201ENST00000329276 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
NOP56-201ENST00000329276 LCE1CQ5T751 118 aa3.68□□□□□ -1.82
NOP56-201ENST00000329276 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
NOP56-201ENST00000329276 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
NOP56-201ENST00000329276 KRTAP21-1Q3LI58 79 aa3.58□□□□□ -1.84
NOP56-201ENST00000329276 KRTAP21-2Q3LI59 83 aa3.54□□□□□ -1.84
NOP56-201ENST00000329276 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.84
NOP56-201ENST00000329276 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
NOP56-201ENST00000329276 MUC5BQ9HC84 5762 aaPredicted RBP3.47□□□□□ -1.85
NOP56-201ENST00000329276 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
NOP56-201ENST00000329276 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
NOP56-201ENST00000329276 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
NOP56-201ENST00000329276 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.9
NOP56-201ENST00000329276 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
NOP56-201ENST00000329276 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
NOP56-201ENST00000329276 AHNAKQ09666 5890 aaKnown RBP2.96□□□□□ -1.94
NOP56-201ENST00000329276 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
NOP56-201ENST00000329276 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms