RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 KRTAP2-4Q9BYR9 128 aa6.72□□□□□ -1.33
CRLF3-201ENST00000324238 KRTAP2-1Q9BYU5 128 aa6.72□□□□□ -1.33
CRLF3-201ENST00000324238 LOC100996750A0A140TA64 210 aa6.71□□□□□ -1.34
CRLF3-201ENST00000324238 CRCT1Q9UGL9 99 aa6.67□□□□□ -1.34
CRLF3-201ENST00000324238 KRTAP19-6Q3LI70 58 aa6.57□□□□□ -1.36
CRLF3-201ENST00000324238 MT1GP13640 62 aa6.56□□□□□ -1.36
CRLF3-201ENST00000324238 LCE2DQ5TA82 110 aaPredicted RBP6.51□□□□□ -1.37
CRLF3-201ENST00000324238 MACF1Q9UPN3 7388 aaKnown RBP6.47□□□□□ -1.37
CRLF3-201ENST00000324238 SYNE1Q8NF91 8797 aaKnown RBP6.45□□□□□ -1.38
CRLF3-201ENST00000324238 SYNE2Q8WXH0 6885 aaKnown RBP6.42□□□□□ -1.38
CRLF3-201ENST00000324238 MT1MQ8N339 61 aa6.34□□□□□ -1.39
CRLF3-201ENST00000324238 SPRR2FQ96RM1 72 aa6.33□□□□□ -1.4
CRLF3-201ENST00000324238 MDN1Q9NU22 5596 aa6.32□□□□□ -1.4
CRLF3-201ENST00000324238 KRTAP19-3Q7Z4W3 81 aa6.32□□□□□ -1.4
CRLF3-201ENST00000324238 KRTAP19-4Q3LI73 84 aa6.28□□□□□ -1.4
CRLF3-201ENST00000324238 OBSCNQ5VST9 7968 aa6.22□□□□□ -1.41
CRLF3-201ENST00000324238 KRTAP12-4P60329 112 aa6.18□□□□□ -1.42
CRLF3-201ENST00000324238 KRTAP4-9Q9BYQ8 210 aa6.15□□□□□ -1.43
CRLF3-201ENST00000324238 LCE3BQ5TA77 95 aa6.13□□□□□ -1.43
CRLF3-201ENST00000324238 LCE5AQ5TCM9 118 aa6.07□□□□□ -1.44
CRLF3-201ENST00000324238 KRTAP6-1Q3LI64 71 aa5.88□□□□□ -1.47
CRLF3-201ENST00000324238 KRTAP9-2Q9BYQ4 174 aa5.82□□□□□ -1.48
CRLF3-201ENST00000324238 LCE1AQ5T7P2 110 aa5.74□□□□□ -1.49
CRLF3-201ENST00000324238 SPRR2EP22531 72 aa5.71□□□□□ -1.5
CRLF3-201ENST00000324238 SPRR2BP35325 72 aa5.71□□□□□ -1.5
CRLF3-201ENST00000324238 SPRR2AP35326 72 aa5.71□□□□□ -1.5
CRLF3-201ENST00000324238 KRTAP9-7A8MTY7 169 aa5.64□□□□□ -1.51
CRLF3-201ENST00000324238 LCE3DQ9BYE3 92 aa5.64□□□□□ -1.51
CRLF3-201ENST00000324238 MT1AP04731 61 aa5.61□□□□□ -1.51
CRLF3-201ENST00000324238 LCE3EQ5T5B0 92 aa5.55□□□□□ -1.52
CRLF3-201ENST00000324238 KRTAP5-9P26371 169 aa5.52□□□□□ -1.53
CRLF3-201ENST00000324238 KRTAP5-5Q701N2 237 aaPredicted RBP5.52□□□□□ -1.53
CRLF3-201ENST00000324238 PRM1P04553 51 aa5.5□□□□□ -1.53
CRLF3-201ENST00000324238 SPRR2DP22532 72 aa5.43□□□□□ -1.54
CRLF3-201ENST00000324238 KRTAP9-4Q9BYQ2 154 aa5.3□□□□□ -1.56
CRLF3-201ENST00000324238 KRTAP6-2Q3LI66 62 aa5.28□□□□□ -1.56
CRLF3-201ENST00000324238 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.2□□□□□ -1.58
CRLF3-201ENST00000324238 KRTAP6-3Q3LI67 103 aa5.07□□□□□ -1.6
CRLF3-201ENST00000324238 MT3P25713 68 aa5.06□□□□□ -1.6
CRLF3-201ENST00000324238 KRTAP9-6A0A140TA67 174 aa5.05□□□□□ -1.6
