RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 LOC100996750A0A140TA64 210 aa5.14□□□□□ -1.59
VARS2-201ENST00000321897 LCE3BQ5TA77 95 aa5.13□□□□□ -1.59
VARS2-201ENST00000321897 LCE2AQ5TA79 106 aaPredicted RBP5.12□□□□□ -1.59
VARS2-201ENST00000321897 MT1LQ93083 61 aa5.09□□□□□ -1.59
VARS2-201ENST00000321897 MT1EP04732 61 aa5.07□□□□□ -1.6
VARS2-201ENST00000321897 KRTAP19-7Q3SYF9 63 aa5.06□□□□□ -1.6
VARS2-201ENST00000321897 KRTAP9-6A8MVA2 160 aa5.01□□□□□ -1.61
VARS2-201ENST00000321897 SSPOA2VEC9 5147 aa4.96□□□□□ -1.62
VARS2-201ENST00000321897 KRTAP19-3Q7Z4W3 81 aa4.9□□□□□ -1.63
VARS2-201ENST00000321897 SPRR2EP22531 72 aa4.87□□□□□ -1.63
VARS2-201ENST00000321897 SPRR2BP35325 72 aa4.87□□□□□ -1.63
VARS2-201ENST00000321897 SPRR2AP35326 72 aa4.87□□□□□ -1.63
VARS2-201ENST00000321897 MT1MQ8N339 61 aa4.83□□□□□ -1.64
VARS2-201ENST00000321897 KRTAP19-6Q3LI70 58 aa4.8□□□□□ -1.64
VARS2-201ENST00000321897 KRTAP2-3P0C7H8 128 aa4.8□□□□□ -1.64
VARS2-201ENST00000321897 KRTAP2-4Q9BYR9 128 aa4.8□□□□□ -1.64
VARS2-201ENST00000321897 KRTAP2-1Q9BYU5 128 aa4.8□□□□□ -1.64
VARS2-201ENST00000321897 KRTAP4-9Q9BYQ8 210 aa4.8□□□□□ -1.64
VARS2-201ENST00000321897 MACF1Q9UPN3 7388 aaKnown RBP4.79□□□□□ -1.64
VARS2-201ENST00000321897 LCE3DQ9BYE3 92 aa4.71□□□□□ -1.66
VARS2-201ENST00000321897 KRTAP19-4Q3LI73 84 aa4.7□□□□□ -1.66
VARS2-201ENST00000321897 LCE3EQ5T5B0 92 aa4.64□□□□□ -1.67
VARS2-201ENST00000321897 PRM1P04553 51 aa4.63□□□□□ -1.67
VARS2-201ENST00000321897 LCE2DQ5TA82 110 aaPredicted RBP4.63□□□□□ -1.67
VARS2-201ENST00000321897 SPRR2DP22532 72 aa4.63□□□□□ -1.67
VARS2-201ENST00000321897 KRTAP9-2Q9BYQ4 174 aa4.62□□□□□ -1.67
VARS2-201ENST00000321897 MDN1Q9NU22 5596 aa4.52□□□□□ -1.69
VARS2-201ENST00000321897 KRTAP6-1Q3LI64 71 aa4.43□□□□□ -1.7
VARS2-201ENST00000321897 KRTAP9-7A8MTY7 169 aa4.4□□□□□ -1.71
VARS2-201ENST00000321897 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
VARS2-201ENST00000321897 MT4P47944 62 aa4.37□□□□□ -1.71
VARS2-201ENST00000321897 LCE1AQ5T7P2 110 aa4.29□□□□□ -1.72
VARS2-201ENST00000321897 MT1AP04731 61 aa4.28□□□□□ -1.72
VARS2-201ENST00000321897 MT3P25713 68 aa4.18□□□□□ -1.74
VARS2-201ENST00000321897 KRTAP6-2Q3LI66 62 aa4.17□□□□□ -1.74
VARS2-201ENST00000321897 MUC19Q7Z5P9 8384 aa4.08□□□□□ -1.76
VARS2-201ENST00000321897 LCE1DQ5T752 114 aa4.08□□□□□ -1.76
VARS2-201ENST00000321897 KRTAP9-6A0A140TA67 174 aa4.05□□□□□ -1.76
VARS2-201ENST00000321897 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
VARS2-201ENST00000321897 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.03□□□□□ -1.76
VARS2-201ENST00000321897 KRTAP9-4Q9BYQ2 154 aa3.98□□□□□ -1.77
VARS2-201ENST00000321897 KRTAP6-3Q3LI67 103 aa3.87□□□□□ -1.79
VARS2-201ENST00000321897 KRTAP2-2Q9BYT5 123 aa3.82□□□□□ -1.8
VARS2-201ENST00000321897 KRTAP5-5Q701N2 237 aaPredicted RBP3.81□□□□□ -1.8
VARS2-201ENST00000321897 KRTAP5-9P26371 169 aa3.8□□□□□ -1.8
VARS2-201ENST00000321897 KRTAP4-6Q9BYQ5 205 aa3.8□□□□□ -1.8
VARS2-201ENST00000321897 NEBP20929 6669 aa3.78□□□□□ -1.8
VARS2-201ENST00000321897 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
VARS2-201ENST00000321897 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
VARS2-201ENST00000321897 KRTAP20-1Q3LI63 56 aa3.57□□□□□ -1.84
VARS2-201ENST00000321897 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
VARS2-201ENST00000321897 LCE4AQ5TA78 99 aa3.48□□□□□ -1.85
VARS2-201ENST00000321897 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
VARS2-201ENST00000321897 HMCN1Q96RW7 5635 aa3.43□□□□□ -1.86
VARS2-201ENST00000321897 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
VARS2-201ENST00000321897 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
VARS2-201ENST00000321897 KRTAP4-12Q9BQ66 201 aa3.12□□□□□ -1.91
VARS2-201ENST00000321897 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
VARS2-201ENST00000321897 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
VARS2-201ENST00000321897 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
VARS2-201ENST00000321897 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
VARS2-201ENST00000321897 AHNAK2Q8IVF2 5795 aa2.96□□□□□ -1.94
VARS2-201ENST00000321897 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
VARS2-201ENST00000321897 KRTAP5-3Q6L8H2 238 aa2.84□□□□□ -1.95
VARS2-201ENST00000321897 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
VARS2-201ENST00000321897 KRTAP9-9Q9BYP9 154 aa2.83□□□□□ -1.96
VARS2-201ENST00000321897 KRTAP5-10Q6L8G5 202 aa2.8□□□□□ -1.96
VARS2-201ENST00000321897 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
VARS2-201ENST00000321897 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
VARS2-201ENST00000321897 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
VARS2-201ENST00000321897 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
VARS2-201ENST00000321897 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
VARS2-201ENST00000321897 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
VARS2-201ENST00000321897 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.14□□□□□ -2.07
VARS2-201ENST00000321897 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
VARS2-201ENST00000321897 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
VARS2-201ENST00000321897 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 80 ms