RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 KRTAP12-4P60329 112 aa5.02□□□□□ -1.61
SPIDR-201ENST00000297423 SYNE2Q8WXH0 6885 aaKnown RBP4.98□□□□□ -1.61
SPIDR-201ENST00000297423 LOC100996750A0A140TA64 210 aa4.98□□□□□ -1.61
SPIDR-201ENST00000297423 KRTAP2-3P0C7H8 128 aa4.97□□□□□ -1.61
SPIDR-201ENST00000297423 KRTAP19-7Q3SYF9 63 aa4.97□□□□□ -1.61
SPIDR-201ENST00000297423 KRTAP2-4Q9BYR9 128 aa4.97□□□□□ -1.61
SPIDR-201ENST00000297423 KRTAP2-1Q9BYU5 128 aa4.97□□□□□ -1.61
SPIDR-201ENST00000297423 MT1GP13640 62 aa4.94□□□□□ -1.62
SPIDR-201ENST00000297423 KRTAP4-3Q9BYR4 195 aa4.92□□□□□ -1.62
SPIDR-201ENST00000297423 MT1EP04732 61 aa4.91□□□□□ -1.62
SPIDR-201ENST00000297423 SPRR2FQ96RM1 72 aa4.89□□□□□ -1.63
SPIDR-201ENST00000297423 MUC12Q9UKN1 5478 aa4.88□□□□□ -1.63
SPIDR-201ENST00000297423 MT1LQ93083 61 aa4.87□□□□□ -1.63
SPIDR-201ENST00000297423 LCE3BQ5TA77 95 aa4.83□□□□□ -1.64
SPIDR-201ENST00000297423 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
SPIDR-201ENST00000297423 KRTAP4-9Q9BYQ8 210 aa4.74□□□□□ -1.65
SPIDR-201ENST00000297423 KRTAP19-3Q7Z4W3 81 aa4.73□□□□□ -1.65
SPIDR-201ENST00000297423 MACF1Q9UPN3 7388 aaKnown RBP4.71□□□□□ -1.66
SPIDR-201ENST00000297423 MT1MQ8N339 61 aa4.63□□□□□ -1.67
SPIDR-201ENST00000297423 KRTAP9-6A0A140TA67 174 aa4.63□□□□□ -1.67
SPIDR-201ENST00000297423 SPRR2EP22531 72 aa4.58□□□□□ -1.68
SPIDR-201ENST00000297423 SPRR2BP35325 72 aa4.58□□□□□ -1.68
SPIDR-201ENST00000297423 SPRR2AP35326 72 aa4.58□□□□□ -1.68
SPIDR-201ENST00000297423 LCE5AQ5TCM9 118 aa4.54□□□□□ -1.68
SPIDR-201ENST00000297423 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.52□□□□□ -1.69
SPIDR-201ENST00000297423 KRTAP5-9P26371 169 aa4.5□□□□□ -1.69
SPIDR-201ENST00000297423 PRM1P04553 51 aa4.49□□□□□ -1.69
SPIDR-201ENST00000297423 LCE1AQ5T7P2 110 aa4.47□□□□□ -1.69
SPIDR-201ENST00000297423 KRTAP6-3Q3LI67 103 aa4.45□□□□□ -1.7
SPIDR-201ENST00000297423 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
SPIDR-201ENST00000297423 KRTAP9-7A8MTY7 169 aa4.45□□□□□ -1.7
SPIDR-201ENST00000297423 SPRR2DP22532 72 aa4.41□□□□□ -1.7
SPIDR-201ENST00000297423 LCE3EQ5T5B0 92 aa4.38□□□□□ -1.71
SPIDR-201ENST00000297423 MDN1Q9NU22 5596 aa4.34□□□□□ -1.71
SPIDR-201ENST00000297423 KRTAP6-1Q3LI64 71 aa4.25□□□□□ -1.73
SPIDR-201ENST00000297423 MUC19Q7Z5P9 8384 aa4.23□□□□□ -1.73
SPIDR-201ENST00000297423 MT1AP04731 61 aa4.12□□□□□ -1.75
SPIDR-201ENST00000297423 KRTAP6-2Q3LI66 62 aa4.11□□□□□ -1.75
SPIDR-201ENST00000297423 KRTAP5-5Q701N2 237 aaPredicted RBP4.07□□□□□ -1.76
SPIDR-201ENST00000297423 NEBP20929 6669 aa4.05□□□□□ -1.76
SPIDR-201ENST00000297423 MT4P47944 62 aa3.9□□□□□ -1.79
SPIDR-201ENST00000297423 KRTAP9-4Q9BYQ2 154 aa3.9□□□□□ -1.79
SPIDR-201ENST00000297423 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
SPIDR-201ENST00000297423 KRTAP20-1Q3LI63 56 aa3.85□□□□□ -1.79
SPIDR-201ENST00000297423 MT3P25713 68 aa3.81□□□□□ -1.8
SPIDR-201ENST00000297423 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
SPIDR-201ENST00000297423 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
SPIDR-201ENST00000297423 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
SPIDR-201ENST00000297423 LCE1DQ5T752 114 aa3.75□□□□□ -1.81
SPIDR-201ENST00000297423 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
SPIDR-201ENST00000297423 KRTAP4-6Q9BYQ5 205 aa3.72□□□□□ -1.81
SPIDR-201ENST00000297423 KRTAP20-2Q3LI61 65 aa3.62□□□□□ -1.83
SPIDR-201ENST00000297423 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
SPIDR-201ENST00000297423 KRTAP4-11Q9BYQ6 195 aa3.45□□□□□ -1.86
SPIDR-201ENST00000297423 MUC5ACP98088 5654 aa3.42□□□□□ -1.86
SPIDR-201ENST00000297423 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
SPIDR-201ENST00000297423 KRTAP5-3Q6L8H2 238 aa3.38□□□□□ -1.87
SPIDR-201ENST00000297423 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
SPIDR-201ENST00000297423 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
SPIDR-201ENST00000297423 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
SPIDR-201ENST00000297423 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.93
SPIDR-201ENST00000297423 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
SPIDR-201ENST00000297423 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
SPIDR-201ENST00000297423 KRTAP5-10Q6L8G5 202 aa2.91□□□□□ -1.94
SPIDR-201ENST00000297423 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
SPIDR-201ENST00000297423 KRTAP4-12Q9BQ66 201 aa2.89□□□□□ -1.95
SPIDR-201ENST00000297423 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
SPIDR-201ENST00000297423 KRTAP9-9Q9BYP9 154 aa2.78□□□□□ -1.96
SPIDR-201ENST00000297423 KRTAP5-7Q6L8G8 165 aa2.76□□□□□ -1.97
SPIDR-201ENST00000297423 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
SPIDR-201ENST00000297423 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.67□□□□□ -1.98
SPIDR-201ENST00000297423 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
SPIDR-201ENST00000297423 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
SPIDR-201ENST00000297423 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
SPIDR-201ENST00000297423 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
SPIDR-201ENST00000297423 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
SPIDR-201ENST00000297423 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 139.6 ms