RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 LCE4AQ5TA78 99 aa3.63□□□□□ -1.83
AFF3-201ENST00000317233 MT1AP04731 61 aa3.62□□□□□ -1.83
AFF3-201ENST00000317233 LPAP08519 4548 aa3.61□□□□□ -1.83
AFF3-201ENST00000317233 HSPG2P98160 4391 aa3.61□□□□□ -1.83
AFF3-201ENST00000317233 KRTAP9-6A0A140TA67 174 aa3.61□□□□□ -1.83
AFF3-201ENST00000317233 KRTAP17-1Q9BYP8 105 aa3.61□□□□□ -1.83
AFF3-201ENST00000317233 KRTAP4-9Q9BYQ8 210 aa3.6□□□□□ -1.83
AFF3-201ENST00000317233 LRP2P98164 4655 aa3.55□□□□□ -1.84
AFF3-201ENST00000317233 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
AFF3-201ENST00000317233 KRTAP9-7A8MTY7 169 aa3.5□□□□□ -1.85
AFF3-201ENST00000317233 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
AFF3-201ENST00000317233 RYR3Q15413 4870 aa3.47□□□□□ -1.85
AFF3-201ENST00000317233 LCE2AQ5TA79 106 aaPredicted RBP3.45□□□□□ -1.86
AFF3-201ENST00000317233 KRTAP9-4Q9BYQ2 154 aa3.38□□□□□ -1.87
AFF3-201ENST00000317233 MUC17Q685J3 4493 aa3.37□□□□□ -1.87
AFF3-201ENST00000317233 KRTAP2-2Q9BYT5 123 aa3.36□□□□□ -1.87
AFF3-201ENST00000317233 HYDINQ4G0P3 5121 aa3.34□□□□□ -1.87
AFF3-201ENST00000317233 KRTAP19-2Q3LHN2 52 aa3.34□□□□□ -1.87
AFF3-201ENST00000317233 KRTAP19-7Q3SYF9 63 aa3.31□□□□□ -1.88
AFF3-201ENST00000317233 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
AFF3-201ENST00000317233 KMT2CQ8NEZ4 4911 aaKnown RBP3.28□□□□□ -1.89
AFF3-201ENST00000317233 KRTAP6-3Q3LI67 103 aa3.27□□□□□ -1.89
AFF3-201ENST00000317233 SYNE1Q8NF91 8797 aaKnown RBP3.23□□□□□ -1.89
AFF3-201ENST00000317233 KIAA1109Q2LD37 5005 aa3.22□□□□□ -1.89
AFF3-201ENST00000317233 FSIP2Q5CZC0 6907 aa3.19□□□□□ -1.9
AFF3-201ENST00000317233 RYR2Q92736 4967 aa3.18□□□□□ -1.9
AFF3-201ENST00000317233 KRTAP20-2Q3LI61 65 aa3.17□□□□□ -1.9
AFF3-201ENST00000317233 HERC2O95714 4834 aa3.17□□□□□ -1.9
AFF3-201ENST00000317233 PCLOQ9Y6V0 5065 aa3.15□□□□□ -1.91
AFF3-201ENST00000317233 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.12□□□□□ -1.91
AFF3-201ENST00000317233 KRTAP4-11Q9BYQ6 195 aa3.08□□□□□ -1.92
AFF3-201ENST00000317233 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
AFF3-201ENST00000317233 HMCN2Q8NDA2 5059 aa2.98□□□□□ -1.93
AFF3-201ENST00000317233 BIRC6Q9NR09 4857 aa2.97□□□□□ -1.93
AFF3-201ENST00000317233 HERC1Q15751 4861 aa2.95□□□□□ -1.94
AFF3-201ENST00000317233 EPPK1P58107 5090 aaKnown RBP2.87□□□□□ -1.95
AFF3-201ENST00000317233 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
AFF3-201ENST00000317233 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.96
AFF3-201ENST00000317233 MUC2Q02817 5179 aa2.84□□□□□ -1.96
