RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 MT1EP04732 61 aa3.72□□□□□ -1.81
PCDHGC4-201ENST00000306593 MT1LQ93083 61 aa3.72□□□□□ -1.81
PCDHGC4-201ENST00000306593 LCE3BQ5TA77 95 aa3.7□□□□□ -1.82
PCDHGC4-201ENST00000306593 SPRR2DP22532 72 aa3.69□□□□□ -1.82
PCDHGC4-201ENST00000306593 KRTAP9-6A0A140TA67 174 aa3.68□□□□□ -1.82
PCDHGC4-201ENST00000306593 KMT2DO14686 5537 aa3.66□□□□□ -1.82
PCDHGC4-201ENST00000306593 KRTAP12-4P60329 112 aa3.66□□□□□ -1.82
PCDHGC4-201ENST00000306593 KRTAP19-7Q3SYF9 63 aa3.64□□□□□ -1.83
PCDHGC4-201ENST00000306593 KRTAP19-3Q7Z4W3 81 aa3.63□□□□□ -1.83
PCDHGC4-201ENST00000306593 KRTAP4-7Q9BYR0 210 aa3.58□□□□□ -1.84
PCDHGC4-201ENST00000306593 MACF1Q9UPN3 7388 aaKnown RBP3.55□□□□□ -1.84
PCDHGC4-201ENST00000306593 MT1MQ8N339 61 aa3.53□□□□□ -1.84
PCDHGC4-201ENST00000306593 DSTQ03001 7570 aaKnown RBP3.49□□□□□ -1.85
PCDHGC4-201ENST00000306593 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
PCDHGC4-201ENST00000306593 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
PCDHGC4-201ENST00000306593 KRTAP2-1Q9BYU5 128 aa3.46□□□□□ -1.86
PCDHGC4-201ENST00000306593 SYNE2Q8WXH0 6885 aaKnown RBP3.44□□□□□ -1.86
PCDHGC4-201ENST00000306593 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
PCDHGC4-201ENST00000306593 SSPOA2VEC9 5147 aa3.43□□□□□ -1.86
PCDHGC4-201ENST00000306593 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
PCDHGC4-201ENST00000306593 KRTAP9-7A8MTY7 169 aa3.4□□□□□ -1.87
PCDHGC4-201ENST00000306593 MT4P47944 62 aa3.37□□□□□ -1.87
PCDHGC4-201ENST00000306593 KRTAP4-3Q9BYR4 195 aa3.37□□□□□ -1.87
PCDHGC4-201ENST00000306593 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
PCDHGC4-201ENST00000306593 LOC100996750A0A140TA64 210 aa3.36□□□□□ -1.87
PCDHGC4-201ENST00000306593 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
PCDHGC4-201ENST00000306593 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.35□□□□□ -1.87
PCDHGC4-201ENST00000306593 LCE5AQ5TCM9 118 aa3.29□□□□□ -1.88
PCDHGC4-201ENST00000306593 MUC12Q9UKN1 5478 aa3.28□□□□□ -1.88
PCDHGC4-201ENST00000306593 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
PCDHGC4-201ENST00000306593 FCGBPQ9Y6R7 5405 aaPredicted RBP3.27□□□□□ -1.89
PCDHGC4-201ENST00000306593 MT1AP04731 61 aa3.26□□□□□ -1.89
PCDHGC4-201ENST00000306593 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
PCDHGC4-201ENST00000306593 LCE1DQ5T752 114 aa3.23□□□□□ -1.89
PCDHGC4-201ENST00000306593 LCE1AQ5T7P2 110 aa3.22□□□□□ -1.89
PCDHGC4-201ENST00000306593 MT3P25713 68 aa3.22□□□□□ -1.89
PCDHGC4-201ENST00000306593 KRTAP20-1Q3LI63 56 aa3.21□□□□□ -1.9
PCDHGC4-201ENST00000306593 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
PCDHGC4-201ENST00000306593 KRTAP6-1Q3LI64 71 aa3.09□□□□□ -1.91
PCDHGC4-201ENST00000306593 KRTAP2-2Q9BYT5 123 aa3.06□□□□□ -1.92
PCDHGC4-201ENST00000306593 PRM1P04553 51 aa3.04□□□□□ -1.92
PCDHGC4-201ENST00000306593 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
PCDHGC4-201ENST00000306593 KRTAP9-4Q9BYQ2 154 aa3.02□□□□□ -1.93
PCDHGC4-201ENST00000306593 KRTAP4-9Q9BYQ8 210 aa3.01□□□□□ -1.93
PCDHGC4-201ENST00000306593 MDN1Q9NU22 5596 aa2.99□□□□□ -1.93
PCDHGC4-201ENST00000306593 LCE4AQ5TA78 99 aa2.95□□□□□ -1.94
PCDHGC4-201ENST00000306593 KRTAP6-2Q3LI66 62 aa2.9□□□□□ -1.95
PCDHGC4-201ENST00000306593 NEBP20929 6669 aa2.89□□□□□ -1.95
PCDHGC4-201ENST00000306593 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
PCDHGC4-201ENST00000306593 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
PCDHGC4-201ENST00000306593 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
PCDHGC4-201ENST00000306593 KRTAP5-5Q701N2 237 aaPredicted RBP2.76□□□□□ -1.97
PCDHGC4-201ENST00000306593 KRTAP20-2Q3LI61 65 aa2.58□□□□□ -2
PCDHGC4-201ENST00000306593 KRTAP4-6Q9BYQ5 205 aa2.56□□□□□ -2
PCDHGC4-201ENST00000306593 KRTAP9-9Q9BYP9 154 aa2.54□□□□□ -2
PCDHGC4-201ENST00000306593 KRTAP5-4Q6L8H1 288 aa2.53□□□□□ -2
PCDHGC4-201ENST00000306593 HMCN1Q96RW7 5635 aa2.36□□□□□ -2.03
PCDHGC4-201ENST00000306593 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
PCDHGC4-201ENST00000306593 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
PCDHGC4-201ENST00000306593 KRTAP4-11Q9BYQ6 195 aa2.29□□□□□ -2.04
PCDHGC4-201ENST00000306593 KRTAP4-12Q9BQ66 201 aa2.28□□□□□ -2.04
PCDHGC4-201ENST00000306593 KRTAP4-2Q9BYR5 136 aa2.28□□□□□ -2.04
PCDHGC4-201ENST00000306593 KRTAP5-3Q6L8H2 238 aa2.27□□□□□ -2.05
PCDHGC4-201ENST00000306593 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
PCDHGC4-201ENST00000306593 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
PCDHGC4-201ENST00000306593 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
PCDHGC4-201ENST00000306593 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
PCDHGC4-201ENST00000306593 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
PCDHGC4-201ENST00000306593 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
PCDHGC4-201ENST00000306593 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
PCDHGC4-201ENST00000306593 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
PCDHGC4-201ENST00000306593 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
PCDHGC4-201ENST00000306593 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.11
PCDHGC4-201ENST00000306593 MUC5BQ9HC84 5762 aaPredicted RBP1.8□□□□□ -2.12
PCDHGC4-201ENST00000306593 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
PCDHGC4-201ENST00000306593 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
PCDHGC4-201ENST00000306593 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 42.7 ms