RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 KRTAP4-3Q9BYR4 195 aa8.52□□□□□ -1.05
HOXB3-201ENST00000311626 MUC12Q9UKN1 5478 aa8.49□□□□□ -1.05
HOXB3-201ENST00000311626 LOC100996750A0A140TA64 210 aa8.47□□□□□ -1.05
HOXB3-201ENST00000311626 LCE2DQ5TA82 110 aaPredicted RBP8.39□□□□□ -1.07
HOXB3-201ENST00000311626 KRTAP19-4Q3LI73 84 aa8.34□□□□□ -1.07
HOXB3-201ENST00000311626 MT1GP13640 62 aa8.33□□□□□ -1.08
HOXB3-201ENST00000311626 CRCT1Q9UGL9 99 aa8.28□□□□□ -1.08
HOXB3-201ENST00000311626 MT1MQ8N339 61 aa8.2□□□□□ -1.1
HOXB3-201ENST00000311626 DSTQ03001 7570 aaKnown RBP8.2□□□□□ -1.1
HOXB3-201ENST00000311626 KRTAP19-3Q7Z4W3 81 aa8.17□□□□□ -1.1
HOXB3-201ENST00000311626 SPRR2FQ96RM1 72 aa8□□□□□ -1.13
HOXB3-201ENST00000311626 MACF1Q9UPN3 7388 aaKnown RBP7.9□□□□□ -1.14
HOXB3-201ENST00000311626 LCE5AQ5TCM9 118 aa7.87□□□□□ -1.15
HOXB3-201ENST00000311626 LCE3BQ5TA77 95 aa7.71□□□□□ -1.18
HOXB3-201ENST00000311626 SYNE2Q8WXH0 6885 aaKnown RBP7.69□□□□□ -1.18
HOXB3-201ENST00000311626 KRTAP12-4P60329 112 aa7.68□□□□□ -1.18
HOXB3-201ENST00000311626 MDN1Q9NU22 5596 aa7.67□□□□□ -1.18
HOXB3-201ENST00000311626 KRTAP4-9Q9BYQ8 210 aa7.65□□□□□ -1.19
HOXB3-201ENST00000311626 KRTAP9-2Q9BYQ4 174 aa7.64□□□□□ -1.19
HOXB3-201ENST00000311626 SYNE1Q8NF91 8797 aaKnown RBP7.63□□□□□ -1.19
HOXB3-201ENST00000311626 KRTAP6-1Q3LI64 71 aa7.52□□□□□ -1.21
HOXB3-201ENST00000311626 LCE1AQ5T7P2 110 aa7.38□□□□□ -1.23
HOXB3-201ENST00000311626 MT1AP04731 61 aa7.3□□□□□ -1.24
HOXB3-201ENST00000311626 SPRR2EP22531 72 aa7.24□□□□□ -1.25
HOXB3-201ENST00000311626 SPRR2BP35325 72 aa7.24□□□□□ -1.25
HOXB3-201ENST00000311626 SPRR2AP35326 72 aa7.24□□□□□ -1.25
HOXB3-201ENST00000311626 KRTAP2-2Q9BYT5 123 aa7.23□□□□□ -1.25
HOXB3-201ENST00000311626 KRTAP5-9P26371 169 aa7.21□□□□□ -1.26
HOXB3-201ENST00000311626 KRTAP9-6A0A140TA67 174 aa7.18□□□□□ -1.26
HOXB3-201ENST00000311626 KRTAP5-5Q701N2 237 aaPredicted RBP7.17□□□□□ -1.26
HOXB3-201ENST00000311626 LCE3DQ9BYE3 92 aa7.14□□□□□ -1.27
HOXB3-201ENST00000311626 LCE3EQ5T5B0 92 aa7.02□□□□□ -1.29
HOXB3-201ENST00000311626 OBSCNQ5VST9 7968 aa7□□□□□ -1.29
HOXB3-201ENST00000311626 KRTAP9-7A8MTY7 169 aa6.98□□□□□ -1.29
HOXB3-201ENST00000311626 SPRR2DP22532 72 aa6.9□□□□□ -1.3
HOXB3-201ENST00000311626 KRTAP9-4Q9BYQ2 154 aa6.89□□□□□ -1.31
HOXB3-201ENST00000311626 PRM1P04553 51 aa6.81□□□□□ -1.32
HOXB3-201ENST00000311626 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.76□□□□□ -1.33
HOXB3-201ENST00000311626 KRTAP6-2Q3LI66 62 aa6.75□□□□□ -1.33
