RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 LCE2DQ5TA82 110 aaPredicted RBP6.79□□□□□ -1.32
HPS6-201ENST00000299238 FCGBPQ9Y6R7 5405 aaPredicted RBP6.77□□□□□ -1.33
HPS6-201ENST00000299238 MUC12Q9UKN1 5478 aa6.74□□□□□ -1.33
HPS6-201ENST00000299238 KRTAP4-3Q9BYR4 195 aa6.65□□□□□ -1.34
HPS6-201ENST00000299238 LOC100996750A0A140TA64 210 aa6.61□□□□□ -1.35
HPS6-201ENST00000299238 KRTAP19-3Q7Z4W3 81 aa6.57□□□□□ -1.36
HPS6-201ENST00000299238 DSTQ03001 7570 aaKnown RBP6.55□□□□□ -1.36
HPS6-201ENST00000299238 KRTAP12-4P60329 112 aa6.54□□□□□ -1.36
HPS6-201ENST00000299238 MT1MQ8N339 61 aa6.54□□□□□ -1.36
HPS6-201ENST00000299238 MT1GP13640 62 aa6.51□□□□□ -1.37
HPS6-201ENST00000299238 CRCT1Q9UGL9 99 aa6.46□□□□□ -1.37
HPS6-201ENST00000299238 SPRR2FQ96RM1 72 aa6.44□□□□□ -1.38
HPS6-201ENST00000299238 MACF1Q9UPN3 7388 aaKnown RBP6.42□□□□□ -1.38
HPS6-201ENST00000299238 LCE5AQ5TCM9 118 aa6.37□□□□□ -1.39
HPS6-201ENST00000299238 KRTAP9-2Q9BYQ4 174 aa6.27□□□□□ -1.41
HPS6-201ENST00000299238 SYNE2Q8WXH0 6885 aaKnown RBP6.19□□□□□ -1.42
HPS6-201ENST00000299238 MDN1Q9NU22 5596 aa6.11□□□□□ -1.43
HPS6-201ENST00000299238 SYNE1Q8NF91 8797 aaKnown RBP6.09□□□□□ -1.43
HPS6-201ENST00000299238 KRTAP5-9P26371 169 aa6.08□□□□□ -1.44
HPS6-201ENST00000299238 KRTAP4-9Q9BYQ8 210 aa6.05□□□□□ -1.44
HPS6-201ENST00000299238 LCE1AQ5T7P2 110 aa6.04□□□□□ -1.44
HPS6-201ENST00000299238 LCE3BQ5TA77 95 aa6.03□□□□□ -1.44
HPS6-201ENST00000299238 KRTAP9-7A8MTY7 169 aa5.97□□□□□ -1.45
HPS6-201ENST00000299238 PRM1P04553 51 aa5.92□□□□□ -1.46
HPS6-201ENST00000299238 SPRR2EP22531 72 aa5.92□□□□□ -1.46
HPS6-201ENST00000299238 SPRR2BP35325 72 aa5.92□□□□□ -1.46
HPS6-201ENST00000299238 SPRR2AP35326 72 aa5.92□□□□□ -1.46
HPS6-201ENST00000299238 KRTAP6-1Q3LI64 71 aa5.88□□□□□ -1.47
HPS6-201ENST00000299238 MT1AP04731 61 aa5.84□□□□□ -1.47
HPS6-201ENST00000299238 KRTAP6-3Q3LI67 103 aa5.83□□□□□ -1.48
HPS6-201ENST00000299238 KRTAP5-5Q701N2 237 aaPredicted RBP5.81□□□□□ -1.48
HPS6-201ENST00000299238 KRTAP9-6A0A140TA67 174 aa5.77□□□□□ -1.49
HPS6-201ENST00000299238 SPRR2DP22532 72 aa5.68□□□□□ -1.5
HPS6-201ENST00000299238 LCE3DQ9BYE3 92 aa5.67□□□□□ -1.5
HPS6-201ENST00000299238 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.66□□□□□ -1.5
HPS6-201ENST00000299238 LCE3EQ5T5B0 92 aa5.65□□□□□ -1.5
HPS6-201ENST00000299238 KRTAP2-2Q9BYT5 123 aa5.64□□□□□ -1.51
HPS6-201ENST00000299238 OBSCNQ5VST9 7968 aa5.63□□□□□ -1.51
HPS6-201ENST00000299238 KRTAP9-4Q9BYQ2 154 aa5.5□□□□□ -1.53
HPS6-201ENST00000299238 KRTAP6-2Q3LI66 62 aa5.45□□□□□ -1.54
