RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 C10orf95Q9H7T3 257 aa5.86□□□□□ -1.47
TRAPPC1-201ENST00000303731 ATP5EP56381 51 aaPredicted RBP5.84□□□□□ -1.47
TRAPPC1-201ENST00000303731 HMCN1Q96RW7 5635 aa5.79□□□□□ -1.48
TRAPPC1-201ENST00000303731 MT4P47944 62 aa5.78□□□□□ -1.48
TRAPPC1-201ENST00000303731 KRTAP5-4Q6L8H1 288 aa5.74□□□□□ -1.49
TRAPPC1-201ENST00000303731 LINC01558Q9Y6Z2 57 aa5.74□□□□□ -1.49
TRAPPC1-201ENST00000303731 CCDC179H3BU77 68 aa5.73□□□□□ -1.49
TRAPPC1-201ENST00000303731 KRTAP4-3Q9BYR4 195 aa5.72□□□□□ -1.49
TRAPPC1-201ENST00000303731 KRTAP19-4Q3LI73 84 aa5.7□□□□□ -1.5
TRAPPC1-201ENST00000303731 KRTAP12-3P60328 96 aa5.68□□□□□ -1.5
TRAPPC1-201ENST00000303731 UQCR11O14957 56 aa5.66□□□□□ -1.5
TRAPPC1-201ENST00000303731 KRTAP9-9Q9BYP9 154 aa5.64□□□□□ -1.51
TRAPPC1-201ENST00000303731 KRTAP9-4Q9BYQ2 154 aa5.64□□□□□ -1.51
TRAPPC1-201ENST00000303731 TMEM258P61165 79 aa5.59□□□□□ -1.51
TRAPPC1-201ENST00000303731 AHNAK2Q8IVF2 5795 aa5.57□□□□□ -1.52
TRAPPC1-201ENST00000303731 KRTAP25-1Q3LHN0 102 aa5.55□□□□□ -1.52
TRAPPC1-201ENST00000303731 KRTAP4-7Q9BYR0 210 aa5.55□□□□□ -1.52
TRAPPC1-201ENST00000303731 KRTAP5-10Q6L8G5 202 aa5.53□□□□□ -1.52
TRAPPC1-201ENST00000303731 K7ERS5 55 aa5.49□□□□□ -1.53
TRAPPC1-201ENST00000303731 MIR22HGQ0VDD5 57 aa5.49□□□□□ -1.53
TRAPPC1-201ENST00000303731 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
TRAPPC1-201ENST00000303731 SPRR5A0A1B0GTR4 108 aa5.42□□□□□ -1.54
TRAPPC1-201ENST00000303731 KRTAP20-2Q3LI61 65 aa5.41□□□□□ -1.54
TRAPPC1-201ENST00000303731 KRTAP12-4P60329 112 aa5.39□□□□□ -1.55
TRAPPC1-201ENST00000303731 KRTAP5-3Q6L8H2 238 aa5.37□□□□□ -1.55
TRAPPC1-201ENST00000303731 V9GYY9 64 aa5.37□□□□□ -1.55
TRAPPC1-201ENST00000303731 KRTAP23-1A1A580 65 aa5.36□□□□□ -1.55
TRAPPC1-201ENST00000303731 KRTAP5-7Q6L8G8 165 aa5.35□□□□□ -1.55
TRAPPC1-201ENST00000303731 PSPHP1O15172 72 aa5.27□□□□□ -1.57
TRAPPC1-201ENST00000303731 Q1T7F1 81 aa5.27□□□□□ -1.57
TRAPPC1-201ENST00000303731 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
TRAPPC1-201ENST00000303731 LCE3CQ5T5A8 94 aa5.21□□□□□ -1.58
TRAPPC1-201ENST00000303731 SYNE1Q8NF91 8797 aaKnown RBP5.18□□□□□ -1.58
TRAPPC1-201ENST00000303731 CDC42SE1Q9NRR8 79 aa5.14□□□□□ -1.59
TRAPPC1-201ENST00000303731 A6NED7 52 aa5.13□□□□□ -1.59
TRAPPC1-201ENST00000303731 KRTAP4-11Q9BYQ6 195 aa5.1□□□□□ -1.59
TRAPPC1-201ENST00000303731 KRTAP4-2Q9BYR5 136 aa5.09□□□□□ -1.59
TRAPPC1-201ENST00000303731 MT1AP04731 61 aa5.05□□□□□ -1.6
TRAPPC1-201ENST00000303731 RPS28P62857 69 aaKnown RBP5.04□□□□□ -1.6
TRAPPC1-201ENST00000303731 ROMO1P60602 79 aa5.03□□□□□ -1.6
TRAPPC1-201ENST00000303731 KRTAP5-2Q701N4 177 aa5□□□□□ -1.61
TRAPPC1-201ENST00000303731 KRTAP6-1Q3LI64 71 aa4.99□□□□□ -1.61
TRAPPC1-201ENST00000303731 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
TRAPPC1-201ENST00000303731 KRTAP5-8O75690 187 aa4.8□□□□□ -1.64
TRAPPC1-201ENST00000303731 PCP4P48539 62 aa4.8□□□□□ -1.64
TRAPPC1-201ENST00000303731 KRTAP6-2Q3LI66 62 aa4.8□□□□□ -1.64
TRAPPC1-201ENST00000303731 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
TRAPPC1-201ENST00000303731 MT3P25713 68 aa4.65□□□□□ -1.67
TRAPPC1-201ENST00000303731 SVIPQ8NHG7 77 aa4.65□□□□□ -1.67
TRAPPC1-201ENST00000303731 MUC5BQ9HC84 5762 aaPredicted RBP4.64□□□□□ -1.67
TRAPPC1-201ENST00000303731 MUC5ACP98088 5654 aa4.63□□□□□ -1.67
TRAPPC1-201ENST00000303731 AHNAKQ09666 5890 aaKnown RBP4.59□□□□□ -1.67
TRAPPC1-201ENST00000303731 KRTAP5-1Q6L8H4 278 aa4.49□□□□□ -1.69
TRAPPC1-201ENST00000303731 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
TRAPPC1-201ENST00000303731 BRK1Q8WUW1 75 aa4.24□□□□□ -1.73
TRAPPC1-201ENST00000303731 LCE1BQ5T7P3 118 aa4.01□□□□□ -1.77
TRAPPC1-201ENST00000303731 PMAIP1Q13794 54 aa4□□□□□ -1.77
TRAPPC1-201ENST00000303731 LCE1CQ5T751 118 aa4□□□□□ -1.77
TRAPPC1-201ENST00000303731 PRAC1Q96KF2 57 aa3.82□□□□□ -1.8
TRAPPC1-201ENST00000303731 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
TRAPPC1-201ENST00000303731 PRO0628Q9UI54 55 aa3.71□□□□□ -1.82
TRAPPC1-201ENST00000303731 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
TRAPPC1-201ENST00000303731 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
TRAPPC1-201ENST00000303731 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
TRAPPC1-201ENST00000303731 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
TRAPPC1-201ENST00000303731 KTN1-AS1Q86SY8 53 aa3.54□□□□□ -1.84
TRAPPC1-201ENST00000303731 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
TRAPPC1-201ENST00000303731 LUZP6Q538Z0 58 aa3.36□□□□□ -1.87
TRAPPC1-201ENST00000303731 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
TRAPPC1-201ENST00000303731 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
TRAPPC1-201ENST00000303731 NDUFAF8A1L188 74 aa3.09□□□□□ -1.91
TRAPPC1-201ENST00000303731 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
TRAPPC1-201ENST00000303731 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
TRAPPC1-201ENST00000303731 PRM1P04553 51 aa2.53□□□□□ -2
TRAPPC1-201ENST00000303731 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
TRAPPC1-201ENST00000303731 INE1O15225 51 aa2.25□□□□□ -2.05
TRAPPC1-201ENST00000303731 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 53.5 ms