HOXB3-201ENST00000311626 KRTAP6-3Q3LI67 103 aa6.67□□□□□ -1.34
HOXB3-201ENST00000311626 LCE1EQ5T753 118 aa6.63□□□□□ -1.35
HOXB3-201ENST00000311626 MT3P25713 68 aa6.55□□□□□ -1.36
HOXB3-201ENST00000311626 LCE1FQ5T754 118 aa6.47□□□□□ -1.37
HOXB3-201ENST00000311626 LCE1DQ5T752 114 aa6.35□□□□□ -1.39
HOXB3-201ENST00000311626 KRTAP4-6Q9BYQ5 205 aa6.26□□□□□ -1.41
HOXB3-201ENST00000311626 KRTAP5-4Q6L8H1 288 aa6.25□□□□□ -1.41
HOXB3-201ENST00000311626 MT4P47944 62 aa6.23□□□□□ -1.41
HOXB3-201ENST00000311626 NEBP20929 6669 aa6.22□□□□□ -1.41
HOXB3-201ENST00000311626 KRTAP20-2Q3LI61 65 aa5.97□□□□□ -1.45
HOXB3-201ENST00000311626 HMCN1Q96RW7 5635 aa5.88□□□□□ -1.47
HOXB3-201ENST00000311626 KRTAP5-2Q701N4 177 aa5.84□□□□□ -1.47
HOXB3-201ENST00000311626 LCE4AQ5TA78 99 aa5.8□□□□□ -1.48
HOXB3-201ENST00000311626 KRTAP20-1Q3LI63 56 aa5.72□□□□□ -1.49
HOXB3-201ENST00000311626 MUC5ACP98088 5654 aa5.66□□□□□ -1.5
HOXB3-201ENST00000311626 KRTAP5-3Q6L8H2 238 aa5.64□□□□□ -1.51
HOXB3-201ENST00000311626 KRTAP9-9Q9BYP9 154 aa5.52□□□□□ -1.53
HOXB3-201ENST00000311626 LCE1BQ5T7P3 118 aa5.49□□□□□ -1.53
HOXB3-201ENST00000311626 KRTAP4-11Q9BYQ6 195 aa5.22□□□□□ -1.57
HOXB3-201ENST00000311626 KRTAP5-10Q6L8G5 202 aa5.2□□□□□ -1.58
HOXB3-201ENST00000311626 KRTAP4-2Q9BYR5 136 aa5.12□□□□□ -1.59
HOXB3-201ENST00000311626 KRTAP5-1Q6L8H4 278 aa5.08□□□□□ -1.6
HOXB3-201ENST00000311626 LCE1CQ5T751 118 aa5□□□□□ -1.61
HOXB3-201ENST00000311626 KRTAP21-2Q3LI59 83 aa4.8□□□□□ -1.64
HOXB3-201ENST00000311626 AHNAK2Q8IVF2 5795 aa4.74□□□□□ -1.65
HOXB3-201ENST00000311626 KRTAP5-8O75690 187 aa4.7□□□□□ -1.66
HOXB3-201ENST00000311626 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.65□□□□□ -1.67
HOXB3-201ENST00000311626 GPR98Q8WXG9 6306 aa4.64□□□□□ -1.67
HOXB3-201ENST00000311626 MUC19Q7Z5P9 8384 aa4.64□□□□□ -1.67
HOXB3-201ENST00000311626 KRTAP4-4Q9BYR3 166 aa4.61□□□□□ -1.67
HOXB3-201ENST00000311626 KRTAP5-7Q6L8G8 165 aa4.47□□□□□ -1.69
HOXB3-201ENST00000311626 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
HOXB3-201ENST00000311626 KRTAP4-12Q9BQ66 201 aa4.35□□□□□ -1.71
HOXB3-201ENST00000311626 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
HOXB3-201ENST00000311626 KRTAP21-1Q3LI58 79 aa4.16□□□□□ -1.74
HOXB3-201ENST00000311626 PHGR1C9JFL3 82 aa3.74□□□□□ -1.81
HOXB3-201ENST00000311626 AHNAKQ09666 5890 aaKnown RBP3.7□□□□□ -1.82
HOXB3-201ENST00000311626 MUC16Q8WXI7 14507 aa2.53□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms