RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
CLIP4-201ENST00000320081 SPRR2EP22531 72 aa5.47□□□□□ -1.53
CLIP4-201ENST00000320081 SPRR2BP35325 72 aa5.47□□□□□ -1.53
CLIP4-201ENST00000320081 SPRR2AP35326 72 aa5.47□□□□□ -1.53
CLIP4-201ENST00000320081 MT1LQ93083 61 aa5.47□□□□□ -1.53
CLIP4-201ENST00000320081 MT1EP04732 61 aa5.43□□□□□ -1.54
CLIP4-201ENST00000320081 KRTAP19-3Q7Z4W3 81 aa5.34□□□□□ -1.55
CLIP4-201ENST00000320081 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
CLIP4-201ENST00000320081 LCE2AQ5TA79 106 aaPredicted RBP5.31□□□□□ -1.56
CLIP4-201ENST00000320081 MUC12Q9UKN1 5478 aa5.28□□□□□ -1.56
CLIP4-201ENST00000320081 SPRR2DP22532 72 aa5.22□□□□□ -1.57
CLIP4-201ENST00000320081 MACF1Q9UPN3 7388 aaKnown RBP5.22□□□□□ -1.57
CLIP4-201ENST00000320081 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.57
CLIP4-201ENST00000320081 MT1MQ8N339 61 aa5.21□□□□□ -1.57
CLIP4-201ENST00000320081 KRTAP9-6A8MVA2 160 aa5.2□□□□□ -1.58
CLIP4-201ENST00000320081 LCE3DQ9BYE3 92 aa5.19□□□□□ -1.58
CLIP4-201ENST00000320081 KRTAP4-9Q9BYQ8 210 aa5.17□□□□□ -1.58
CLIP4-201ENST00000320081 KRTAP19-6Q3LI70 58 aa5.12□□□□□ -1.59
CLIP4-201ENST00000320081 SSPOA2VEC9 5147 aa5.07□□□□□ -1.6
CLIP4-201ENST00000320081 LCE3EQ5T5B0 92 aa5.06□□□□□ -1.6
CLIP4-201ENST00000320081 KRTAP9-2Q9BYQ4 174 aa5.02□□□□□ -1.61
CLIP4-201ENST00000320081 KRTAP2-3P0C7H8 128 aa5.02□□□□□ -1.61
CLIP4-201ENST00000320081 KRTAP2-4Q9BYR9 128 aa5.02□□□□□ -1.61
CLIP4-201ENST00000320081 KRTAP2-1Q9BYU5 128 aa5.02□□□□□ -1.61
CLIP4-201ENST00000320081 MT4P47944 62 aa4.91□□□□□ -1.62
CLIP4-201ENST00000320081 PRM1P04553 51 aa4.86□□□□□ -1.63
CLIP4-201ENST00000320081 LCE2DQ5TA82 110 aaPredicted RBP4.8□□□□□ -1.64
CLIP4-201ENST00000320081 KRTAP6-1Q3LI64 71 aa4.74□□□□□ -1.65
CLIP4-201ENST00000320081 MUC19Q7Z5P9 8384 aa4.73□□□□□ -1.65
CLIP4-201ENST00000320081 MDN1Q9NU22 5596 aa4.72□□□□□ -1.65
CLIP4-201ENST00000320081 MT3P25713 68 aa4.7□□□□□ -1.66
CLIP4-201ENST00000320081 MT1AP04731 61 aa4.66□□□□□ -1.66
CLIP4-201ENST00000320081 LCE1DQ5T752 114 aa4.64□□□□□ -1.67
CLIP4-201ENST00000320081 LCE5AQ5TCM9 118 aa4.64□□□□□ -1.67
CLIP4-201ENST00000320081 LCE1BQ5T7P3 118 aa4.64□□□□□ -1.67
CLIP4-201ENST00000320081 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
CLIP4-201ENST00000320081 KRTAP6-2Q3LI66 62 aa4.54□□□□□ -1.68
CLIP4-201ENST00000320081 KRTAP9-7A8MTY7 169 aa4.53□□□□□ -1.68
CLIP4-201ENST00000320081 KRTAP9-6A0A140TA67 174 aa4.46□□□□□ -1.7
CLIP4-201ENST00000320081 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.35□□□□□ -1.71
CLIP4-201ENST00000320081 KRTAP9-4Q9BYQ2 154 aa4.3□□□□□ -1.72
CLIP4-201ENST00000320081 KRTAP6-3Q3LI67 103 aa4.21□□□□□ -1.74
CLIP4-201ENST00000320081 NEBP20929 6669 aa4.11□□□□□ -1.75
CLIP4-201ENST00000320081 KRTAP4-6Q9BYQ5 205 aa4.05□□□□□ -1.76
CLIP4-201ENST00000320081 KRTAP20-1Q3LI63 56 aa4.02□□□□□ -1.77
CLIP4-201ENST00000320081 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
CLIP4-201ENST00000320081 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
CLIP4-201ENST00000320081 KRTAP2-2Q9BYT5 123 aa3.92□□□□□ -1.78
CLIP4-201ENST00000320081 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
CLIP4-201ENST00000320081 LCE4AQ5TA78 99 aa3.87□□□□□ -1.79
CLIP4-201ENST00000320081 HMCN1Q96RW7 5635 aa3.78□□□□□ -1.8
CLIP4-201ENST00000320081 GPR98Q8WXG9 6306 aa3.77□□□□□ -1.81
CLIP4-201ENST00000320081 KRTAP4-11Q9BYQ6 195 aa3.75□□□□□ -1.81
CLIP4-201ENST00000320081 KRTAP20-2Q3LI61 65 aa3.71□□□□□ -1.82
CLIP4-201ENST00000320081 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
CLIP4-201ENST00000320081 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
CLIP4-201ENST00000320081 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
CLIP4-201ENST00000320081 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.84
CLIP4-201ENST00000320081 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
CLIP4-201ENST00000320081 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
CLIP4-201ENST00000320081 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.88
CLIP4-201ENST00000320081 AHNAK2Q8IVF2 5795 aa3.27□□□□□ -1.89
CLIP4-201ENST00000320081 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
CLIP4-201ENST00000320081 KRTAP5-3Q6L8H2 238 aa3.01□□□□□ -1.93
CLIP4-201ENST00000320081 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
CLIP4-201ENST00000320081 KRTAP5-10Q6L8G5 202 aa2.93□□□□□ -1.94
CLIP4-201ENST00000320081 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
CLIP4-201ENST00000320081 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
CLIP4-201ENST00000320081 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
CLIP4-201ENST00000320081 KRTAP5-1Q6L8H4 278 aa2.67□□□□□ -1.98
CLIP4-201ENST00000320081 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
CLIP4-201ENST00000320081 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
CLIP4-201ENST00000320081 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
CLIP4-201ENST00000320081 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
CLIP4-201ENST00000320081 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.19□□□□□ -2.06
CLIP4-201ENST00000320081 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
CLIP4-201ENST00000320081 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 111.5 ms