RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 SPRR2DP22532 72 aa3.49□□□□□ -1.85
GABRB3-201ENST00000299267 SYNE2Q8WXH0 6885 aaKnown RBP3.48□□□□□ -1.85
GABRB3-201ENST00000299267 LCE2DQ5TA82 110 aaPredicted RBP3.48□□□□□ -1.85
GABRB3-201ENST00000299267 MT1EP04732 61 aa3.47□□□□□ -1.85
GABRB3-201ENST00000299267 MT1LQ93083 61 aa3.45□□□□□ -1.86
GABRB3-201ENST00000299267 KRTAP19-3Q7Z4W3 81 aa3.45□□□□□ -1.86
GABRB3-201ENST00000299267 KRTAP4-3Q9BYR4 195 aa3.43□□□□□ -1.86
GABRB3-201ENST00000299267 INE1O15225 51 aa3.42□□□□□ -1.86
GABRB3-201ENST00000299267 KRTAP9-6A0A140TA67 174 aa3.41□□□□□ -1.86
GABRB3-201ENST00000299267 LCE3BQ5TA77 95 aa3.41□□□□□ -1.86
GABRB3-201ENST00000299267 SSPOA2VEC9 5147 aa3.4□□□□□ -1.87
GABRB3-201ENST00000299267 KRTAP19-7Q3SYF9 63 aa3.39□□□□□ -1.87
GABRB3-201ENST00000299267 MUC12Q9UKN1 5478 aa3.37□□□□□ -1.87
GABRB3-201ENST00000299267 LOC100996750A0A140TA64 210 aa3.36□□□□□ -1.87
GABRB3-201ENST00000299267 MACF1Q9UPN3 7388 aaKnown RBP3.36□□□□□ -1.87
GABRB3-201ENST00000299267 KRTAP19-4Q3LI73 84 aa3.35□□□□□ -1.87
GABRB3-201ENST00000299267 MT1MQ8N339 61 aa3.33□□□□□ -1.88
GABRB3-201ENST00000299267 SPRR5A0A1B0GTR4 108 aa3.31□□□□□ -1.88
GABRB3-201ENST00000299267 KRTAP12-4P60329 112 aa3.25□□□□□ -1.89
GABRB3-201ENST00000299267 KRTAP9-7A8MTY7 169 aa3.22□□□□□ -1.89
GABRB3-201ENST00000299267 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.21□□□□□ -1.89
GABRB3-201ENST00000299267 MT4P47944 62 aa3.21□□□□□ -1.9
GABRB3-201ENST00000299267 KRTAP9-6A8MVA2 160 aa3.12□□□□□ -1.91
GABRB3-201ENST00000299267 LCE1AQ5T7P2 110 aa3.12□□□□□ -1.91
GABRB3-201ENST00000299267 KRTAP6-3Q3LI67 103 aa3.1□□□□□ -1.91
GABRB3-201ENST00000299267 LCE5AQ5TCM9 118 aa3.08□□□□□ -1.92
GABRB3-201ENST00000299267 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
GABRB3-201ENST00000299267 MDN1Q9NU22 5596 aa3.06□□□□□ -1.92
GABRB3-201ENST00000299267 KRTAP4-9Q9BYQ8 210 aa3.05□□□□□ -1.92
GABRB3-201ENST00000299267 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
GABRB3-201ENST00000299267 KRTAP20-1Q3LI63 56 aa2.97□□□□□ -1.93
GABRB3-201ENST00000299267 MT1AP04731 61 aa2.96□□□□□ -1.94
GABRB3-201ENST00000299267 MT3P25713 68 aa2.96□□□□□ -1.94
GABRB3-201ENST00000299267 KRTAP6-1Q3LI64 71 aa2.96□□□□□ -1.94
GABRB3-201ENST00000299267 KRTAP2-3P0C7H8 128 aa2.94□□□□□ -1.94
GABRB3-201ENST00000299267 KRTAP2-4Q9BYR9 128 aa2.94□□□□□ -1.94
GABRB3-201ENST00000299267 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
GABRB3-201ENST00000299267 NEBP20929 6669 aa2.89□□□□□ -1.95
GABRB3-201ENST00000299267 LCE1DQ5T752 114 aa2.87□□□□□ -1.95
GABRB3-201ENST00000299267 KRTAP5-9P26371 169 aa2.87□□□□□ -1.95
GABRB3-201ENST00000299267 KRTAP6-2Q3LI66 62 aa2.86□□□□□ -1.95
GABRB3-201ENST00000299267 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
GABRB3-201ENST00000299267 KRTAP2-2Q9BYT5 123 aa2.85□□□□□ -1.95
GABRB3-201ENST00000299267 KRTAP9-4Q9BYQ2 154 aa2.77□□□□□ -1.97
GABRB3-201ENST00000299267 PRM1P04553 51 aa2.72□□□□□ -1.97
GABRB3-201ENST00000299267 LCE4AQ5TA78 99 aa2.72□□□□□ -1.97
GABRB3-201ENST00000299267 KRTAP4-6Q9BYQ5 205 aa2.71□□□□□ -1.98
GABRB3-201ENST00000299267 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
GABRB3-201ENST00000299267 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
GABRB3-201ENST00000299267 KRTAP20-2Q3LI61 65 aa2.53□□□□□ -2
GABRB3-201ENST00000299267 MUC5ACP98088 5654 aa2.45□□□□□ -2.02
GABRB3-201ENST00000299267 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
GABRB3-201ENST00000299267 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
GABRB3-201ENST00000299267 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.03
GABRB3-201ENST00000299267 KRTAP5-4Q6L8H1 288 aa2.3□□□□□ -2.04
GABRB3-201ENST00000299267 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
GABRB3-201ENST00000299267 LCE1EQ5T753 118 aa2.29□□□□□ -2.04
GABRB3-201ENST00000299267 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
GABRB3-201ENST00000299267 KRTAP4-11Q9BYQ6 195 aa2.28□□□□□ -2.04
GABRB3-201ENST00000299267 KRTAP9-9Q9BYP9 154 aa2.28□□□□□ -2.04
GABRB3-201ENST00000299267 KRTAP4-2Q9BYR5 136 aa2.2□□□□□ -2.06
GABRB3-201ENST00000299267 KRTAP5-3Q6L8H2 238 aa2.19□□□□□ -2.06
GABRB3-201ENST00000299267 AHNAK2Q8IVF2 5795 aa2.18□□□□□ -2.06
GABRB3-201ENST00000299267 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
GABRB3-201ENST00000299267 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
GABRB3-201ENST00000299267 KRTAP5-2Q701N4 177 aa2.02□□□□□ -2.09
GABRB3-201ENST00000299267 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
GABRB3-201ENST00000299267 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
GABRB3-201ENST00000299267 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
GABRB3-201ENST00000299267 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
GABRB3-201ENST00000299267 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
GABRB3-201ENST00000299267 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
GABRB3-201ENST00000299267 KRTAP5-11Q6L8G4 156 aa1.64□□□□□ -2.15
GABRB3-201ENST00000299267 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
GABRB3-201ENST00000299267 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
GABRB3-201ENST00000299267 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
GABRB3-201ENST00000299267 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 67.4 ms