RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 INE1O15225 51 aa6.93□□□□□ -1.3
SSH3-202ENST00000308298 KRTAP19-3Q7Z4W3 81 aa6.79□□□□□ -1.32
SSH3-202ENST00000308298 MT1GP13640 62 aa6.75□□□□□ -1.33
SSH3-202ENST00000308298 MUC12Q9UKN1 5478 aa6.75□□□□□ -1.33
SSH3-202ENST00000308298 MACF1Q9UPN3 7388 aaKnown RBP6.73□□□□□ -1.33
SSH3-202ENST00000308298 MT1MQ8N339 61 aa6.72□□□□□ -1.33
SSH3-202ENST00000308298 SPRR2FQ96RM1 72 aa6.72□□□□□ -1.33
SSH3-202ENST00000308298 KRTAP4-3Q9BYR4 195 aa6.67□□□□□ -1.34
SSH3-202ENST00000308298 LCE5AQ5TCM9 118 aa6.62□□□□□ -1.35
SSH3-202ENST00000308298 KRTAP5-9P26371 169 aa6.58□□□□□ -1.36
SSH3-202ENST00000308298 KRTAP2-3P0C7H8 128 aa6.57□□□□□ -1.36
SSH3-202ENST00000308298 KRTAP2-4Q9BYR9 128 aa6.57□□□□□ -1.36
SSH3-202ENST00000308298 KRTAP2-1Q9BYU5 128 aa6.57□□□□□ -1.36
SSH3-202ENST00000308298 LOC100996750A0A140TA64 210 aa6.54□□□□□ -1.36
SSH3-202ENST00000308298 KRTAP9-6A0A140TA67 174 aa6.54□□□□□ -1.36
SSH3-202ENST00000308298 SYNE2Q8WXH0 6885 aaKnown RBP6.52□□□□□ -1.37
SSH3-202ENST00000308298 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.43□□□□□ -1.38
SSH3-202ENST00000308298 KRTAP6-3Q3LI67 103 aa6.38□□□□□ -1.39
SSH3-202ENST00000308298 LCE1AQ5T7P2 110 aa6.37□□□□□ -1.39
SSH3-202ENST00000308298 MDN1Q9NU22 5596 aa6.31□□□□□ -1.4
SSH3-202ENST00000308298 SPRR2EP22531 72 aa6.27□□□□□ -1.41
SSH3-202ENST00000308298 SPRR2BP35325 72 aa6.27□□□□□ -1.41
SSH3-202ENST00000308298 SPRR2AP35326 72 aa6.27□□□□□ -1.41
SSH3-202ENST00000308298 DSTQ03001 7570 aaKnown RBP6.27□□□□□ -1.41
SSH3-202ENST00000308298 SPRR2DP22532 72 aa6.04□□□□□ -1.44
SSH3-202ENST00000308298 KRTAP9-7A8MTY7 169 aa6.01□□□□□ -1.45
SSH3-202ENST00000308298 MT1AP04731 61 aa6.01□□□□□ -1.45
SSH3-202ENST00000308298 KRTAP5-5Q701N2 237 aaPredicted RBP6□□□□□ -1.45
SSH3-202ENST00000308298 KRTAP6-1Q3LI64 71 aa5.99□□□□□ -1.45
SSH3-202ENST00000308298 LCE3BQ5TA77 95 aa5.94□□□□□ -1.46
SSH3-202ENST00000308298 NEBP20929 6669 aa5.88□□□□□ -1.47
SSH3-202ENST00000308298 KRTAP12-4P60329 112 aa5.71□□□□□ -1.5
SSH3-202ENST00000308298 KRTAP4-9Q9BYQ8 210 aa5.71□□□□□ -1.5
SSH3-202ENST00000308298 SYNE1Q8NF91 8797 aaKnown RBP5.68□□□□□ -1.5
SSH3-202ENST00000308298 KRTAP9-4Q9BYQ2 154 aa5.67□□□□□ -1.5
SSH3-202ENST00000308298 KRTAP5-4Q6L8H1 288 aa5.54□□□□□ -1.52
SSH3-202ENST00000308298 LCE3DQ9BYE3 92 aa5.53□□□□□ -1.52
SSH3-202ENST00000308298 KRTAP6-2Q3LI66 62 aa5.44□□□□□ -1.54
SSH3-202ENST00000308298 KRTAP2-2Q9BYT5 123 aa5.43□□□□□ -1.54
