RNA–Protein interactions for RNA: ENST00000301050.6

CACNB3-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNB3, Length 2,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-201ENST00000301050 MT1LQ93083 61 aa5.3□□□□□ -1.56
CACNB3-201ENST00000301050 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
CACNB3-201ENST00000301050 KRTAP9-2Q9BYQ4 174 aa5.18□□□□□ -1.58
CACNB3-201ENST00000301050 KRTAP12-4P60329 112 aa5.16□□□□□ -1.58
CACNB3-201ENST00000301050 MUC12Q9UKN1 5478 aa5.13□□□□□ -1.59
CACNB3-201ENST00000301050 MACF1Q9UPN3 7388 aaKnown RBP5.13□□□□□ -1.59
CACNB3-201ENST00000301050 KRTAP4-3Q9BYR4 195 aa5.08□□□□□ -1.6
CACNB3-201ENST00000301050 KRTAP19-3Q7Z4W3 81 aa5.07□□□□□ -1.6
CACNB3-201ENST00000301050 SPRR2FQ96RM1 72 aa5.07□□□□□ -1.6
CACNB3-201ENST00000301050 LOC100996750A0A140TA64 210 aa5.05□□□□□ -1.6
CACNB3-201ENST00000301050 MT1MQ8N339 61 aa5.03□□□□□ -1.6
CACNB3-201ENST00000301050 CRCT1Q9UGL9 99 aa5.03□□□□□ -1.6
CACNB3-201ENST00000301050 MT1GP13640 62 aa5.01□□□□□ -1.61
CACNB3-201ENST00000301050 SYNE2Q8WXH0 6885 aaKnown RBP4.99□□□□□ -1.61
CACNB3-201ENST00000301050 LCE5AQ5TCM9 118 aa4.93□□□□□ -1.62
CACNB3-201ENST00000301050 DSTQ03001 7570 aaKnown RBP4.83□□□□□ -1.64
CACNB3-201ENST00000301050 KRTAP5-9P26371 169 aa4.81□□□□□ -1.64
CACNB3-201ENST00000301050 MDN1Q9NU22 5596 aa4.8□□□□□ -1.64
CACNB3-201ENST00000301050 LCE1AQ5T7P2 110 aa4.77□□□□□ -1.65
CACNB3-201ENST00000301050 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
CACNB3-201ENST00000301050 SPRR2EP22531 72 aa4.72□□□□□ -1.65
CACNB3-201ENST00000301050 SPRR2BP35325 72 aa4.72□□□□□ -1.65
CACNB3-201ENST00000301050 SPRR2AP35326 72 aa4.72□□□□□ -1.65
CACNB3-201ENST00000301050 LCE3BQ5TA77 95 aa4.71□□□□□ -1.66
CACNB3-201ENST00000301050 KRTAP9-7A8MTY7 169 aa4.65□□□□□ -1.66
CACNB3-201ENST00000301050 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.65□□□□□ -1.67
CACNB3-201ENST00000301050 PRM1P04553 51 aa4.64□□□□□ -1.67
CACNB3-201ENST00000301050 MT1AP04731 61 aa4.62□□□□□ -1.67
CACNB3-201ENST00000301050 KRTAP9-6A0A140TA67 174 aa4.61□□□□□ -1.67
CACNB3-201ENST00000301050 KRTAP5-5Q701N2 237 aaPredicted RBP4.61□□□□□ -1.67
CACNB3-201ENST00000301050 KRTAP6-3Q3LI67 103 aa4.58□□□□□ -1.68
CACNB3-201ENST00000301050 SYNE1Q8NF91 8797 aaKnown RBP4.57□□□□□ -1.68
CACNB3-201ENST00000301050 LCE3DQ9BYE3 92 aa4.57□□□□□ -1.68
CACNB3-201ENST00000301050 LCE3EQ5T5B0 92 aa4.56□□□□□ -1.68
CACNB3-201ENST00000301050 SPRR2DP22532 72 aa4.53□□□□□ -1.68
CACNB3-201ENST00000301050 KRTAP6-1Q3LI64 71 aa4.51□□□□□ -1.69
CACNB3-201ENST00000301050 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
CACNB3-201ENST00000301050 NEBP20929 6669 aa4.31□□□□□ -1.72
CACNB3-201ENST00000301050 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.73
CACNB3-201ENST00000301050 KRTAP9-4Q9BYQ2 154 aa4.22□□□□□ -1.73
CACNB3-201ENST00000301050 OBSCNQ5VST9 7968 aa4.22□□□□□ -1.73
CACNB3-201ENST00000301050 KRTAP5-4Q6L8H1 288 aa4.08□□□□□ -1.76
CACNB3-201ENST00000301050 MT3P25713 68 aa4.01□□□□□ -1.77
CACNB3-201ENST00000301050 MT4P47944 62 aa3.99□□□□□ -1.77
CACNB3-201ENST00000301050 KRTAP4-6Q9BYQ5 205 aa3.98□□□□□ -1.77
CACNB3-201ENST00000301050 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
CACNB3-201ENST00000301050 LCE4AQ5TA78 99 aa3.91□□□□□ -1.78
CACNB3-201ENST00000301050 KRTAP20-2Q3LI61 65 aa3.86□□□□□ -1.79
CACNB3-201ENST00000301050 LCE1DQ5T752 114 aa3.81□□□□□ -1.8
CACNB3-201ENST00000301050 HMCN1Q96RW7 5635 aa3.8□□□□□ -1.8
CACNB3-201ENST00000301050 KRTAP20-1Q3LI63 56 aa3.8□□□□□ -1.8
CACNB3-201ENST00000301050 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
CACNB3-201ENST00000301050 KRTAP5-3Q6L8H2 238 aa3.69□□□□□ -1.82
CACNB3-201ENST00000301050 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
CACNB3-201ENST00000301050 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
CACNB3-201ENST00000301050 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
CACNB3-201ENST00000301050 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
CACNB3-201ENST00000301050 KRTAP5-1Q6L8H4 278 aa3.25□□□□□ -1.89
CACNB3-201ENST00000301050 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
CACNB3-201ENST00000301050 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
CACNB3-201ENST00000301050 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
CACNB3-201ENST00000301050 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
CACNB3-201ENST00000301050 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
CACNB3-201ENST00000301050 KRTAP5-8O75690 187 aa3.14□□□□□ -1.91
CACNB3-201ENST00000301050 KRTAP5-7Q6L8G8 165 aa3.01□□□□□ -1.93
CACNB3-201ENST00000301050 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.94
CACNB3-201ENST00000301050 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
CACNB3-201ENST00000301050 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
CACNB3-201ENST00000301050 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
CACNB3-201ENST00000301050 GPR98Q8WXG9 6306 aa2.77□□□□□ -1.97
CACNB3-201ENST00000301050 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
CACNB3-201ENST00000301050 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
CACNB3-201ENST00000301050 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
CACNB3-201ENST00000301050 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
CACNB3-201ENST00000301050 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
CACNB3-201ENST00000301050 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
CACNB3-201ENST00000301050 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 103.7 ms