RNA–Protein interactions for RNA: ENST00000325438.12

PACS2-201, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACS2, Length 3,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-201ENST00000325438 KRTAP12-4P60329 112 aa7.99□□□□□ -1.13
PACS2-201ENST00000325438 MT1GP13640 62 aa7.98□□□□□ -1.13
PACS2-201ENST00000325438 MT1LQ93083 61 aa7.96□□□□□ -1.14
PACS2-201ENST00000325438 KRTAP4-3Q9BYR4 195 aa7.93□□□□□ -1.14
PACS2-201ENST00000325438 MT1EP04732 61 aa7.85□□□□□ -1.15
PACS2-201ENST00000325438 LCE3BQ5TA77 95 aa7.72□□□□□ -1.17
PACS2-201ENST00000325438 MUC12Q9UKN1 5478 aa7.7□□□□□ -1.18
PACS2-201ENST00000325438 KRTAP4-9Q9BYQ8 210 aa7.54□□□□□ -1.2
PACS2-201ENST00000325438 KRTAP19-4Q3LI73 84 aa7.49□□□□□ -1.21
PACS2-201ENST00000325438 SPRR2FQ96RM1 72 aa7.43□□□□□ -1.22
PACS2-201ENST00000325438 MT1MQ8N339 61 aa7.38□□□□□ -1.23
PACS2-201ENST00000325438 LCE2AQ5TA79 106 aaPredicted RBP7.37□□□□□ -1.23
PACS2-201ENST00000325438 SSPOA2VEC9 5147 aa7.35□□□□□ -1.23
PACS2-201ENST00000325438 KRTAP19-3Q7Z4W3 81 aa7.34□□□□□ -1.23
PACS2-201ENST00000325438 SYNE2Q8WXH0 6885 aaKnown RBP7.33□□□□□ -1.24
PACS2-201ENST00000325438 LCE2DQ5TA82 110 aaPredicted RBP7.19□□□□□ -1.26
PACS2-201ENST00000325438 LCE3DQ9BYE3 92 aa7.18□□□□□ -1.26
PACS2-201ENST00000325438 PRM1P04553 51 aa7.12□□□□□ -1.27
PACS2-201ENST00000325438 LCE3EQ5T5B0 92 aa7.07□□□□□ -1.28
PACS2-201ENST00000325438 KRTAP9-7A8MTY7 169 aa7.02□□□□□ -1.29
PACS2-201ENST00000325438 KRTAP19-6Q3LI70 58 aa7□□□□□ -1.29
PACS2-201ENST00000325438 KRTAP9-2Q9BYQ4 174 aa6.91□□□□□ -1.3
PACS2-201ENST00000325438 KRTAP6-1Q3LI64 71 aa6.9□□□□□ -1.31
PACS2-201ENST00000325438 LCE5AQ5TCM9 118 aa6.74□□□□□ -1.33
PACS2-201ENST00000325438 MACF1Q9UPN3 7388 aaKnown RBP6.7□□□□□ -1.34
PACS2-201ENST00000325438 MT1AP04731 61 aa6.61□□□□□ -1.35
PACS2-201ENST00000325438 MDN1Q9NU22 5596 aa6.58□□□□□ -1.36
PACS2-201ENST00000325438 KRTAP6-2Q3LI66 62 aa6.57□□□□□ -1.36
PACS2-201ENST00000325438 SPRR2EP22531 72 aa6.51□□□□□ -1.37
PACS2-201ENST00000325438 SPRR2BP35325 72 aa6.51□□□□□ -1.37
PACS2-201ENST00000325438 SPRR2AP35326 72 aa6.51□□□□□ -1.37
PACS2-201ENST00000325438 KRTAP5-5Q701N2 237 aaPredicted RBP6.48□□□□□ -1.37
PACS2-201ENST00000325438 LCE1AQ5T7P2 110 aa6.33□□□□□ -1.4
PACS2-201ENST00000325438 KRTAP9-6A0A140TA67 174 aa6.3□□□□□ -1.4
PACS2-201ENST00000325438 KRTAP6-3Q3LI67 103 aa6.28□□□□□ -1.4
PACS2-201ENST00000325438 MT3P25713 68 aa6.19□□□□□ -1.42
PACS2-201ENST00000325438 SPRR2DP22532 72 aa6.17□□□□□ -1.42
PACS2-201ENST00000325438 KRTAP9-4Q9BYQ2 154 aa6.16□□□□□ -1.42
