RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 MT1EP04732 61 aa4□□□□□ -1.77
DDR1-223ENST00000324771 SPRR2EP22531 72 aa3.98□□□□□ -1.77
DDR1-223ENST00000324771 SPRR2BP35325 72 aa3.98□□□□□ -1.77
DDR1-223ENST00000324771 SPRR2AP35326 72 aa3.98□□□□□ -1.77
DDR1-223ENST00000324771 LCE3BQ5TA77 95 aa3.98□□□□□ -1.77
DDR1-223ENST00000324771 LOC100996750A0A140TA64 210 aa3.95□□□□□ -1.78
DDR1-223ENST00000324771 KRTAP19-7Q3SYF9 63 aa3.95□□□□□ -1.78
DDR1-223ENST00000324771 MUC12Q9UKN1 5478 aa3.95□□□□□ -1.78
DDR1-223ENST00000324771 KRTAP9-2Q9BYQ4 174 aa3.93□□□□□ -1.78
DDR1-223ENST00000324771 KRTAP19-6Q3LI70 58 aa3.93□□□□□ -1.78
DDR1-223ENST00000324771 KRTAP19-3Q7Z4W3 81 aa3.91□□□□□ -1.78
DDR1-223ENST00000324771 SSPOA2VEC9 5147 aa3.9□□□□□ -1.79
DDR1-223ENST00000324771 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
DDR1-223ENST00000324771 MT1MQ8N339 61 aa3.82□□□□□ -1.8
DDR1-223ENST00000324771 SPRR2DP22532 72 aa3.81□□□□□ -1.8
DDR1-223ENST00000324771 KRTAP19-4Q3LI73 84 aa3.79□□□□□ -1.8
DDR1-223ENST00000324771 KRTAP9-6A8MVA2 160 aa3.78□□□□□ -1.8
DDR1-223ENST00000324771 MACF1Q9UPN3 7388 aaKnown RBP3.78□□□□□ -1.8
DDR1-223ENST00000324771 KRTAP9-6A0A140TA67 174 aa3.7□□□□□ -1.82
DDR1-223ENST00000324771 LCE2DQ5TA82 110 aaPredicted RBP3.69□□□□□ -1.82
DDR1-223ENST00000324771 KRTAP4-9Q9BYQ8 210 aa3.64□□□□□ -1.83
DDR1-223ENST00000324771 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.83
DDR1-223ENST00000324771 MT4P47944 62 aa3.54□□□□□ -1.84
DDR1-223ENST00000324771 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
DDR1-223ENST00000324771 LCE5AQ5TCM9 118 aa3.5□□□□□ -1.85
DDR1-223ENST00000324771 KRTAP2-3P0C7H8 128 aa3.49□□□□□ -1.85
DDR1-223ENST00000324771 KRTAP2-4Q9BYR9 128 aa3.49□□□□□ -1.85
DDR1-223ENST00000324771 KRTAP2-1Q9BYU5 128 aa3.49□□□□□ -1.85
DDR1-223ENST00000324771 MDN1Q9NU22 5596 aa3.48□□□□□ -1.85
DDR1-223ENST00000324771 KRTAP9-7A8MTY7 169 aa3.47□□□□□ -1.85
DDR1-223ENST00000324771 LCE1AQ5T7P2 110 aa3.47□□□□□ -1.85
DDR1-223ENST00000324771 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
DDR1-223ENST00000324771 PRM1P04553 51 aa3.41□□□□□ -1.86
DDR1-223ENST00000324771 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.41□□□□□ -1.86
DDR1-223ENST00000324771 MT1AP04731 61 aa3.4□□□□□ -1.86
DDR1-223ENST00000324771 MT3P25713 68 aa3.36□□□□□ -1.87
DDR1-223ENST00000324771 KRTAP6-3Q3LI67 103 aa3.29□□□□□ -1.88
DDR1-223ENST00000324771 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
DDR1-223ENST00000324771 LCE1DQ5T752 114 aa3.25□□□□□ -1.89
DDR1-223ENST00000324771 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
DDR1-223ENST00000324771 KRTAP20-1Q3LI63 56 aa3.19□□□□□ -1.9
DDR1-223ENST00000324771 KRTAP9-4Q9BYQ2 154 aa3.17□□□□□ -1.9
DDR1-223ENST00000324771 NEBP20929 6669 aa3.16□□□□□ -1.9
DDR1-223ENST00000324771 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
DDR1-223ENST00000324771 KRTAP5-9P26371 169 aa3.13□□□□□ -1.91
DDR1-223ENST00000324771 KRTAP4-6Q9BYQ5 205 aa3.04□□□□□ -1.92
DDR1-223ENST00000324771 KRTAP2-2Q9BYT5 123 aa3□□□□□ -1.93
DDR1-223ENST00000324771 GPR98Q8WXG9 6306 aa2.96□□□□□ -1.94
DDR1-223ENST00000324771 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
DDR1-223ENST00000324771 LCE4AQ5TA78 99 aa2.93□□□□□ -1.94
DDR1-223ENST00000324771 MUC5ACP98088 5654 aa2.84□□□□□ -1.96
DDR1-223ENST00000324771 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
DDR1-223ENST00000324771 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
DDR1-223ENST00000324771 HMCN1Q96RW7 5635 aa2.71□□□□□ -1.98
DDR1-223ENST00000324771 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
DDR1-223ENST00000324771 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
DDR1-223ENST00000324771 KRTAP5-4Q6L8H1 288 aa2.54□□□□□ -2
DDR1-223ENST00000324771 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
DDR1-223ENST00000324771 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
DDR1-223ENST00000324771 KRTAP4-12Q9BQ66 201 aa2.48□□□□□ -2.01
DDR1-223ENST00000324771 KRTAP4-2Q9BYR5 136 aa2.48□□□□□ -2.01
DDR1-223ENST00000324771 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
DDR1-223ENST00000324771 KRTAP9-9Q9BYP9 154 aa2.41□□□□□ -2.02
DDR1-223ENST00000324771 KRTAP5-3Q6L8H2 238 aa2.34□□□□□ -2.03
DDR1-223ENST00000324771 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
DDR1-223ENST00000324771 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
DDR1-223ENST00000324771 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
DDR1-223ENST00000324771 KRTAP5-10Q6L8G5 202 aa2.14□□□□□ -2.07
DDR1-223ENST00000324771 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
DDR1-223ENST00000324771 AHNAKQ09666 5890 aaKnown RBP2.05□□□□□ -2.08
DDR1-223ENST00000324771 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
DDR1-223ENST00000324771 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.11
DDR1-223ENST00000324771 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
DDR1-223ENST00000324771 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
DDR1-223ENST00000324771 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
DDR1-223ENST00000324771 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
DDR1-223ENST00000324771 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 67 ms