RNA–Protein interactions for RNA: ENST00000310454.10

GPD2-201, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPD2, Length 6,041 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-201ENST00000310454 KRTAP2-1Q9BYU5 128 aa4.74□□□□□ -1.65
GPD2-201ENST00000310454 BIRC6Q9NR09 4857 aa4.74□□□□□ -1.65
GPD2-201ENST00000310454 PCLOQ9Y6V0 5065 aa4.73□□□□□ -1.65
GPD2-201ENST00000310454 LPAP08519 4548 aa4.72□□□□□ -1.65
GPD2-201ENST00000310454 KRTAP9-6A0A140TA67 174 aa4.7□□□□□ -1.66
GPD2-201ENST00000310454 KRTAP19-2Q3LHN2 52 aa4.68□□□□□ -1.66
GPD2-201ENST00000310454 MUC17Q685J3 4493 aa4.68□□□□□ -1.66
GPD2-201ENST00000310454 KRTAP20-1Q3LI63 56 aa4.65□□□□□ -1.67
GPD2-201ENST00000310454 KRTAP6-2Q3LI66 62 aa4.64□□□□□ -1.67
GPD2-201ENST00000310454 HYDINQ4G0P3 5121 aa4.62□□□□□ -1.67
GPD2-201ENST00000310454 EPPK1P58107 5090 aaKnown RBP4.6□□□□□ -1.67
GPD2-201ENST00000310454 KRTAP19-7Q3SYF9 63 aa4.59□□□□□ -1.67
GPD2-201ENST00000310454 PKHD1P08F94 4074 aa4.59□□□□□ -1.68
GPD2-201ENST00000310454 FLGP20930 4061 aaPredicted RBP4.55□□□□□ -1.68
GPD2-201ENST00000310454 TNXBP22105 4242 aa4.55□□□□□ -1.68
GPD2-201ENST00000310454 LCE1CQ5T751 118 aa4.54□□□□□ -1.68
GPD2-201ENST00000310454 LCE1EQ5T753 118 aa4.54□□□□□ -1.68
GPD2-201ENST00000310454 LCE1FQ5T754 118 aa4.54□□□□□ -1.68
GPD2-201ENST00000310454 LCE1AQ5T7P2 110 aa4.54□□□□□ -1.68
GPD2-201ENST00000310454 KMT2CQ8NEZ4 4911 aaKnown RBP4.51□□□□□ -1.69
GPD2-201ENST00000310454 KRTAP6-1Q3LI64 71 aa4.47□□□□□ -1.69
GPD2-201ENST00000310454 KRTAP9-4Q9BYQ2 154 aa4.46□□□□□ -1.7
GPD2-201ENST00000310454 KRTAP9-7A8MTY7 169 aa4.45□□□□□ -1.7
GPD2-201ENST00000310454 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
GPD2-201ENST00000310454 LCE2AQ5TA79 106 aaPredicted RBP4.37□□□□□ -1.71
GPD2-201ENST00000310454 KRTAP6-3Q3LI67 103 aa4.35□□□□□ -1.71
GPD2-201ENST00000310454 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
GPD2-201ENST00000310454 KRTAP9-6A8MVA2 160 aa4.27□□□□□ -1.73
GPD2-201ENST00000310454 SYNE2Q8WXH0 6885 aaKnown RBP4.24□□□□□ -1.73
GPD2-201ENST00000310454 FSIP2Q5CZC0 6907 aa4.23□□□□□ -1.73
GPD2-201ENST00000310454 ABCA13Q86UQ4 5058 aa4.23□□□□□ -1.73
GPD2-201ENST00000310454 KRTAP2-2Q9BYT5 123 aa4.22□□□□□ -1.73
GPD2-201ENST00000310454 UBR4Q5T4S7 5183 aa4.19□□□□□ -1.74
GPD2-201ENST00000310454 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.17□□□□□ -1.74
GPD2-201ENST00000310454 RNF213Q63HN8 5207 aa4.1□□□□□ -1.75
GPD2-201ENST00000310454 HMCN2Q8NDA2 5059 aa4.09□□□□□ -1.75
GPD2-201ENST00000310454 FAT4Q6V0I7 4981 aa4.05□□□□□ -1.76
GPD2-201ENST00000310454 MUC2Q02817 5179 aa4.03□□□□□ -1.76
GPD2-201ENST00000310454 OBSCNQ5VST9 7968 aa3.98□□□□□ -1.77
GPD2-201ENST00000310454 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
GPD2-201ENST00000310454 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
GPD2-201ENST00000310454 FCGBPQ9Y6R7 5405 aaPredicted RBP3.75□□□□□ -1.81
GPD2-201ENST00000310454 KRTAP20-2Q3LI61 65 aa3.72□□□□□ -1.81
GPD2-201ENST00000310454 USH2AO75445 5202 aa3.64□□□□□ -1.83
GPD2-201ENST00000310454 DSTQ03001 7570 aaKnown RBP3.59□□□□□ -1.83
GPD2-201ENST00000310454 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
GPD2-201ENST00000310454 KMT2DO14686 5537 aa3.55□□□□□ -1.84
GPD2-201ENST00000310454 KRTAP4-6Q9BYQ5 205 aa3.49□□□□□ -1.85
GPD2-201ENST00000310454 NEBP20929 6669 aa3.48□□□□□ -1.85
GPD2-201ENST00000310454 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
GPD2-201ENST00000310454 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
GPD2-201ENST00000310454 KRTAP5-9P26371 169 aa3.43□□□□□ -1.86
GPD2-201ENST00000310454 MACF1Q9UPN3 7388 aaKnown RBP3.41□□□□□ -1.86
GPD2-201ENST00000310454 SSPOA2VEC9 5147 aa3.28□□□□□ -1.88
GPD2-201ENST00000310454 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
GPD2-201ENST00000310454 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
GPD2-201ENST00000310454 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
GPD2-201ENST00000310454 MUC12Q9UKN1 5478 aa3.19□□□□□ -1.9
GPD2-201ENST00000310454 KRTAP5-4Q6L8H1 288 aa3.18□□□□□ -1.9
GPD2-201ENST00000310454 MDN1Q9NU22 5596 aa3.03□□□□□ -1.92
GPD2-201ENST00000310454 KRTAP5-3Q6L8H2 238 aa2.78□□□□□ -1.96
GPD2-201ENST00000310454 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
GPD2-201ENST00000310454 PHGR1C9JFL3 82 aa2.58□□□□□ -2
GPD2-201ENST00000310454 AHNAK2Q8IVF2 5795 aa2.57□□□□□ -2
GPD2-201ENST00000310454 KRTAP5-8O75690 187 aa2.55□□□□□ -2
GPD2-201ENST00000310454 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
GPD2-201ENST00000310454 HMCN1Q96RW7 5635 aa2.49□□□□□ -2.01
GPD2-201ENST00000310454 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
GPD2-201ENST00000310454 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
GPD2-201ENST00000310454 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
GPD2-201ENST00000310454 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
GPD2-201ENST00000310454 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
GPD2-201ENST00000310454 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
GPD2-201ENST00000310454 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
GPD2-201ENST00000310454 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
GPD2-201ENST00000310454 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.14
GPD2-201ENST00000310454 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 101.9 ms