RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
CD46-201ENST00000322875 USH2AO75445 5202 aa2.69□□□□□ -1.98
CD46-201ENST00000322875 KRTAP19-4Q3LI73 84 aa2.68□□□□□ -1.98
CD46-201ENST00000322875 KRTAP19-7Q3SYF9 63 aa2.67□□□□□ -1.98
CD46-201ENST00000322875 KRTAP9-9Q9BYP9 154 aa2.67□□□□□ -1.98
CD46-201ENST00000322875 KRTAP9-4Q9BYQ2 154 aa2.67□□□□□ -1.98
CD46-201ENST00000322875 SSPOA2VEC9 5147 aa2.66□□□□□ -1.98
CD46-201ENST00000322875 KRTAP6-3Q3LI67 103 aa2.63□□□□□ -1.99
CD46-201ENST00000322875 LCE3BQ5TA77 95 aa2.63□□□□□ -1.99
CD46-201ENST00000322875 FSIP2Q5CZC0 6907 aa2.63□□□□□ -1.99
CD46-201ENST00000322875 KRTAP4-9Q9BYQ8 210 aa2.62□□□□□ -1.99
CD46-201ENST00000322875 FCGBPQ9Y6R7 5405 aaPredicted RBP2.62□□□□□ -1.99
CD46-201ENST00000322875 MT1LQ93083 61 aa2.6□□□□□ -1.99
CD46-201ENST00000322875 KRTAP4-2Q9BYR5 136 aa2.6□□□□□ -1.99
CD46-201ENST00000322875 KMT2DO14686 5537 aa2.59□□□□□ -1.99
CD46-201ENST00000322875 LCE1DQ5T752 114 aa2.59□□□□□ -1.99
CD46-201ENST00000322875 KRTAP5-3Q6L8H2 238 aa2.59□□□□□ -2
CD46-201ENST00000322875 MT1EP04732 61 aa2.55□□□□□ -2
CD46-201ENST00000322875 KRTAP12-4P60329 112 aa2.51□□□□□ -2.01
CD46-201ENST00000322875 KRTAP5-9P26371 169 aa2.49□□□□□ -2.01
CD46-201ENST00000322875 MACF1Q9UPN3 7388 aaKnown RBP2.47□□□□□ -2.01
CD46-201ENST00000322875 HMCN1Q96RW7 5635 aa2.45□□□□□ -2.02
CD46-201ENST00000322875 KRTAP20-1Q3LI63 56 aa2.41□□□□□ -2.02
CD46-201ENST00000322875 KRTAP4-3Q9BYR4 195 aa2.41□□□□□ -2.02
CD46-201ENST00000322875 NEBP20929 6669 aa2.41□□□□□ -2.02
CD46-201ENST00000322875 KRTAP4-11Q9BYQ6 195 aa2.41□□□□□ -2.02
CD46-201ENST00000322875 MT1GP13640 62 aa2.4□□□□□ -2.02
CD46-201ENST00000322875 SYNE2Q8WXH0 6885 aaKnown RBP2.4□□□□□ -2.03
CD46-201ENST00000322875 MT1MQ8N339 61 aa2.36□□□□□ -2.03
CD46-201ENST00000322875 MT1AP04731 61 aa2.35□□□□□ -2.03
CD46-201ENST00000322875 LCE1AQ5T7P2 110 aa2.34□□□□□ -2.04
CD46-201ENST00000322875 SPRR2FQ96RM1 72 aa2.32□□□□□ -2.04
CD46-201ENST00000322875 SPRR2EP22531 72 aa2.32□□□□□ -2.04
CD46-201ENST00000322875 SPRR2BP35325 72 aa2.32□□□□□ -2.04
CD46-201ENST00000322875 SPRR2AP35326 72 aa2.32□□□□□ -2.04
CD46-201ENST00000322875 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
CD46-201ENST00000322875 KRTAP19-3Q7Z4W3 81 aa2.31□□□□□ -2.04
CD46-201ENST00000322875 KRTAP2-2Q9BYT5 123 aa2.3□□□□□ -2.04
CD46-201ENST00000322875 MUC12Q9UKN1 5478 aa2.29□□□□□ -2.04
CD46-201ENST00000322875 DSTQ03001 7570 aaKnown RBP2.27□□□□□ -2.05
CD46-201ENST00000322875 PRM1P04553 51 aa2.25□□□□□ -2.05
CD46-201ENST00000322875 SPRR2DP22532 72 aa2.25□□□□□ -2.05
CD46-201ENST00000322875 MDN1Q9NU22 5596 aa2.24□□□□□ -2.05
CD46-201ENST00000322875 LCE3EQ5T5B0 92 aa2.23□□□□□ -2.05
CD46-201ENST00000322875 LCE5AQ5TCM9 118 aa2.23□□□□□ -2.05
CD46-201ENST00000322875 LCE3DQ9BYE3 92 aa2.23□□□□□ -2.05
CD46-201ENST00000322875 KRTAP6-1Q3LI64 71 aa2.2□□□□□ -2.06
CD46-201ENST00000322875 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.07
CD46-201ENST00000322875 KRTAP6-2Q3LI66 62 aa2.13□□□□□ -2.07
CD46-201ENST00000322875 SYNE1Q8NF91 8797 aaKnown RBP2.11□□□□□ -2.07
CD46-201ENST00000322875 LCE4AQ5TA78 99 aa2.08□□□□□ -2.08
CD46-201ENST00000322875 OBSCNQ5VST9 7968 aa2.06□□□□□ -2.08
CD46-201ENST00000322875 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
CD46-201ENST00000322875 KRTAP5-4Q6L8H1 288 aa2□□□□□ -2.09
CD46-201ENST00000322875 GPR98Q8WXG9 6306 aa1.95□□□□□ -2.1
CD46-201ENST00000322875 MT4P47944 62 aa1.9□□□□□ -2.11
CD46-201ENST00000322875 MT3P25713 68 aa1.9□□□□□ -2.11
CD46-201ENST00000322875 LCE1EQ5T753 118 aa1.88□□□□□ -2.11
CD46-201ENST00000322875 KRTAP5-10Q6L8G5 202 aa1.88□□□□□ -2.11
CD46-201ENST00000322875 AHNAK2Q8IVF2 5795 aa1.87□□□□□ -2.11
CD46-201ENST00000322875 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
CD46-201ENST00000322875 KRTAP20-2Q3LI61 65 aa1.85□□□□□ -2.11
CD46-201ENST00000322875 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
CD46-201ENST00000322875 KRTAP5-2Q701N4 177 aa1.75□□□□□ -2.13
CD46-201ENST00000322875 KRTAP5-8O75690 187 aa1.64□□□□□ -2.15
CD46-201ENST00000322875 KRTAP5-1Q6L8H4 278 aa1.63□□□□□ -2.15
CD46-201ENST00000322875 MUC5ACP98088 5654 aa1.63□□□□□ -2.15
CD46-201ENST00000322875 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
CD46-201ENST00000322875 LCE1FQ5T754 118 aa1.6□□□□□ -2.15
CD46-201ENST00000322875 KRTAP5-11Q6L8G4 156 aa1.56□□□□□ -2.16
CD46-201ENST00000322875 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
CD46-201ENST00000322875 KRTAP4-4Q9BYR3 166 aa1.5□□□□□ -2.17
CD46-201ENST00000322875 LCE1CQ5T751 118 aa1.46□□□□□ -2.18
CD46-201ENST00000322875 LCE1BQ5T7P3 118 aa1.46□□□□□ -2.18
CD46-201ENST00000322875 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
CD46-201ENST00000322875 PHGR1C9JFL3 82 aa1.09□□□□□ -2.24
CD46-201ENST00000322875 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms