RNA–Protein interactions for RNA: ENST00000321797.12

LMO7-201, Transcript of LIM domain 7, humanhuman

TSL 5 BASIC

Gene LMO7, Length 5,647 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-201ENST00000321797 KRTAP2-3P0C7H8 128 aa3.28□□□□□ -1.88
LMO7-201ENST00000321797 KRTAP2-4Q9BYR9 128 aa3.28□□□□□ -1.88
LMO7-201ENST00000321797 MT1XP80297 61 aa3.27□□□□□ -1.89
LMO7-201ENST00000321797 MUC17Q685J3 4493 aa3.26□□□□□ -1.89
LMO7-201ENST00000321797 PRM1P04553 51 aa3.25□□□□□ -1.89
LMO7-201ENST00000321797 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
LMO7-201ENST00000321797 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
LMO7-201ENST00000321797 KRTAP4-8A0A0G2JLE6 195 aa3.19□□□□□ -1.9
LMO7-201ENST00000321797 KRTAP4-8Q9BYQ9 185 aa3.19□□□□□ -1.9
LMO7-201ENST00000321797 KRTAP19-3Q7Z4W3 81 aa3.17□□□□□ -1.9
LMO7-201ENST00000321797 FLGP20930 4061 aaPredicted RBP3.16□□□□□ -1.9
LMO7-201ENST00000321797 KRTAP4-7Q9BYR0 210 aa3.15□□□□□ -1.91
LMO7-201ENST00000321797 LCE1AQ5T7P2 110 aa3.15□□□□□ -1.91
LMO7-201ENST00000321797 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.91
LMO7-201ENST00000321797 KRTAP2-1Q9BYU5 128 aa3.15□□□□□ -1.91
LMO7-201ENST00000321797 SYNE2Q8WXH0 6885 aaKnown RBP3.15□□□□□ -1.91
LMO7-201ENST00000321797 MT4P47944 62 aa3.05□□□□□ -1.92
LMO7-201ENST00000321797 MT1EP04732 61 aa3.01□□□□□ -1.93
LMO7-201ENST00000321797 LCE4AQ5TA78 99 aa2.99□□□□□ -1.93
LMO7-201ENST00000321797 MT1LQ93083 61 aa2.95□□□□□ -1.94
LMO7-201ENST00000321797 LOC100996750A0A140TA64 210 aa2.94□□□□□ -1.94
LMO7-201ENST00000321797 MT1MQ8N339 61 aa2.94□□□□□ -1.94
LMO7-201ENST00000321797 KRTAP4-9Q9BYQ8 210 aa2.92□□□□□ -1.94
LMO7-201ENST00000321797 USH2AO75445 5202 aa2.92□□□□□ -1.94
LMO7-201ENST00000321797 NEBP20929 6669 aa2.9□□□□□ -1.94
LMO7-201ENST00000321797 SYNE1Q8NF91 8797 aaKnown RBP2.86□□□□□ -1.95
LMO7-201ENST00000321797 KRTAP9-6A8MVA2 160 aa2.86□□□□□ -1.95
LMO7-201ENST00000321797 MT3P25713 68 aa2.85□□□□□ -1.95
LMO7-201ENST00000321797 KRTAP5-9P26371 169 aa2.82□□□□□ -1.96
LMO7-201ENST00000321797 KRTAP4-3Q9BYR4 195 aa2.81□□□□□ -1.96
LMO7-201ENST00000321797 SSPOA2VEC9 5147 aa2.81□□□□□ -1.96
LMO7-201ENST00000321797 MACF1Q9UPN3 7388 aaKnown RBP2.79□□□□□ -1.96
LMO7-201ENST00000321797 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
LMO7-201ENST00000321797 KRTAP19-7Q3SYF9 63 aa2.75□□□□□ -1.97
LMO7-201ENST00000321797 KMT2DO14686 5537 aa2.74□□□□□ -1.97
LMO7-201ENST00000321797 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
LMO7-201ENST00000321797 LCE5AQ5TCM9 118 aa2.73□□□□□ -1.97
LMO7-201ENST00000321797 LCE1EQ5T753 118 aa2.72□□□□□ -1.97
LMO7-201ENST00000321797 DSTQ03001 7570 aaKnown RBP2.71□□□□□ -1.98
LMO7-201ENST00000321797 MT1AP04731 61 aa2.71□□□□□ -1.98
LMO7-201ENST00000321797 FCGBPQ9Y6R7 5405 aaPredicted RBP2.71□□□□□ -1.98
LMO7-201ENST00000321797 GPR98Q8WXG9 6306 aa2.7□□□□□ -1.98
LMO7-201ENST00000321797 LCE1DQ5T752 114 aa2.64□□□□□ -1.99
LMO7-201ENST00000321797 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
LMO7-201ENST00000321797 KRTAP9-9Q9BYP9 154 aa2.58□□□□□ -2
LMO7-201ENST00000321797 MUC12Q9UKN1 5478 aa2.58□□□□□ -2
LMO7-201ENST00000321797 KRTAP9-4Q9BYQ2 154 aa2.51□□□□□ -2.01
LMO7-201ENST00000321797 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
LMO7-201ENST00000321797 MDN1Q9NU22 5596 aa2.47□□□□□ -2.01
LMO7-201ENST00000321797 LCE1FQ5T754 118 aa2.41□□□□□ -2.02
LMO7-201ENST00000321797 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
LMO7-201ENST00000321797 KRTAP4-11Q9BYQ6 195 aa2.39□□□□□ -2.03
LMO7-201ENST00000321797 KRTAP5-4Q6L8H1 288 aa2.39□□□□□ -2.03
LMO7-201ENST00000321797 KRTAP4-6Q9BYQ5 205 aa2.37□□□□□ -2.03
LMO7-201ENST00000321797 KRTAP5-5Q701N2 237 aaPredicted RBP2.31□□□□□ -2.04
LMO7-201ENST00000321797 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
LMO7-201ENST00000321797 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.04
LMO7-201ENST00000321797 KRTAP5-3Q6L8H2 238 aa2.25□□□□□ -2.05
LMO7-201ENST00000321797 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
LMO7-201ENST00000321797 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
LMO7-201ENST00000321797 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
LMO7-201ENST00000321797 KRTAP4-12Q9BQ66 201 aa1.98□□□□□ -2.09
LMO7-201ENST00000321797 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
LMO7-201ENST00000321797 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
LMO7-201ENST00000321797 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
LMO7-201ENST00000321797 KRTAP4-2Q9BYR5 136 aa1.94□□□□□ -2.1
LMO7-201ENST00000321797 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
LMO7-201ENST00000321797 KRTAP5-10Q6L8G5 202 aa1.89□□□□□ -2.11
LMO7-201ENST00000321797 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
LMO7-201ENST00000321797 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
LMO7-201ENST00000321797 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
LMO7-201ENST00000321797 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.67□□□□□ -2.14
LMO7-201ENST00000321797 KRTAP5-1Q6L8H4 278 aa1.6□□□□□ -2.15
LMO7-201ENST00000321797 KRTAP5-11Q6L8G4 156 aa1.59□□□□□ -2.16
LMO7-201ENST00000321797 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
LMO7-201ENST00000321797 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
LMO7-201ENST00000321797 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 91.5 ms