RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 SSPOA2VEC9 5147 aa4.96□□□□□ -1.62
CDT1-201ENST00000301019 LCE5AQ5TCM9 118 aa4.92□□□□□ -1.62
CDT1-201ENST00000301019 LOC100996750A0A140TA64 210 aa4.92□□□□□ -1.62
CDT1-201ENST00000301019 KRTAP12-4P60329 112 aa4.91□□□□□ -1.62
CDT1-201ENST00000301019 KRTAP19-6Q3LI70 58 aa4.89□□□□□ -1.63
CDT1-201ENST00000301019 KRTAP9-4Q9BYQ2 154 aa4.87□□□□□ -1.63
CDT1-201ENST00000301019 KRTAP9-2Q9BYQ4 174 aa4.86□□□□□ -1.63
CDT1-201ENST00000301019 MUC12Q9UKN1 5478 aa4.84□□□□□ -1.64
CDT1-201ENST00000301019 KRTAP4-3Q9BYR4 195 aa4.82□□□□□ -1.64
CDT1-201ENST00000301019 LCE4AQ5TA78 99 aa4.8□□□□□ -1.64
CDT1-201ENST00000301019 KRTAP19-7Q3SYF9 63 aa4.76□□□□□ -1.65
CDT1-201ENST00000301019 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
CDT1-201ENST00000301019 MT1GP13640 62 aa4.72□□□□□ -1.65
CDT1-201ENST00000301019 KRTAP9-9Q9BYP9 154 aa4.68□□□□□ -1.66
CDT1-201ENST00000301019 KRTAP9-6A0A140TA67 174 aa4.67□□□□□ -1.66
CDT1-201ENST00000301019 LCE1FQ5T754 118 aa4.66□□□□□ -1.66
CDT1-201ENST00000301019 MT1LQ93083 61 aa4.65□□□□□ -1.67
CDT1-201ENST00000301019 KRTAP9-7A8MTY7 169 aa4.62□□□□□ -1.67
CDT1-201ENST00000301019 LCE3BQ5TA77 95 aa4.6□□□□□ -1.67
CDT1-201ENST00000301019 SYNE2Q8WXH0 6885 aaKnown RBP4.59□□□□□ -1.68
CDT1-201ENST00000301019 MACF1Q9UPN3 7388 aaKnown RBP4.55□□□□□ -1.68
CDT1-201ENST00000301019 MT1EP04732 61 aa4.54□□□□□ -1.68
CDT1-201ENST00000301019 KRTAP19-4Q3LI73 84 aa4.54□□□□□ -1.68
CDT1-201ENST00000301019 PRM1P04553 51 aa4.44□□□□□ -1.7
CDT1-201ENST00000301019 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
CDT1-201ENST00000301019 SPRR2FQ96RM1 72 aa4.38□□□□□ -1.71
CDT1-201ENST00000301019 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.33□□□□□ -1.72
CDT1-201ENST00000301019 KRTAP5-9P26371 169 aa4.3□□□□□ -1.72
CDT1-201ENST00000301019 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
CDT1-201ENST00000301019 KRTAP19-3Q7Z4W3 81 aa4.27□□□□□ -1.73
CDT1-201ENST00000301019 MT1MQ8N339 61 aa4.23□□□□□ -1.73
CDT1-201ENST00000301019 LCE3DQ9BYE3 92 aa4.23□□□□□ -1.73
CDT1-201ENST00000301019 MDN1Q9NU22 5596 aa4.22□□□□□ -1.73
CDT1-201ENST00000301019 KRTAP6-3Q3LI67 103 aa4.21□□□□□ -1.73
CDT1-201ENST00000301019 LCE3EQ5T5B0 92 aa4.21□□□□□ -1.73
CDT1-201ENST00000301019 LCE1AQ5T7P2 110 aa4.18□□□□□ -1.74
CDT1-201ENST00000301019 KRTAP5-5Q701N2 237 aaPredicted RBP4.18□□□□□ -1.74
CDT1-201ENST00000301019 SPRR2EP22531 72 aa4.14□□□□□ -1.75
CDT1-201ENST00000301019 SPRR2BP35325 72 aa4.14□□□□□ -1.75
CDT1-201ENST00000301019 SPRR2AP35326 72 aa4.14□□□□□ -1.75
CDT1-201ENST00000301019 KRTAP6-1Q3LI64 71 aa4.11□□□□□ -1.75
CDT1-201ENST00000301019 KRTAP6-2Q3LI66 62 aa4.06□□□□□ -1.76
CDT1-201ENST00000301019 LCE1DQ5T752 114 aa4.03□□□□□ -1.76
CDT1-201ENST00000301019 SPRR2DP22532 72 aa3.99□□□□□ -1.77
CDT1-201ENST00000301019 NEBP20929 6669 aa3.96□□□□□ -1.78
CDT1-201ENST00000301019 MT1AP04731 61 aa3.89□□□□□ -1.79
CDT1-201ENST00000301019 MT3P25713 68 aa3.89□□□□□ -1.79
CDT1-201ENST00000301019 MUC19Q7Z5P9 8384 aa3.87□□□□□ -1.79
CDT1-201ENST00000301019 KRTAP20-1Q3LI63 56 aa3.65□□□□□ -1.82
CDT1-201ENST00000301019 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.84
CDT1-201ENST00000301019 KRTAP4-12Q9BQ66 201 aa3.55□□□□□ -1.84
CDT1-201ENST00000301019 MT4P47944 62 aa3.49□□□□□ -1.85
CDT1-201ENST00000301019 KRTAP4-6Q9BYQ5 205 aa3.46□□□□□ -1.86
CDT1-201ENST00000301019 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
CDT1-201ENST00000301019 HMCN1Q96RW7 5635 aa3.38□□□□□ -1.87
CDT1-201ENST00000301019 KRTAP20-2Q3LI61 65 aa3.37□□□□□ -1.87
CDT1-201ENST00000301019 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
CDT1-201ENST00000301019 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
CDT1-201ENST00000301019 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
CDT1-201ENST00000301019 KRTAP5-3Q6L8H2 238 aa3.24□□□□□ -1.89
CDT1-201ENST00000301019 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
CDT1-201ENST00000301019 AHNAK2Q8IVF2 5795 aa2.95□□□□□ -1.94
CDT1-201ENST00000301019 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.95
CDT1-201ENST00000301019 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
CDT1-201ENST00000301019 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
CDT1-201ENST00000301019 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
CDT1-201ENST00000301019 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
CDT1-201ENST00000301019 KRTAP4-2Q9BYR5 136 aa2.72□□□□□ -1.97
CDT1-201ENST00000301019 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
CDT1-201ENST00000301019 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
CDT1-201ENST00000301019 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
CDT1-201ENST00000301019 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
CDT1-201ENST00000301019 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
CDT1-201ENST00000301019 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
CDT1-201ENST00000301019 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
CDT1-201ENST00000301019 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
CDT1-201ENST00000301019 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 100.5 ms