RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 KRTAP4-3Q9BYR4 195 aa5.5□□□□□ -1.53
CHAF1A-201ENST00000301280 SYNE2Q8WXH0 6885 aaKnown RBP5.44□□□□□ -1.54
CHAF1A-201ENST00000301280 LOC100996750A0A140TA64 210 aa5.43□□□□□ -1.54
CHAF1A-201ENST00000301280 MACF1Q9UPN3 7388 aaKnown RBP5.4□□□□□ -1.54
CHAF1A-201ENST00000301280 KRTAP19-6Q3LI70 58 aa5.37□□□□□ -1.55
CHAF1A-201ENST00000301280 MT1GP13640 62 aa5.35□□□□□ -1.55
CHAF1A-201ENST00000301280 MT1LQ93083 61 aa5.35□□□□□ -1.55
CHAF1A-201ENST00000301280 MT1EP04732 61 aa5.34□□□□□ -1.55
CHAF1A-201ENST00000301280 SPRR2FQ96RM1 72 aa5.32□□□□□ -1.56
CHAF1A-201ENST00000301280 KRTAP2-3P0C7H8 128 aa5.26□□□□□ -1.57
CHAF1A-201ENST00000301280 KRTAP2-4Q9BYR9 128 aa5.26□□□□□ -1.57
CHAF1A-201ENST00000301280 KRTAP2-1Q9BYU5 128 aa5.26□□□□□ -1.57
CHAF1A-201ENST00000301280 MDN1Q9NU22 5596 aa5.25□□□□□ -1.57
CHAF1A-201ENST00000301280 LCE2DQ5TA82 110 aaPredicted RBP5.17□□□□□ -1.58
CHAF1A-201ENST00000301280 KRTAP19-3Q7Z4W3 81 aa5.04□□□□□ -1.6
CHAF1A-201ENST00000301280 MT1MQ8N339 61 aa5.04□□□□□ -1.6
CHAF1A-201ENST00000301280 LCE3BQ5TA77 95 aa5.03□□□□□ -1.6
CHAF1A-201ENST00000301280 KRTAP4-9Q9BYQ8 210 aa4.97□□□□□ -1.61
CHAF1A-201ENST00000301280 KRTAP9-2Q9BYQ4 174 aa4.95□□□□□ -1.62
CHAF1A-201ENST00000301280 LCE5AQ5TCM9 118 aa4.88□□□□□ -1.63
CHAF1A-201ENST00000301280 KRTAP12-4P60329 112 aa4.81□□□□□ -1.64
CHAF1A-201ENST00000301280 SPRR2EP22531 72 aa4.79□□□□□ -1.64
CHAF1A-201ENST00000301280 SPRR2BP35325 72 aa4.79□□□□□ -1.64
CHAF1A-201ENST00000301280 SPRR2AP35326 72 aa4.79□□□□□ -1.64
CHAF1A-201ENST00000301280 KRTAP6-1Q3LI64 71 aa4.67□□□□□ -1.66
CHAF1A-201ENST00000301280 KRTAP9-6A0A140TA67 174 aa4.65□□□□□ -1.66
CHAF1A-201ENST00000301280 KRTAP5-9P26371 169 aa4.64□□□□□ -1.67
CHAF1A-201ENST00000301280 LCE1AQ5T7P2 110 aa4.62□□□□□ -1.67
CHAF1A-201ENST00000301280 KRTAP5-5Q701N2 237 aaPredicted RBP4.56□□□□□ -1.68
CHAF1A-201ENST00000301280 SPRR2DP22532 72 aa4.55□□□□□ -1.68
CHAF1A-201ENST00000301280 MT1AP04731 61 aa4.54□□□□□ -1.68
CHAF1A-201ENST00000301280 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
CHAF1A-201ENST00000301280 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.41□□□□□ -1.7
CHAF1A-201ENST00000301280 KRTAP9-7A8MTY7 169 aa4.36□□□□□ -1.71
CHAF1A-201ENST00000301280 LCE3EQ5T5B0 92 aa4.32□□□□□ -1.72
CHAF1A-201ENST00000301280 MT4P47944 62 aa4.3□□□□□ -1.72
CHAF1A-201ENST00000301280 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
CHAF1A-201ENST00000301280 PRM1P04553 51 aa4.25□□□□□ -1.73
CHAF1A-201ENST00000301280 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
CHAF1A-201ENST00000301280 KRTAP6-3Q3LI67 103 aa4.21□□□□□ -1.74
CHAF1A-201ENST00000301280 NEBP20929 6669 aa4.11□□□□□ -1.75
CHAF1A-201ENST00000301280 KRTAP4-6Q9BYQ5 205 aa4.09□□□□□ -1.75
CHAF1A-201ENST00000301280 MT3P25713 68 aa4.06□□□□□ -1.76
CHAF1A-201ENST00000301280 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
CHAF1A-201ENST00000301280 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
CHAF1A-201ENST00000301280 HMCN1Q96RW7 5635 aa3.92□□□□□ -1.78
CHAF1A-201ENST00000301280 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
CHAF1A-201ENST00000301280 LCE1DQ5T752 114 aa3.87□□□□□ -1.79
CHAF1A-201ENST00000301280 KRTAP5-2Q701N4 177 aa3.81□□□□□ -1.8
CHAF1A-201ENST00000301280 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
CHAF1A-201ENST00000301280 MUC19Q7Z5P9 8384 aa3.78□□□□□ -1.8
CHAF1A-201ENST00000301280 LCE4AQ5TA78 99 aa3.71□□□□□ -1.82
CHAF1A-201ENST00000301280 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
CHAF1A-201ENST00000301280 KRTAP20-2Q3LI61 65 aa3.71□□□□□ -1.82
CHAF1A-201ENST00000301280 KRTAP20-1Q3LI63 56 aa3.68□□□□□ -1.82
CHAF1A-201ENST00000301280 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
CHAF1A-201ENST00000301280 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
CHAF1A-201ENST00000301280 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
CHAF1A-201ENST00000301280 KRTAP5-10Q6L8G5 202 aa3.29□□□□□ -1.88
CHAF1A-201ENST00000301280 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
CHAF1A-201ENST00000301280 MUC5BQ9HC84 5762 aaPredicted RBP3.27□□□□□ -1.89
CHAF1A-201ENST00000301280 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
CHAF1A-201ENST00000301280 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
CHAF1A-201ENST00000301280 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
CHAF1A-201ENST00000301280 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
CHAF1A-201ENST00000301280 KRTAP4-2Q9BYR5 136 aa3.18□□□□□ -1.9
CHAF1A-201ENST00000301280 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
CHAF1A-201ENST00000301280 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
CHAF1A-201ENST00000301280 KRTAP5-7Q6L8G8 165 aa3.08□□□□□ -1.92
CHAF1A-201ENST00000301280 KRTAP5-8O75690 187 aa3.03□□□□□ -1.92
CHAF1A-201ENST00000301280 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
CHAF1A-201ENST00000301280 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.97
CHAF1A-201ENST00000301280 KRTAP9-9Q9BYP9 154 aa2.65□□□□□ -1.99
CHAF1A-201ENST00000301280 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
CHAF1A-201ENST00000301280 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
CHAF1A-201ENST00000301280 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
CHAF1A-201ENST00000301280 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 189.4 ms