SSH3-202ENST00000308298 LCE3EQ5T5B0 92 aa5.43□□□□□ -1.54
SSH3-202ENST00000308298 MT3P25713 68 aa5.41□□□□□ -1.54
SSH3-202ENST00000308298 LCE4AQ5TA78 99 aa5.4□□□□□ -1.55
SSH3-202ENST00000308298 KRTAP20-1Q3LI63 56 aa5.35□□□□□ -1.55
SSH3-202ENST00000308298 KRTAP4-6Q9BYQ5 205 aa5.24□□□□□ -1.57
SSH3-202ENST00000308298 MT4P47944 62 aa5.23□□□□□ -1.57
SSH3-202ENST00000308298 KRTAP20-2Q3LI61 65 aa5.16□□□□□ -1.58
SSH3-202ENST00000308298 LCE1DQ5T752 114 aa5.13□□□□□ -1.59
SSH3-202ENST00000308298 KRTAP5-2Q701N4 177 aa5.07□□□□□ -1.6
SSH3-202ENST00000308298 HMCN1Q96RW7 5635 aa5.03□□□□□ -1.6
SSH3-202ENST00000308298 PRM1P04553 51 aa5.02□□□□□ -1.61
SSH3-202ENST00000308298 OBSCNQ5VST9 7968 aa4.99□□□□□ -1.61
SSH3-202ENST00000308298 KRTAP5-3Q6L8H2 238 aa4.97□□□□□ -1.61
SSH3-202ENST00000308298 LCE1EQ5T753 118 aa4.56□□□□□ -1.68
SSH3-202ENST00000308298 MUC5ACP98088 5654 aa4.45□□□□□ -1.7
SSH3-202ENST00000308298 KRTAP4-11Q9BYQ6 195 aa4.43□□□□□ -1.7
SSH3-202ENST00000308298 LCE1BQ5T7P3 118 aa4.36□□□□□ -1.71
SSH3-202ENST00000308298 AHNAK2Q8IVF2 5795 aa4.36□□□□□ -1.71
SSH3-202ENST00000308298 KRTAP5-1Q6L8H4 278 aa4.34□□□□□ -1.71
SSH3-202ENST00000308298 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
SSH3-202ENST00000308298 KRTAP4-2Q9BYR5 136 aa4.28□□□□□ -1.72
SSH3-202ENST00000308298 LCE1CQ5T751 118 aa4.28□□□□□ -1.73
SSH3-202ENST00000308298 KRTAP5-8O75690 187 aa4.26□□□□□ -1.73
SSH3-202ENST00000308298 KRTAP5-7Q6L8G8 165 aa4.19□□□□□ -1.74
SSH3-202ENST00000308298 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
SSH3-202ENST00000308298 KRTAP21-2Q3LI59 83 aa3.9□□□□□ -1.79
SSH3-202ENST00000308298 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
SSH3-202ENST00000308298 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
SSH3-202ENST00000308298 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
SSH3-202ENST00000308298 MUC5BQ9HC84 5762 aaPredicted RBP3.58□□□□□ -1.84
SSH3-202ENST00000308298 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
SSH3-202ENST00000308298 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
SSH3-202ENST00000308298 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
SSH3-202ENST00000308298 AHNAKQ09666 5890 aaKnown RBP3.24□□□□□ -1.89
SSH3-202ENST00000308298 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
SSH3-202ENST00000308298 KRTAP21-1Q3LI58 79 aa3.19□□□□□ -1.9
SSH3-202ENST00000308298 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
SSH3-202ENST00000308298 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 10.4 ms