RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 KRTAP12-4P60329 112 aa4.23□□□□□ -1.73
TVP23A-201ENST00000299866 KRTAP4-3Q9BYR4 195 aa4.23□□□□□ -1.73
TVP23A-201ENST00000299866 CRCT1Q9UGL9 99 aa4.22□□□□□ -1.73
TVP23A-201ENST00000299866 KRTAP19-4Q3LI73 84 aa4.22□□□□□ -1.73
TVP23A-201ENST00000299866 MT1GP13640 62 aa4.19□□□□□ -1.74
TVP23A-201ENST00000299866 MUC12Q9UKN1 5478 aa4.02□□□□□ -1.77
TVP23A-201ENST00000299866 MT1MQ8N339 61 aa4.01□□□□□ -1.77
TVP23A-201ENST00000299866 DSTQ03001 7570 aaKnown RBP4.01□□□□□ -1.77
TVP23A-201ENST00000299866 FCGBPQ9Y6R7 5405 aaPredicted RBP4□□□□□ -1.77
TVP23A-201ENST00000299866 SSPOA2VEC9 5147 aa4□□□□□ -1.77
TVP23A-201ENST00000299866 KRTAP4-9Q9BYQ8 210 aa4□□□□□ -1.77
TVP23A-201ENST00000299866 LCE3BQ5TA77 95 aa3.99□□□□□ -1.77
TVP23A-201ENST00000299866 SYNE1Q8NF91 8797 aaKnown RBP3.96□□□□□ -1.78
TVP23A-201ENST00000299866 KRTAP19-3Q7Z4W3 81 aa3.94□□□□□ -1.78
TVP23A-201ENST00000299866 KRTAP19-6Q3LI70 58 aa3.85□□□□□ -1.79
TVP23A-201ENST00000299866 KRTAP9-2Q9BYQ4 174 aa3.84□□□□□ -1.79
TVP23A-201ENST00000299866 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
TVP23A-201ENST00000299866 PRM1P04553 51 aa3.79□□□□□ -1.8
TVP23A-201ENST00000299866 LCE3DQ9BYE3 92 aa3.79□□□□□ -1.8
TVP23A-201ENST00000299866 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
TVP23A-201ENST00000299866 MT1AP04731 61 aa3.75□□□□□ -1.81
TVP23A-201ENST00000299866 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
TVP23A-201ENST00000299866 LCE5AQ5TCM9 118 aa3.74□□□□□ -1.81
TVP23A-201ENST00000299866 KRTAP5-5Q701N2 237 aaPredicted RBP3.73□□□□□ -1.81
TVP23A-201ENST00000299866 SPRR2FQ96RM1 72 aa3.72□□□□□ -1.81
TVP23A-201ENST00000299866 SYNE2Q8WXH0 6885 aaKnown RBP3.64□□□□□ -1.83
TVP23A-201ENST00000299866 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
TVP23A-201ENST00000299866 KRTAP9-6A0A140TA67 174 aa3.49□□□□□ -1.85
TVP23A-201ENST00000299866 MACF1Q9UPN3 7388 aaKnown RBP3.49□□□□□ -1.85
TVP23A-201ENST00000299866 KRTAP6-3Q3LI67 103 aa3.47□□□□□ -1.85
TVP23A-201ENST00000299866 MDN1Q9NU22 5596 aa3.46□□□□□ -1.86
TVP23A-201ENST00000299866 KRTAP9-4Q9BYQ2 154 aa3.38□□□□□ -1.87
TVP23A-201ENST00000299866 LCE1AQ5T7P2 110 aa3.35□□□□□ -1.87
TVP23A-201ENST00000299866 KRTAP2-2Q9BYT5 123 aa3.34□□□□□ -1.87
TVP23A-201ENST00000299866 SPRR2EP22531 72 aa3.26□□□□□ -1.89
TVP23A-201ENST00000299866 SPRR2BP35325 72 aa3.26□□□□□ -1.89
TVP23A-201ENST00000299866 SPRR2AP35326 72 aa3.26□□□□□ -1.89
TVP23A-201ENST00000299866 MT3P25713 68 aa3.25□□□□□ -1.89
TVP23A-201ENST00000299866 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
TVP23A-201ENST00000299866 LCE4AQ5TA78 99 aa3.15□□□□□ -1.9
TVP23A-201ENST00000299866 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
TVP23A-201ENST00000299866 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
TVP23A-201ENST00000299866 SPRR2DP22532 72 aa3.09□□□□□ -1.91
TVP23A-201ENST00000299866 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.04□□□□□ -1.92
TVP23A-201ENST00000299866 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
TVP23A-201ENST00000299866 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
TVP23A-201ENST00000299866 LCE1DQ5T752 114 aa2.95□□□□□ -1.94
TVP23A-201ENST00000299866 KRTAP4-11Q9BYQ6 195 aa2.87□□□□□ -1.95
TVP23A-201ENST00000299866 KRTAP4-6Q9BYQ5 205 aa2.85□□□□□ -1.95
TVP23A-201ENST00000299866 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
TVP23A-201ENST00000299866 MT4P47944 62 aa2.83□□□□□ -1.96
TVP23A-201ENST00000299866 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
TVP23A-201ENST00000299866 NEBP20929 6669 aa2.74□□□□□ -1.97
TVP23A-201ENST00000299866 LCE1BQ5T7P3 118 aa2.71□□□□□ -1.98
TVP23A-201ENST00000299866 GPR98Q8WXG9 6306 aa2.71□□□□□ -1.98
TVP23A-201ENST00000299866 KRTAP20-2Q3LI61 65 aa2.7□□□□□ -1.98
TVP23A-201ENST00000299866 KRTAP5-10Q6L8G5 202 aa2.69□□□□□ -1.98
TVP23A-201ENST00000299866 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
TVP23A-201ENST00000299866 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
TVP23A-201ENST00000299866 KRTAP4-12Q9BQ66 201 aa2.57□□□□□ -2
TVP23A-201ENST00000299866 KRTAP5-1Q6L8H4 278 aa2.53□□□□□ -2
TVP23A-201ENST00000299866 KRTAP20-1Q3LI63 56 aa2.52□□□□□ -2.01
TVP23A-201ENST00000299866 KRTAP5-3Q6L8H2 238 aa2.5□□□□□ -2.01
TVP23A-201ENST00000299866 KRTAP4-2Q9BYR5 136 aa2.42□□□□□ -2.02
TVP23A-201ENST00000299866 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
TVP23A-201ENST00000299866 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
TVP23A-201ENST00000299866 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
TVP23A-201ENST00000299866 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
TVP23A-201ENST00000299866 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
TVP23A-201ENST00000299866 AHNAK2Q8IVF2 5795 aa2.05□□□□□ -2.08
TVP23A-201ENST00000299866 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
TVP23A-201ENST00000299866 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
TVP23A-201ENST00000299866 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
TVP23A-201ENST00000299866 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.1
TVP23A-201ENST00000299866 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
TVP23A-201ENST00000299866 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
TVP23A-201ENST00000299866 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 33.9 ms