RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 TNXBP22105 4242 aa2.88□□□□□ -1.95
SSBP2-201ENST00000320672 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
SSBP2-201ENST00000320672 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
SSBP2-201ENST00000320672 SYNE2Q8WXH0 6885 aaKnown RBP2.81□□□□□ -1.96
SSBP2-201ENST00000320672 MT1LQ93083 61 aa2.81□□□□□ -1.96
SSBP2-201ENST00000320672 PRM1P04553 51 aa2.81□□□□□ -1.96
SSBP2-201ENST00000320672 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
SSBP2-201ENST00000320672 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
SSBP2-201ENST00000320672 LCE1DQ5T752 114 aa2.8□□□□□ -1.96
SSBP2-201ENST00000320672 KRTAP19-3Q7Z4W3 81 aa2.8□□□□□ -1.96
SSBP2-201ENST00000320672 MT1EP04732 61 aa2.77□□□□□ -1.97
SSBP2-201ENST00000320672 USH2AO75445 5202 aa2.76□□□□□ -1.97
SSBP2-201ENST00000320672 KRTAP9-2Q9BYQ4 174 aa2.74□□□□□ -1.97
SSBP2-201ENST00000320672 MT1MQ8N339 61 aa2.72□□□□□ -1.97
SSBP2-201ENST00000320672 LCE5AQ5TCM9 118 aa2.64□□□□□ -1.99
SSBP2-201ENST00000320672 FCGBPQ9Y6R7 5405 aaPredicted RBP2.63□□□□□ -1.99
SSBP2-201ENST00000320672 KRTAP19-6Q3LI70 58 aa2.61□□□□□ -1.99
SSBP2-201ENST00000320672 KMT2DO14686 5537 aa2.6□□□□□ -1.99
SSBP2-201ENST00000320672 KRTAP19-7Q3SYF9 63 aa2.6□□□□□ -1.99
SSBP2-201ENST00000320672 MT3P25713 68 aa2.6□□□□□ -1.99
SSBP2-201ENST00000320672 KRTAP9-6A8MVA2 160 aa2.58□□□□□ -2
SSBP2-201ENST00000320672 DSTQ03001 7570 aaKnown RBP2.55□□□□□ -2
SSBP2-201ENST00000320672 FLGP20930 4061 aaPredicted RBP2.55□□□□□ -2
SSBP2-201ENST00000320672 SSPOA2VEC9 5147 aa2.52□□□□□ -2.01
SSBP2-201ENST00000320672 KRTAP9-6A0A140TA67 174 aa2.52□□□□□ -2.01
SSBP2-201ENST00000320672 KRTAP19-4Q3LI73 84 aa2.51□□□□□ -2.01
SSBP2-201ENST00000320672 LCE2AQ5TA79 106 aaPredicted RBP2.5□□□□□ -2.01
SSBP2-201ENST00000320672 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
SSBP2-201ENST00000320672 KRTAP6-2Q3LI66 62 aa2.49□□□□□ -2.01
SSBP2-201ENST00000320672 KRTAP9-7A8MTY7 169 aa2.48□□□□□ -2.01
SSBP2-201ENST00000320672 KRTAP2-3P0C7H8 128 aa2.48□□□□□ -2.01
SSBP2-201ENST00000320672 KRTAP2-4Q9BYR9 128 aa2.48□□□□□ -2.01
SSBP2-201ENST00000320672 KRTAP2-1Q9BYU5 128 aa2.48□□□□□ -2.01
SSBP2-201ENST00000320672 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
SSBP2-201ENST00000320672 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
SSBP2-201ENST00000320672 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
SSBP2-201ENST00000320672 LCE1AQ5T7P2 110 aa2.44□□□□□ -2.02
SSBP2-201ENST00000320672 MT1AP04731 61 aa2.42□□□□□ -2.02
SSBP2-201ENST00000320672 KRTAP20-1Q3LI63 56 aa2.41□□□□□ -2.02
