RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 MACF1Q9UPN3 7388 aaKnown RBP8.18□□□□□ -1.1
RFWD2-201ENST00000308769 CRCT1Q9UGL9 99 aa8.17□□□□□ -1.1
RFWD2-201ENST00000308769 KRTAP19-3Q7Z4W3 81 aa8.14□□□□□ -1.11
RFWD2-201ENST00000308769 SPRR2FQ96RM1 72 aa8.11□□□□□ -1.11
RFWD2-201ENST00000308769 KRTAP4-3Q9BYR4 195 aa8.07□□□□□ -1.12
RFWD2-201ENST00000308769 MT1GP13640 62 aa8.06□□□□□ -1.12
RFWD2-201ENST00000308769 MT1MQ8N339 61 aa8.05□□□□□ -1.12
RFWD2-201ENST00000308769 LCE5AQ5TCM9 118 aa7.94□□□□□ -1.14
RFWD2-201ENST00000308769 SYNE2Q8WXH0 6885 aaKnown RBP7.9□□□□□ -1.14
RFWD2-201ENST00000308769 LOC100996750A0A140TA64 210 aa7.9□□□□□ -1.14
RFWD2-201ENST00000308769 KRTAP2-3P0C7H8 128 aa7.79□□□□□ -1.16
RFWD2-201ENST00000308769 KRTAP2-4Q9BYR9 128 aa7.79□□□□□ -1.16
RFWD2-201ENST00000308769 KRTAP2-1Q9BYU5 128 aa7.79□□□□□ -1.16
RFWD2-201ENST00000308769 KRTAP5-9P26371 169 aa7.77□□□□□ -1.17
RFWD2-201ENST00000308769 KRTAP9-6A0A140TA67 174 aa7.75□□□□□ -1.17
RFWD2-201ENST00000308769 DSTQ03001 7570 aaKnown RBP7.74□□□□□ -1.17
RFWD2-201ENST00000308769 MDN1Q9NU22 5596 aa7.69□□□□□ -1.18
RFWD2-201ENST00000308769 LCE1AQ5T7P2 110 aa7.66□□□□□ -1.18
RFWD2-201ENST00000308769 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.56□□□□□ -1.2
RFWD2-201ENST00000308769 SPRR2EP22531 72 aa7.54□□□□□ -1.2
RFWD2-201ENST00000308769 SPRR2BP35325 72 aa7.54□□□□□ -1.2
RFWD2-201ENST00000308769 SPRR2AP35326 72 aa7.54□□□□□ -1.2
RFWD2-201ENST00000308769 INE1O15225 51 aa7.53□□□□□ -1.2
RFWD2-201ENST00000308769 KRTAP6-3Q3LI67 103 aa7.36□□□□□ -1.23
RFWD2-201ENST00000308769 SPRR2DP22532 72 aa7.24□□□□□ -1.25
RFWD2-201ENST00000308769 KRTAP6-1Q3LI64 71 aa7.2□□□□□ -1.26
RFWD2-201ENST00000308769 KRTAP5-5Q701N2 237 aaPredicted RBP7.19□□□□□ -1.26
RFWD2-201ENST00000308769 MT1AP04731 61 aa7.15□□□□□ -1.26
RFWD2-201ENST00000308769 LCE3BQ5TA77 95 aa7.15□□□□□ -1.27
RFWD2-201ENST00000308769 KRTAP9-7A8MTY7 169 aa7.12□□□□□ -1.27
RFWD2-201ENST00000308769 SYNE1Q8NF91 8797 aaKnown RBP6.95□□□□□ -1.3
RFWD2-201ENST00000308769 KRTAP4-9Q9BYQ8 210 aa6.89□□□□□ -1.31
RFWD2-201ENST00000308769 NEBP20929 6669 aa6.89□□□□□ -1.31
RFWD2-201ENST00000308769 KRTAP9-4Q9BYQ2 154 aa6.77□□□□□ -1.33
RFWD2-201ENST00000308769 KRTAP12-4P60329 112 aa6.75□□□□□ -1.33
RFWD2-201ENST00000308769 KRTAP5-4Q6L8H1 288 aa6.59□□□□□ -1.35
RFWD2-201ENST00000308769 LCE3DQ9BYE3 92 aa6.57□□□□□ -1.36
RFWD2-201ENST00000308769 KRTAP6-2Q3LI66 62 aa6.54□□□□□ -1.36
RFWD2-201ENST00000308769 MT3P25713 68 aa6.44□□□□□ -1.38
