RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 MT1MQ8N339 61 aa9.36□□□□□ -0.91
CDKN2A-201ENST00000304494 PCP4P48539 62 aa9.31□□□□□ -0.92
CDKN2A-201ENST00000304494 KRTAP9-9Q9BYP9 154 aa9.3□□□□□ -0.92
CDKN2A-201ENST00000304494 KRTAP9-4Q9BYQ2 154 aa9.3□□□□□ -0.92
CDKN2A-201ENST00000304494 KRTAP4-9Q9BYQ8 210 aa9.25□□□□□ -0.93
CDKN2A-201ENST00000304494 MIR22HGQ0VDD5 57 aa9.24□□□□□ -0.93
CDKN2A-201ENST00000304494 KRTAP12-3P60328 96 aa9.15□□□□□ -0.94
CDKN2A-201ENST00000304494 V9GYY9 64 aa9.14□□□□□ -0.95
CDKN2A-201ENST00000304494 K7ERS5 55 aa9.12□□□□□ -0.95
CDKN2A-201ENST00000304494 KRTAP4-3Q9BYR4 195 aa9.11□□□□□ -0.95
CDKN2A-201ENST00000304494 LCE4AQ5TA78 99 aa9.1□□□□□ -0.95
CDKN2A-201ENST00000304494 GPR98Q8WXG9 6306 aa9.08□□□□□ -0.96
CDKN2A-201ENST00000304494 H3BS24 57 aa9.07□□□□□ -0.96
CDKN2A-201ENST00000304494 KRTAP25-1Q3LHN0 102 aa9.07□□□□□ -0.96
CDKN2A-201ENST00000304494 LCE1DQ5T752 114 aa9.06□□□□□ -0.96
CDKN2A-201ENST00000304494 PSPHP1O15172 72 aa9.05□□□□□ -0.96
CDKN2A-201ENST00000304494 Q1T7F1 81 aa9.04□□□□□ -0.96
CDKN2A-201ENST00000304494 KRTAP19-4Q3LI73 84 aa8.99□□□□□ -0.97
CDKN2A-201ENST00000304494 HMCN1Q96RW7 5635 aa8.97□□□□□ -0.97
CDKN2A-201ENST00000304494 MT4P47944 62 aa8.97□□□□□ -0.97
CDKN2A-201ENST00000304494 KRTAP5-4Q6L8H1 288 aa8.92□□□□□ -0.98
CDKN2A-201ENST00000304494 KRTAP4-7Q9BYR0 210 aa8.91□□□□□ -0.98
CDKN2A-201ENST00000304494 A6NED7 52 aa8.77□□□□□ -1.01
CDKN2A-201ENST00000304494 KRTAP23-1A1A580 65 aa8.75□□□□□ -1.01
CDKN2A-201ENST00000304494 RPS28P62857 69 aaKnown RBP8.66□□□□□ -1.02
CDKN2A-201ENST00000304494 AHNAK2Q8IVF2 5795 aa8.62□□□□□ -1.03
CDKN2A-201ENST00000304494 CDC42SE1Q9NRR8 79 aa8.6□□□□□ -1.03
CDKN2A-201ENST00000304494 KRTAP5-5Q701N2 237 aaPredicted RBP8.58□□□□□ -1.04
CDKN2A-201ENST00000304494 KRTAP15-1Q3LI76 137 aa8.56□□□□□ -1.04
CDKN2A-201ENST00000304494 ROMO1P60602 79 aa8.45□□□□□ -1.06
CDKN2A-201ENST00000304494 LCE3CQ5T5A8 94 aa8.43□□□□□ -1.06
CDKN2A-201ENST00000304494 KRTAP4-2Q9BYR5 136 aa8.42□□□□□ -1.06
CDKN2A-201ENST00000304494 SPRR5A0A1B0GTR4 108 aa8.41□□□□□ -1.06
CDKN2A-201ENST00000304494 KRTAP20-2Q3LI61 65 aa8.41□□□□□ -1.06
CDKN2A-201ENST00000304494 KRTAP12-4P60329 112 aa8.4□□□□□ -1.06
CDKN2A-201ENST00000304494 KRTAP5-10Q6L8G5 202 aa8.39□□□□□ -1.07
CDKN2A-201ENST00000304494 KRTAP4-11Q9BYQ6 195 aa8.38□□□□□ -1.07
CDKN2A-201ENST00000304494 KRTAP5-3Q6L8H2 238 aa8.22□□□□□ -1.09
CDKN2A-201ENST00000304494 SYNE1Q8NF91 8797 aaKnown RBP8.21□□□□□ -1.1