PACS2-201ENST00000325438 KRTAP2-2Q9BYT5 123 aa6.05□□□□□ -1.44
PACS2-201ENST00000325438 LCE1EQ5T753 118 aa6.04□□□□□ -1.44
PACS2-201ENST00000325438 MUC19Q7Z5P9 8384 aa5.8□□□□□ -1.48
PACS2-201ENST00000325438 MT4P47944 62 aa5.79□□□□□ -1.48
PACS2-201ENST00000325438 LCE1DQ5T752 114 aa5.69□□□□□ -1.5
PACS2-201ENST00000325438 LCE1BQ5T7P3 118 aa5.58□□□□□ -1.52
PACS2-201ENST00000325438 KRTAP5-9P26371 169 aa5.56□□□□□ -1.52
PACS2-201ENST00000325438 KRTAP4-11Q9BYQ6 195 aa5.45□□□□□ -1.54
PACS2-201ENST00000325438 KRTAP4-6Q9BYQ5 205 aa5.41□□□□□ -1.54
PACS2-201ENST00000325438 MUC5ACP98088 5654 aa5.15□□□□□ -1.58
PACS2-201ENST00000325438 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.08□□□□□ -1.6
PACS2-201ENST00000325438 KRTAP20-2Q3LI61 65 aa5.01□□□□□ -1.61
PACS2-201ENST00000325438 NEBP20929 6669 aa4.93□□□□□ -1.62
PACS2-201ENST00000325438 KRTAP5-4Q6L8H1 288 aa4.87□□□□□ -1.63
PACS2-201ENST00000325438 HMCN1Q96RW7 5635 aa4.86□□□□□ -1.63
PACS2-201ENST00000325438 LCE4AQ5TA78 99 aa4.77□□□□□ -1.65
PACS2-201ENST00000325438 LCE1FQ5T754 118 aa4.76□□□□□ -1.65
PACS2-201ENST00000325438 KRTAP5-10Q6L8G5 202 aa4.71□□□□□ -1.65
PACS2-201ENST00000325438 KRTAP4-4Q9BYR3 166 aa4.67□□□□□ -1.66
PACS2-201ENST00000325438 KRTAP5-2Q701N4 177 aa4.54□□□□□ -1.68
PACS2-201ENST00000325438 KRTAP20-1Q3LI63 56 aa4.44□□□□□ -1.7
PACS2-201ENST00000325438 KRTAP5-3Q6L8H2 238 aa4.35□□□□□ -1.71
PACS2-201ENST00000325438 KRTAP4-2Q9BYR5 136 aa4.28□□□□□ -1.73
PACS2-201ENST00000325438 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.73
PACS2-201ENST00000325438 KRTAP4-12Q9BQ66 201 aa4.21□□□□□ -1.74
PACS2-201ENST00000325438 LCE1CQ5T751 118 aa4.17□□□□□ -1.74
PACS2-201ENST00000325438 KRTAP21-2Q3LI59 83 aa4.1□□□□□ -1.75
PACS2-201ENST00000325438 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
PACS2-201ENST00000325438 KRTAP21-1Q3LI58 79 aa3.94□□□□□ -1.78
PACS2-201ENST00000325438 AHNAK2Q8IVF2 5795 aa3.91□□□□□ -1.78
PACS2-201ENST00000325438 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
PACS2-201ENST00000325438 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
PACS2-201ENST00000325438 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
PACS2-201ENST00000325438 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
PACS2-201ENST00000325438 GPR98Q8WXG9 6306 aa3.37□□□□□ -1.87
PACS2-201ENST00000325438 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
PACS2-201ENST00000325438 PHGR1C9JFL3 82 aa3.06□□□□□ -1.92
PACS2-201ENST00000325438 AHNAKQ09666 5890 aaKnown RBP3.05□□□□□ -1.92
PACS2-201ENST00000325438 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 68.5 ms