CRLF3-201ENST00000324238 MT4P47944 62 aa5□□□□□ -1.61
CRLF3-201ENST00000324238 KRTAP4-6Q9BYQ5 205 aa4.96□□□□□ -1.62
CRLF3-201ENST00000324238 NEBP20929 6669 aa4.94□□□□□ -1.62
CRLF3-201ENST00000324238 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
CRLF3-201ENST00000324238 KRTAP2-2Q9BYT5 123 aa4.75□□□□□ -1.65
CRLF3-201ENST00000324238 KRTAP5-4Q6L8H1 288 aa4.74□□□□□ -1.65
CRLF3-201ENST00000324238 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
CRLF3-201ENST00000324238 LCE1DQ5T752 114 aa4.53□□□□□ -1.68
CRLF3-201ENST00000324238 MUC5ACP98088 5654 aa4.49□□□□□ -1.69
CRLF3-201ENST00000324238 LCE4AQ5TA78 99 aa4.43□□□□□ -1.7
CRLF3-201ENST00000324238 KRTAP5-2Q701N4 177 aa4.41□□□□□ -1.7
CRLF3-201ENST00000324238 LCE1BQ5T7P3 118 aa4.41□□□□□ -1.7
CRLF3-201ENST00000324238 KRTAP5-3Q6L8H2 238 aa4.31□□□□□ -1.72
CRLF3-201ENST00000324238 KRTAP20-1Q3LI63 56 aa4.23□□□□□ -1.73
CRLF3-201ENST00000324238 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
CRLF3-201ENST00000324238 KRTAP5-10Q6L8G5 202 aa4.07□□□□□ -1.76
CRLF3-201ENST00000324238 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
CRLF3-201ENST00000324238 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
CRLF3-201ENST00000324238 MUC19Q7Z5P9 8384 aa3.93□□□□□ -1.78
CRLF3-201ENST00000324238 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
CRLF3-201ENST00000324238 AHNAK2Q8IVF2 5795 aa3.82□□□□□ -1.8
CRLF3-201ENST00000324238 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
CRLF3-201ENST00000324238 MUC5BQ9HC84 5762 aaPredicted RBP3.77□□□□□ -1.81
CRLF3-201ENST00000324238 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
CRLF3-201ENST00000324238 KRTAP21-2Q3LI59 83 aa3.71□□□□□ -1.82
CRLF3-201ENST00000324238 KRTAP5-8O75690 187 aa3.63□□□□□ -1.83
CRLF3-201ENST00000324238 KRTAP4-12Q9BQ66 201 aa3.54□□□□□ -1.84
CRLF3-201ENST00000324238 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
CRLF3-201ENST00000324238 KRTAP5-7Q6L8G8 165 aa3.32□□□□□ -1.88
CRLF3-201ENST00000324238 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
CRLF3-201ENST00000324238 KRTAP21-1Q3LI58 79 aa3.29□□□□□ -1.88
CRLF3-201ENST00000324238 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
CRLF3-201ENST00000324238 KRTAP9-9Q9BYP9 154 aa3.1□□□□□ -1.91
CRLF3-201ENST00000324238 LCE1FQ5T754 118 aa3.03□□□□□ -1.93
CRLF3-201ENST00000324238 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
CRLF3-201ENST00000324238 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
CRLF3-201ENST00000324238 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 71.6 ms