SSBP2-201ENST00000320672 MUC12Q9UKN1 5478 aa2.41□□□□□ -2.02
SSBP2-201ENST00000320672 MACF1Q9UPN3 7388 aaKnown RBP2.37□□□□□ -2.03
SSBP2-201ENST00000320672 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.3□□□□□ -2.04
SSBP2-201ENST00000320672 KRTAP9-4Q9BYQ2 154 aa2.3□□□□□ -2.04
SSBP2-201ENST00000320672 LCE4AQ5TA78 99 aa2.27□□□□□ -2.05
SSBP2-201ENST00000320672 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
SSBP2-201ENST00000320672 KRTAP4-11Q9BYQ6 195 aa2.21□□□□□ -2.06
SSBP2-201ENST00000320672 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
SSBP2-201ENST00000320672 KRTAP6-3Q3LI67 103 aa2.18□□□□□ -2.06
SSBP2-201ENST00000320672 KRTAP4-6Q9BYQ5 205 aa2.17□□□□□ -2.06
SSBP2-201ENST00000320672 KRTAP2-2Q9BYT5 123 aa2.16□□□□□ -2.06
SSBP2-201ENST00000320672 KRTAP4-12Q9BQ66 201 aa2.15□□□□□ -2.06
SSBP2-201ENST00000320672 KRTAP4-2Q9BYR5 136 aa2.15□□□□□ -2.06
SSBP2-201ENST00000320672 MDN1Q9NU22 5596 aa2.14□□□□□ -2.07
SSBP2-201ENST00000320672 KRTAP20-2Q3LI61 65 aa2.08□□□□□ -2.08
SSBP2-201ENST00000320672 KRTAP9-9Q9BYP9 154 aa1.98□□□□□ -2.09
SSBP2-201ENST00000320672 NEBP20929 6669 aa1.98□□□□□ -2.09
SSBP2-201ENST00000320672 KRTAP5-5Q701N2 237 aaPredicted RBP1.91□□□□□ -2.1
SSBP2-201ENST00000320672 KRTAP5-9P26371 169 aa1.85□□□□□ -2.11
SSBP2-201ENST00000320672 MUC5ACP98088 5654 aa1.78□□□□□ -2.13
SSBP2-201ENST00000320672 HMCN1Q96RW7 5635 aa1.73□□□□□ -2.13
SSBP2-201ENST00000320672 GPR98Q8WXG9 6306 aa1.73□□□□□ -2.13
SSBP2-201ENST00000320672 KRTAP5-4Q6L8H1 288 aa1.6□□□□□ -2.15
SSBP2-201ENST00000320672 AHNAK2Q8IVF2 5795 aa1.54□□□□□ -2.16
SSBP2-201ENST00000320672 KRTAP5-3Q6L8H2 238 aa1.53□□□□□ -2.16
SSBP2-201ENST00000320672 KRTAP5-8O75690 187 aa1.49□□□□□ -2.17
SSBP2-201ENST00000320672 KRTAP5-10Q6L8G5 202 aa1.43□□□□□ -2.18
SSBP2-201ENST00000320672 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
SSBP2-201ENST00000320672 KRTAP5-2Q701N4 177 aa1.41□□□□□ -2.18
SSBP2-201ENST00000320672 MUC5BQ9HC84 5762 aaPredicted RBP1.38□□□□□ -2.19
SSBP2-201ENST00000320672 KRTAP5-1Q6L8H4 278 aa1.29□□□□□ -2.2
SSBP2-201ENST00000320672 KRTAP21-2Q3LI59 83 aa1.24□□□□□ -2.21
SSBP2-201ENST00000320672 AHNAKQ09666 5890 aaKnown RBP1.24□□□□□ -2.21
SSBP2-201ENST00000320672 KRTAP5-11Q6L8G4 156 aa1.12□□□□□ -2.23
SSBP2-201ENST00000320672 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
SSBP2-201ENST00000320672 KRTAP5-7Q6L8G8 165 aa1.04□□□□□ -2.24
SSBP2-201ENST00000320672 KRTAP5-6Q6L8G9 129 aaPredicted RBP1□□□□□ -2.25
SSBP2-201ENST00000320672 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 12.7 ms