RNA–Protein interactions for RNA: ENST00000308159.9

NUP93-201, Transcript of nucleoporin 93, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP93, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-201ENST00000308159 FCGBPQ9Y6R7 5405 aaPredicted RBP5.12□□□□□ -1.59
NUP93-201ENST00000308159 LCE2DQ5TA82 110 aaPredicted RBP5.07□□□□□ -1.6
NUP93-201ENST00000308159 MUC12Q9UKN1 5478 aa5.07□□□□□ -1.6
NUP93-201ENST00000308159 KRTAP4-3Q9BYR4 195 aa5.05□□□□□ -1.6
NUP93-201ENST00000308159 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
NUP93-201ENST00000308159 KRTAP19-3Q7Z4W3 81 aa4.98□□□□□ -1.61
NUP93-201ENST00000308159 MT1MQ8N339 61 aa4.97□□□□□ -1.61
NUP93-201ENST00000308159 MT1GP13640 62 aa4.96□□□□□ -1.62
NUP93-201ENST00000308159 KRTAP9-2Q9BYQ4 174 aa4.9□□□□□ -1.62
NUP93-201ENST00000308159 SPRR2FQ96RM1 72 aa4.84□□□□□ -1.63
NUP93-201ENST00000308159 CRCT1Q9UGL9 99 aa4.84□□□□□ -1.63
NUP93-201ENST00000308159 MACF1Q9UPN3 7388 aaKnown RBP4.83□□□□□ -1.64
NUP93-201ENST00000308159 DSTQ03001 7570 aaKnown RBP4.83□□□□□ -1.64
NUP93-201ENST00000308159 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
NUP93-201ENST00000308159 SYNE2Q8WXH0 6885 aaKnown RBP4.67□□□□□ -1.66
NUP93-201ENST00000308159 KRTAP9-6A0A140TA67 174 aa4.62□□□□□ -1.67
NUP93-201ENST00000308159 MDN1Q9NU22 5596 aa4.61□□□□□ -1.67
NUP93-201ENST00000308159 LCE3BQ5TA77 95 aa4.57□□□□□ -1.68
NUP93-201ENST00000308159 KRTAP12-4P60329 112 aa4.53□□□□□ -1.68
NUP93-201ENST00000308159 LCE1AQ5T7P2 110 aa4.53□□□□□ -1.68
NUP93-201ENST00000308159 KRTAP5-9P26371 169 aa4.51□□□□□ -1.69
NUP93-201ENST00000308159 KRTAP6-1Q3LI64 71 aa4.51□□□□□ -1.69
NUP93-201ENST00000308159 KRTAP4-9Q9BYQ8 210 aa4.47□□□□□ -1.69
NUP93-201ENST00000308159 MT1AP04731 61 aa4.44□□□□□ -1.7
NUP93-201ENST00000308159 SYNE1Q8NF91 8797 aaKnown RBP4.44□□□□□ -1.7
NUP93-201ENST00000308159 SPRR2EP22531 72 aa4.41□□□□□ -1.7
NUP93-201ENST00000308159 SPRR2BP35325 72 aa4.41□□□□□ -1.7
NUP93-201ENST00000308159 SPRR2AP35326 72 aa4.41□□□□□ -1.7
NUP93-201ENST00000308159 KRTAP5-5Q701N2 237 aaPredicted RBP4.41□□□□□ -1.7
NUP93-201ENST00000308159 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.31□□□□□ -1.72
NUP93-201ENST00000308159 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
NUP93-201ENST00000308159 SPRR2DP22532 72 aa4.22□□□□□ -1.73
NUP93-201ENST00000308159 KRTAP9-7A8MTY7 169 aa4.2□□□□□ -1.74
NUP93-201ENST00000308159 LCE3EQ5T5B0 92 aa4.2□□□□□ -1.74
NUP93-201ENST00000308159 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
NUP93-201ENST00000308159 KRTAP6-3Q3LI67 103 aa4.13□□□□□ -1.75
NUP93-201ENST00000308159 KRTAP6-2Q3LI66 62 aa4.06□□□□□ -1.76
NUP93-201ENST00000308159 PRM1P04553 51 aa4.01□□□□□ -1.77
NUP93-201ENST00000308159 MT3P25713 68 aa3.99□□□□□ -1.77
NUP93-201ENST00000308159 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
NUP93-201ENST00000308159 NEBP20929 6669 aa3.91□□□□□ -1.78
NUP93-201ENST00000308159 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.79
NUP93-201ENST00000308159 KRTAP4-6Q9BYQ5 205 aa3.78□□□□□ -1.8
NUP93-201ENST00000308159 MT4P47944 62 aa3.73□□□□□ -1.81
NUP93-201ENST00000308159 KRTAP20-2Q3LI61 65 aa3.67□□□□□ -1.82
NUP93-201ENST00000308159 KRTAP20-1Q3LI63 56 aa3.66□□□□□ -1.82
NUP93-201ENST00000308159 LCE4AQ5TA78 99 aa3.64□□□□□ -1.83
NUP93-201ENST00000308159 KRTAP5-2Q701N4 177 aa3.64□□□□□ -1.83
NUP93-201ENST00000308159 HMCN1Q96RW7 5635 aa3.61□□□□□ -1.83
NUP93-201ENST00000308159 LCE1DQ5T752 114 aa3.52□□□□□ -1.85
NUP93-201ENST00000308159 KRTAP5-3Q6L8H2 238 aa3.5□□□□□ -1.85
NUP93-201ENST00000308159 KRTAP2-2Q9BYT5 123 aa3.5□□□□□ -1.85
NUP93-201ENST00000308159 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
NUP93-201ENST00000308159 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
NUP93-201ENST00000308159 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
NUP93-201ENST00000308159 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
NUP93-201ENST00000308159 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
NUP93-201ENST00000308159 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
NUP93-201ENST00000308159 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
NUP93-201ENST00000308159 KRTAP4-11Q9BYQ6 195 aa3.04□□□□□ -1.92
NUP93-201ENST00000308159 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
NUP93-201ENST00000308159 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
NUP93-201ENST00000308159 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
NUP93-201ENST00000308159 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
NUP93-201ENST00000308159 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
NUP93-201ENST00000308159 KRTAP5-7Q6L8G8 165 aa2.85□□□□□ -1.95
NUP93-201ENST00000308159 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
NUP93-201ENST00000308159 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
NUP93-201ENST00000308159 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
NUP93-201ENST00000308159 LCE1FQ5T754 118 aa2.56□□□□□ -2
NUP93-201ENST00000308159 KRTAP4-12Q9BQ66 201 aa2.55□□□□□ -2
NUP93-201ENST00000308159 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
NUP93-201ENST00000308159 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
NUP93-201ENST00000308159 KRTAP9-9Q9BYP9 154 aa2.45□□□□□ -2.02
NUP93-201ENST00000308159 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
NUP93-201ENST00000308159 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
NUP93-201ENST00000308159 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 71.5 ms