RFWD2-201ENST00000308769 LCE3EQ5T5B0 92 aa6.43□□□□□ -1.38
RFWD2-201ENST00000308769 KRTAP4-6Q9BYQ5 205 aa6.36□□□□□ -1.39
RFWD2-201ENST00000308769 MT4P47944 62 aa6.35□□□□□ -1.39
RFWD2-201ENST00000308769 LCE4AQ5TA78 99 aa6.31□□□□□ -1.4
RFWD2-201ENST00000308769 KRTAP2-2Q9BYT5 123 aa6.31□□□□□ -1.4
RFWD2-201ENST00000308769 KRTAP20-1Q3LI63 56 aa6.29□□□□□ -1.4
RFWD2-201ENST00000308769 OBSCNQ5VST9 7968 aa6.22□□□□□ -1.41
RFWD2-201ENST00000308769 KRTAP20-2Q3LI61 65 aa6.2□□□□□ -1.42
RFWD2-201ENST00000308769 LCE1DQ5T752 114 aa6.11□□□□□ -1.43
RFWD2-201ENST00000308769 HMCN1Q96RW7 5635 aa6.09□□□□□ -1.43
RFWD2-201ENST00000308769 KRTAP5-2Q701N4 177 aa6.07□□□□□ -1.44
RFWD2-201ENST00000308769 KRTAP5-3Q6L8H2 238 aa5.93□□□□□ -1.46
RFWD2-201ENST00000308769 PRM1P04553 51 aa5.91□□□□□ -1.46
RFWD2-201ENST00000308769 LCE1EQ5T753 118 aa5.42□□□□□ -1.54
RFWD2-201ENST00000308769 MUC5ACP98088 5654 aa5.33□□□□□ -1.56
RFWD2-201ENST00000308769 LCE1BQ5T7P3 118 aa5.27□□□□□ -1.57
RFWD2-201ENST00000308769 KRTAP4-11Q9BYQ6 195 aa5.25□□□□□ -1.57
RFWD2-201ENST00000308769 KRTAP5-1Q6L8H4 278 aa5.23□□□□□ -1.57
RFWD2-201ENST00000308769 KRTAP5-10Q6L8G5 202 aa5.17□□□□□ -1.58
RFWD2-201ENST00000308769 KRTAP4-2Q9BYR5 136 aa5.15□□□□□ -1.59
RFWD2-201ENST00000308769 AHNAK2Q8IVF2 5795 aa5.11□□□□□ -1.59
RFWD2-201ENST00000308769 LCE1CQ5T751 118 aa5.11□□□□□ -1.59
RFWD2-201ENST00000308769 KRTAP5-8O75690 187 aa5.05□□□□□ -1.6
RFWD2-201ENST00000308769 KRTAP5-7Q6L8G8 165 aa4.9□□□□□ -1.63
RFWD2-201ENST00000308769 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.79□□□□□ -1.64
RFWD2-201ENST00000308769 KRTAP21-2Q3LI59 83 aa4.67□□□□□ -1.66
RFWD2-201ENST00000308769 GPR98Q8WXG9 6306 aa4.59□□□□□ -1.67
RFWD2-201ENST00000308769 KRTAP5-11Q6L8G4 156 aa4.45□□□□□ -1.7
RFWD2-201ENST00000308769 MUC5BQ9HC84 5762 aaPredicted RBP4.41□□□□□ -1.7
RFWD2-201ENST00000308769 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.71
RFWD2-201ENST00000308769 KRTAP4-12Q9BQ66 201 aa4.25□□□□□ -1.73
RFWD2-201ENST00000308769 KRTAP4-4Q9BYR3 166 aa4.25□□□□□ -1.73
RFWD2-201ENST00000308769 PHGR1C9JFL3 82 aa3.84□□□□□ -1.79
RFWD2-201ENST00000308769 LCE1FQ5T754 118 aa3.8□□□□□ -1.8
RFWD2-201ENST00000308769 AHNAKQ09666 5890 aaKnown RBP3.77□□□□□ -1.81
RFWD2-201ENST00000308769 MUC19Q7Z5P9 8384 aa3.73□□□□□ -1.81
RFWD2-201ENST00000308769 KRTAP21-1Q3LI58 79 aa3.64□□□□□ -1.83
RFWD2-201ENST00000308769 MUC16Q8WXI7 14507 aa2.49□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 46.2 ms