RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
RETREG3-201ENST00000309428 LOC100996750A0A140TA64 210 aa4.38□□□□□ -1.71
RETREG3-201ENST00000309428 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
RETREG3-201ENST00000309428 MACF1Q9UPN3 7388 aaKnown RBP4.35□□□□□ -1.71
RETREG3-201ENST00000309428 MT1GP13640 62 aa4.34□□□□□ -1.72
RETREG3-201ENST00000309428 SPRR2FQ96RM1 72 aa4.32□□□□□ -1.72
RETREG3-201ENST00000309428 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
RETREG3-201ENST00000309428 MT1LQ93083 61 aa4.27□□□□□ -1.73
RETREG3-201ENST00000309428 MT1EP04732 61 aa4.26□□□□□ -1.73
RETREG3-201ENST00000309428 LCE3BQ5TA77 95 aa4.19□□□□□ -1.74
RETREG3-201ENST00000309428 MDN1Q9NU22 5596 aa4.18□□□□□ -1.74
RETREG3-201ENST00000309428 KRTAP19-6Q3LI70 58 aa4.07□□□□□ -1.76
RETREG3-201ENST00000309428 KRTAP4-9Q9BYQ8 210 aa4.05□□□□□ -1.76
RETREG3-201ENST00000309428 KRTAP2-3P0C7H8 128 aa4.03□□□□□ -1.76
RETREG3-201ENST00000309428 KRTAP19-3Q7Z4W3 81 aa4.03□□□□□ -1.76
RETREG3-201ENST00000309428 MT1MQ8N339 61 aa4.03□□□□□ -1.76
RETREG3-201ENST00000309428 KRTAP2-4Q9BYR9 128 aa4.03□□□□□ -1.76
RETREG3-201ENST00000309428 KRTAP2-1Q9BYU5 128 aa4.03□□□□□ -1.76
RETREG3-201ENST00000309428 KRTAP9-2Q9BYQ4 174 aa3.91□□□□□ -1.78
RETREG3-201ENST00000309428 SPRR2EP22531 72 aa3.88□□□□□ -1.79
RETREG3-201ENST00000309428 SPRR2BP35325 72 aa3.88□□□□□ -1.79
RETREG3-201ENST00000309428 SPRR2AP35326 72 aa3.88□□□□□ -1.79
RETREG3-201ENST00000309428 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
RETREG3-201ENST00000309428 KRTAP19-4Q3LI73 84 aa3.8□□□□□ -1.8
RETREG3-201ENST00000309428 PRM1P04553 51 aa3.8□□□□□ -1.8
RETREG3-201ENST00000309428 LCE3EQ5T5B0 92 aa3.77□□□□□ -1.81
RETREG3-201ENST00000309428 LCE5AQ5TCM9 118 aa3.76□□□□□ -1.81
RETREG3-201ENST00000309428 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
RETREG3-201ENST00000309428 KRTAP9-6A0A140TA67 174 aa3.71□□□□□ -1.82
RETREG3-201ENST00000309428 KRTAP9-7A8MTY7 169 aa3.68□□□□□ -1.82
RETREG3-201ENST00000309428 SPRR2DP22532 72 aa3.68□□□□□ -1.82
RETREG3-201ENST00000309428 LCE1AQ5T7P2 110 aa3.66□□□□□ -1.82
RETREG3-201ENST00000309428 MT4P47944 62 aa3.51□□□□□ -1.85
RETREG3-201ENST00000309428 MT1AP04731 61 aa3.5□□□□□ -1.85
RETREG3-201ENST00000309428 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.47□□□□□ -1.85
RETREG3-201ENST00000309428 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
RETREG3-201ENST00000309428 MUC19Q7Z5P9 8384 aa3.36□□□□□ -1.87
RETREG3-201ENST00000309428 KRTAP6-3Q3LI67 103 aa3.34□□□□□ -1.87
RETREG3-201ENST00000309428 KRTAP5-9P26371 169 aa3.34□□□□□ -1.88
RETREG3-201ENST00000309428 NEBP20929 6669 aa3.32□□□□□ -1.88
RETREG3-201ENST00000309428 MT3P25713 68 aa3.31□□□□□ -1.88
RETREG3-201ENST00000309428 KRTAP9-4Q9BYQ2 154 aa3.3□□□□□ -1.88
RETREG3-201ENST00000309428 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
RETREG3-201ENST00000309428 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
RETREG3-201ENST00000309428 LCE1DQ5T752 114 aa3.19□□□□□ -1.9
RETREG3-201ENST00000309428 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
RETREG3-201ENST00000309428 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.91
RETREG3-201ENST00000309428 LCE4AQ5TA78 99 aa3.14□□□□□ -1.91
RETREG3-201ENST00000309428 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
RETREG3-201ENST00000309428 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
RETREG3-201ENST00000309428 MUC5ACP98088 5654 aa3.05□□□□□ -1.92
RETREG3-201ENST00000309428 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
RETREG3-201ENST00000309428 KRTAP20-2Q3LI61 65 aa2.94□□□□□ -1.94
RETREG3-201ENST00000309428 KRTAP4-11Q9BYQ6 195 aa2.93□□□□□ -1.94
RETREG3-201ENST00000309428 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
RETREG3-201ENST00000309428 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
RETREG3-201ENST00000309428 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.96
RETREG3-201ENST00000309428 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.98
RETREG3-201ENST00000309428 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
RETREG3-201ENST00000309428 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
RETREG3-201ENST00000309428 KRTAP5-3Q6L8H2 238 aa2.57□□□□□ -2
RETREG3-201ENST00000309428 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
RETREG3-201ENST00000309428 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
RETREG3-201ENST00000309428 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
RETREG3-201ENST00000309428 GPR98Q8WXG9 6306 aa2.49□□□□□ -2.01
RETREG3-201ENST00000309428 KRTAP5-10Q6L8G5 202 aa2.42□□□□□ -2.02
RETREG3-201ENST00000309428 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
RETREG3-201ENST00000309428 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
RETREG3-201ENST00000309428 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
RETREG3-201ENST00000309428 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
RETREG3-201ENST00000309428 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
RETREG3-201ENST00000309428 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
RETREG3-201ENST00000309428 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
RETREG3-201ENST00000309428 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
RETREG3-201ENST00000309428 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
RETREG3-201ENST00000309428 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
RETREG3-201ENST00000309428 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 239.5 ms