CDKN2A-201ENST00000304494 KRTAP5-7Q6L8G8 165 aa8.08□□□□□ -1.12
CDKN2A-201ENST00000304494 MT1AP04731 61 aa8.02□□□□□ -1.13
CDKN2A-201ENST00000304494 KRTAP6-1Q3LI64 71 aa7.94□□□□□ -1.14
CDKN2A-201ENST00000304494 KRTAP9-6A8MVA2 160 aa7.89□□□□□ -1.15
CDKN2A-201ENST00000304494 KRTAP5-2Q701N4 177 aa7.82□□□□□ -1.16
CDKN2A-201ENST00000304494 BRK1Q8WUW1 75 aa7.76□□□□□ -1.17
CDKN2A-201ENST00000304494 KRTAP6-2Q3LI66 62 aa7.6□□□□□ -1.19
CDKN2A-201ENST00000304494 OBSCNQ5VST9 7968 aa7.42□□□□□ -1.22
CDKN2A-201ENST00000304494 KRTAP5-8O75690 187 aa7.4□□□□□ -1.22
CDKN2A-201ENST00000304494 PRO0628Q9UI54 55 aa7.38□□□□□ -1.23
CDKN2A-201ENST00000304494 MT3P25713 68 aa7.36□□□□□ -1.23
CDKN2A-201ENST00000304494 PMAIP1Q13794 54 aa7.3□□□□□ -1.24
CDKN2A-201ENST00000304494 MUC5BQ9HC84 5762 aaPredicted RBP7.1□□□□□ -1.27
CDKN2A-201ENST00000304494 AHNAKQ09666 5890 aaKnown RBP7.09□□□□□ -1.27
CDKN2A-201ENST00000304494 MUC5ACP98088 5654 aa7.07□□□□□ -1.28
CDKN2A-201ENST00000304494 KRTAP5-1Q6L8H4 278 aa6.99□□□□□ -1.29
CDKN2A-201ENST00000304494 PRAC1Q96KF2 57 aa6.94□□□□□ -1.3
CDKN2A-201ENST00000304494 KTN1-AS1Q86SY8 53 aa6.91□□□□□ -1.3
CDKN2A-201ENST00000304494 LCE1EQ5T753 118 aa6.76□□□□□ -1.33
CDKN2A-201ENST00000304494 SVIPQ8NHG7 77 aa6.53□□□□□ -1.36
CDKN2A-201ENST00000304494 LCE1BQ5T7P3 118 aa6.33□□□□□ -1.4
CDKN2A-201ENST00000304494 LCE1CQ5T751 118 aa6.26□□□□□ -1.41
CDKN2A-201ENST00000304494 LCE3DQ9BYE3 92 aa6.09□□□□□ -1.43
CDKN2A-201ENST00000304494 LUZP6Q538Z0 58 aa5.82□□□□□ -1.48
CDKN2A-201ENST00000304494 LCE3EQ5T5B0 92 aa5.73□□□□□ -1.49
CDKN2A-201ENST00000304494 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.7□□□□□ -1.5
CDKN2A-201ENST00000304494 KRTAP5-11Q6L8G4 156 aa5.66□□□□□ -1.5
CDKN2A-201ENST00000304494 LCE1FQ5T754 118 aa5.52□□□□□ -1.53
CDKN2A-201ENST00000304494 NDUFAF8A1L188 74 aa5.28□□□□□ -1.56
CDKN2A-201ENST00000304494 KRTAP21-2Q3LI59 83 aa5.23□□□□□ -1.57
CDKN2A-201ENST00000304494 A0A0A0MQY5 61 aa5.11□□□□□ -1.59
CDKN2A-201ENST00000304494 PHGR1C9JFL3 82 aa4.9□□□□□ -1.63
CDKN2A-201ENST00000304494 KRTAP4-4Q9BYR3 166 aa4.77□□□□□ -1.65
CDKN2A-201ENST00000304494 MUC19Q7Z5P9 8384 aa4.52□□□□□ -1.69
CDKN2A-201ENST00000304494 INE1O15225 51 aa4.33□□□□□ -1.72
CDKN2A-201ENST00000304494 PRM1P04553 51 aa4.3□□□□□ -1.72
CDKN2A-201ENST00000304494 KRTAP21-1Q3LI58 79 aa3.74□□□□□ -1.81
CDKN2A-201ENST00000304494 MUC16Q8WXI7 14507 aa3.21□□□□□ -1.9
Retrieved 77 of 20,778 RNA–protein pairs in 13.8 ms