AFF3-201ENST00000317233 KRTAP4-6Q9BYQ5 205 aa2.8□□□□□ -1.96
AFF3-201ENST00000317233 UBR4Q5T4S7 5183 aa2.77□□□□□ -1.97
AFF3-201ENST00000317233 KRTAP4-12Q9BQ66 201 aa2.77□□□□□ -1.97
AFF3-201ENST00000317233 KRTAP4-2Q9BYR5 136 aa2.77□□□□□ -1.97
AFF3-201ENST00000317233 FAT4Q6V0I7 4981 aa2.74□□□□□ -1.97
AFF3-201ENST00000317233 ABCA13Q86UQ4 5058 aa2.73□□□□□ -1.97
AFF3-201ENST00000317233 MACF1Q9UPN3 7388 aaKnown RBP2.7□□□□□ -1.98
AFF3-201ENST00000317233 RNF213Q63HN8 5207 aa2.64□□□□□ -1.99
AFF3-201ENST00000317233 KMT2DO14686 5537 aa2.64□□□□□ -1.99
AFF3-201ENST00000317233 DSTQ03001 7570 aaKnown RBP2.61□□□□□ -1.99
AFF3-201ENST00000317233 FCGBPQ9Y6R7 5405 aaPredicted RBP2.53□□□□□ -2.01
AFF3-201ENST00000317233 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
AFF3-201ENST00000317233 KRTAP5-4Q6L8H1 288 aa2.4□□□□□ -2.03
AFF3-201ENST00000317233 KRTAP5-9P26371 169 aa2.36□□□□□ -2.03
AFF3-201ENST00000317233 KRTAP5-5Q701N2 237 aaPredicted RBP2.35□□□□□ -2.03
AFF3-201ENST00000317233 USH2AO75445 5202 aa2.35□□□□□ -2.03
AFF3-201ENST00000317233 NEBP20929 6669 aa2.3□□□□□ -2.04
AFF3-201ENST00000317233 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
AFF3-201ENST00000317233 SSPOA2VEC9 5147 aa2.21□□□□□ -2.06
AFF3-201ENST00000317233 MUC12Q9UKN1 5478 aa2.21□□□□□ -2.06
AFF3-201ENST00000317233 MDN1Q9NU22 5596 aa2.18□□□□□ -2.06
AFF3-201ENST00000317233 KRTAP5-3Q6L8H2 238 aa2.05□□□□□ -2.08
AFF3-201ENST00000317233 GPR98Q8WXG9 6306 aa2.02□□□□□ -2.09
AFF3-201ENST00000317233 MUC5ACP98088 5654 aa1.95□□□□□ -2.1
AFF3-201ENST00000317233 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
AFF3-201ENST00000317233 KRTAP5-10Q6L8G5 202 aa1.83□□□□□ -2.12
AFF3-201ENST00000317233 KRTAP5-2Q701N4 177 aa1.78□□□□□ -2.12
AFF3-201ENST00000317233 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
AFF3-201ENST00000317233 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
AFF3-201ENST00000317233 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
AFF3-201ENST00000317233 KRTAP5-11Q6L8G4 156 aa1.58□□□□□ -2.16
AFF3-201ENST00000317233 KRTAP5-1Q6L8H4 278 aa1.57□□□□□ -2.16
AFF3-201ENST00000317233 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
AFF3-201ENST00000317233 AHNAK2Q8IVF2 5795 aa1.41□□□□□ -2.18
AFF3-201ENST00000317233 AHNAKQ09666 5890 aaKnown RBP1.37□□□□□ -2.19
AFF3-201ENST00000317233 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.36□□□□□ -2.19
AFF3-201ENST00000317233 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
AFF3-201ENST00000317233 KRTAP5-7Q6L8G8 165 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 458 ms