HPS6-201ENST00000299238 LCE1EQ5T753 118 aa5.37□□□□□ -1.55
HPS6-201ENST00000299238 NEBP20929 6669 aa5.31□□□□□ -1.56
HPS6-201ENST00000299238 MT3P25713 68 aa5.25□□□□□ -1.57
HPS6-201ENST00000299238 KRTAP5-4Q6L8H1 288 aa5.22□□□□□ -1.57
HPS6-201ENST00000299238 LCE1DQ5T752 114 aa5.14□□□□□ -1.59
HPS6-201ENST00000299238 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
HPS6-201ENST00000299238 MT4P47944 62 aa4.98□□□□□ -1.61
HPS6-201ENST00000299238 LCE4AQ5TA78 99 aa4.94□□□□□ -1.62
HPS6-201ENST00000299238 KRTAP20-2Q3LI61 65 aa4.9□□□□□ -1.62
HPS6-201ENST00000299238 KRTAP5-2Q701N4 177 aa4.84□□□□□ -1.63
HPS6-201ENST00000299238 HMCN1Q96RW7 5635 aa4.82□□□□□ -1.64
HPS6-201ENST00000299238 KRTAP20-1Q3LI63 56 aa4.69□□□□□ -1.66
HPS6-201ENST00000299238 KRTAP5-3Q6L8H2 238 aa4.67□□□□□ -1.66
HPS6-201ENST00000299238 MUC5ACP98088 5654 aa4.48□□□□□ -1.69
HPS6-201ENST00000299238 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.7
HPS6-201ENST00000299238 LCE1FQ5T754 118 aa4.38□□□□□ -1.71
HPS6-201ENST00000299238 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
HPS6-201ENST00000299238 MUC19Q7Z5P9 8384 aa4.16□□□□□ -1.74
HPS6-201ENST00000299238 KRTAP5-10Q6L8G5 202 aa4.15□□□□□ -1.75
HPS6-201ENST00000299238 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
HPS6-201ENST00000299238 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
HPS6-201ENST00000299238 LCE1CQ5T751 118 aa4.1□□□□□ -1.75
HPS6-201ENST00000299238 AHNAK2Q8IVF2 5795 aa3.94□□□□□ -1.78
HPS6-201ENST00000299238 KRTAP5-8O75690 187 aa3.92□□□□□ -1.78
HPS6-201ENST00000299238 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
HPS6-201ENST00000299238 KRTAP5-7Q6L8G8 165 aa3.85□□□□□ -1.79
HPS6-201ENST00000299238 KRTAP21-2Q3LI59 83 aa3.81□□□□□ -1.8
HPS6-201ENST00000299238 KRTAP21-1Q3LI58 79 aa3.72□□□□□ -1.81
HPS6-201ENST00000299238 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
HPS6-201ENST00000299238 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
HPS6-201ENST00000299238 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
HPS6-201ENST00000299238 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.86
HPS6-201ENST00000299238 GPR98Q8WXG9 6306 aa3.37□□□□□ -1.87
HPS6-201ENST00000299238 KRTAP9-9Q9BYP9 154 aa3.36□□□□□ -1.87
HPS6-201ENST00000299238 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
HPS6-201ENST00000299238 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
HPS6-201ENST00000299238 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 12.9 ms