RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 MT1GP13640 62 aa5.89□□□□□ -1.47
CHRNA5-201ENST00000299565 LOC100996750A0A140TA64 210 aa5.88□□□□□ -1.47
CHRNA5-201ENST00000299565 MT1LQ93083 61 aa5.88□□□□□ -1.47
CHRNA5-201ENST00000299565 MT1EP04732 61 aa5.84□□□□□ -1.47
CHRNA5-201ENST00000299565 SPRR2FQ96RM1 72 aa5.74□□□□□ -1.49
CHRNA5-201ENST00000299565 SYNE2Q8WXH0 6885 aaKnown RBP5.68□□□□□ -1.5
CHRNA5-201ENST00000299565 LCE3BQ5TA77 95 aa5.63□□□□□ -1.51
CHRNA5-201ENST00000299565 KRTAP2-3P0C7H8 128 aa5.62□□□□□ -1.51
CHRNA5-201ENST00000299565 KRTAP2-4Q9BYR9 128 aa5.62□□□□□ -1.51
CHRNA5-201ENST00000299565 KRTAP2-1Q9BYU5 128 aa5.62□□□□□ -1.51
CHRNA5-201ENST00000299565 KRTAP12-4P60329 112 aa5.62□□□□□ -1.51
CHRNA5-201ENST00000299565 KRTAP19-3Q7Z4W3 81 aa5.52□□□□□ -1.53
CHRNA5-201ENST00000299565 MT1MQ8N339 61 aa5.51□□□□□ -1.53
CHRNA5-201ENST00000299565 MACF1Q9UPN3 7388 aaKnown RBP5.5□□□□□ -1.53
CHRNA5-201ENST00000299565 KRTAP19-6Q3LI70 58 aa5.48□□□□□ -1.53
CHRNA5-201ENST00000299565 KRTAP4-9Q9BYQ8 210 aa5.46□□□□□ -1.54
CHRNA5-201ENST00000299565 KRTAP19-4Q3LI73 84 aa5.44□□□□□ -1.54
CHRNA5-201ENST00000299565 LCE2DQ5TA82 110 aaPredicted RBP5.44□□□□□ -1.54
CHRNA5-201ENST00000299565 MDN1Q9NU22 5596 aa5.38□□□□□ -1.55
CHRNA5-201ENST00000299565 LCE3DQ9BYE3 92 aa5.15□□□□□ -1.58
CHRNA5-201ENST00000299565 SPRR2EP22531 72 aa5.12□□□□□ -1.59
CHRNA5-201ENST00000299565 SPRR2BP35325 72 aa5.12□□□□□ -1.59
CHRNA5-201ENST00000299565 SPRR2AP35326 72 aa5.12□□□□□ -1.59
CHRNA5-201ENST00000299565 LCE5AQ5TCM9 118 aa5.11□□□□□ -1.59
CHRNA5-201ENST00000299565 KRTAP6-1Q3LI64 71 aa5.1□□□□□ -1.59
CHRNA5-201ENST00000299565 LCE3EQ5T5B0 92 aa5.04□□□□□ -1.6
CHRNA5-201ENST00000299565 PRM1P04553 51 aa4.97□□□□□ -1.61
CHRNA5-201ENST00000299565 KRTAP9-7A8MTY7 169 aa4.93□□□□□ -1.62
CHRNA5-201ENST00000299565 MT1AP04731 61 aa4.89□□□□□ -1.63
CHRNA5-201ENST00000299565 KRTAP9-2Q9BYQ4 174 aa4.86□□□□□ -1.63
CHRNA5-201ENST00000299565 SPRR2DP22532 72 aa4.86□□□□□ -1.63
CHRNA5-201ENST00000299565 LCE1AQ5T7P2 110 aa4.84□□□□□ -1.63
CHRNA5-201ENST00000299565 KRTAP6-2Q3LI66 62 aa4.67□□□□□ -1.66
CHRNA5-201ENST00000299565 MUC19Q7Z5P9 8384 aa4.63□□□□□ -1.67
CHRNA5-201ENST00000299565 MT3P25713 68 aa4.6□□□□□ -1.67
CHRNA5-201ENST00000299565 KRTAP9-4Q9BYQ2 154 aa4.58□□□□□ -1.68
CHRNA5-201ENST00000299565 MT4P47944 62 aa4.54□□□□□ -1.68
CHRNA5-201ENST00000299565 KRTAP5-5Q701N2 237 aaPredicted RBP4.54□□□□□ -1.68
CHRNA5-201ENST00000299565 KRTAP9-6A0A140TA67 174 aa4.44□□□□□ -1.7
CHRNA5-201ENST00000299565 KRTAP5-9P26371 169 aa4.44□□□□□ -1.7
CHRNA5-201ENST00000299565 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.31□□□□□ -1.72
CHRNA5-201ENST00000299565 KRTAP6-3Q3LI67 103 aa4.27□□□□□ -1.73
CHRNA5-201ENST00000299565 LCE1DQ5T752 114 aa4.27□□□□□ -1.73
CHRNA5-201ENST00000299565 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
CHRNA5-201ENST00000299565 LCE1BQ5T7P3 118 aa4.2□□□□□ -1.74
CHRNA5-201ENST00000299565 NEBP20929 6669 aa4.17□□□□□ -1.74
CHRNA5-201ENST00000299565 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
CHRNA5-201ENST00000299565 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
CHRNA5-201ENST00000299565 HMCN1Q96RW7 5635 aa3.97□□□□□ -1.77
CHRNA5-201ENST00000299565 KRTAP20-2Q3LI61 65 aa3.91□□□□□ -1.78
CHRNA5-201ENST00000299565 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
CHRNA5-201ENST00000299565 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.8
CHRNA5-201ENST00000299565 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
CHRNA5-201ENST00000299565 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
CHRNA5-201ENST00000299565 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
CHRNA5-201ENST00000299565 KRTAP5-2Q701N4 177 aa3.57□□□□□ -1.84
CHRNA5-201ENST00000299565 KRTAP20-1Q3LI63 56 aa3.56□□□□□ -1.84
CHRNA5-201ENST00000299565 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
CHRNA5-201ENST00000299565 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
CHRNA5-201ENST00000299565 KRTAP5-10Q6L8G5 202 aa3.39□□□□□ -1.87
CHRNA5-201ENST00000299565 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
CHRNA5-201ENST00000299565 AHNAK2Q8IVF2 5795 aa3.29□□□□□ -1.88
CHRNA5-201ENST00000299565 KRTAP4-12Q9BQ66 201 aa3.25□□□□□ -1.89
CHRNA5-201ENST00000299565 KRTAP4-2Q9BYR5 136 aa3.25□□□□□ -1.89
CHRNA5-201ENST00000299565 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
CHRNA5-201ENST00000299565 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
CHRNA5-201ENST00000299565 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
CHRNA5-201ENST00000299565 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
CHRNA5-201ENST00000299565 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
CHRNA5-201ENST00000299565 KRTAP5-7Q6L8G8 165 aa2.97□□□□□ -1.93
CHRNA5-201ENST00000299565 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
CHRNA5-201ENST00000299565 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
CHRNA5-201ENST00000299565 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
CHRNA5-201ENST00000299565 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
CHRNA5-201ENST00000299565 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
CHRNA5-201ENST00000299565 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
CHRNA5-201ENST00000299565 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 150 ms