RNA–Protein interactions for RNA: ENST00000296315.7

ARHGEF3-201, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-201ENST00000296315 KRTAP2-1Q9BYU5 128 aa3.5□□□□□ -1.85
ARHGEF3-201ENST00000296315 LCE2AQ5TA79 106 aaPredicted RBP3.49□□□□□ -1.85
ARHGEF3-201ENST00000296315 KRTAP19-7Q3SYF9 63 aa3.48□□□□□ -1.85
ARHGEF3-201ENST00000296315 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
ARHGEF3-201ENST00000296315 KRTAP12-4P60329 112 aa3.46□□□□□ -1.86
ARHGEF3-201ENST00000296315 MT1GP13640 62 aa3.45□□□□□ -1.86
ARHGEF3-201ENST00000296315 MT1LQ93083 61 aa3.42□□□□□ -1.86
ARHGEF3-201ENST00000296315 MT1EP04732 61 aa3.37□□□□□ -1.87
ARHGEF3-201ENST00000296315 KRTAP4-9Q9BYQ8 210 aa3.34□□□□□ -1.87
ARHGEF3-201ENST00000296315 LCE3BQ5TA77 95 aa3.33□□□□□ -1.88
ARHGEF3-201ENST00000296315 SYNE2Q8WXH0 6885 aaKnown RBP3.32□□□□□ -1.88
ARHGEF3-201ENST00000296315 MACF1Q9UPN3 7388 aaKnown RBP3.29□□□□□ -1.88
ARHGEF3-201ENST00000296315 SPRR2FQ96RM1 72 aa3.23□□□□□ -1.89
ARHGEF3-201ENST00000296315 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
ARHGEF3-201ENST00000296315 MT1MQ8N339 61 aa3.16□□□□□ -1.9
ARHGEF3-201ENST00000296315 KRTAP19-6Q3LI70 58 aa3.15□□□□□ -1.91
ARHGEF3-201ENST00000296315 LCE2DQ5TA82 110 aaPredicted RBP3.13□□□□□ -1.91
ARHGEF3-201ENST00000296315 KRTAP9-7A8MTY7 169 aa3.13□□□□□ -1.91
ARHGEF3-201ENST00000296315 PRM1P04553 51 aa3.11□□□□□ -1.91
ARHGEF3-201ENST00000296315 KRTAP19-3Q7Z4W3 81 aa3.11□□□□□ -1.91
ARHGEF3-201ENST00000296315 KRTAP19-4Q3LI73 84 aa3.09□□□□□ -1.92
ARHGEF3-201ENST00000296315 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
ARHGEF3-201ENST00000296315 KRTAP9-2Q9BYQ4 174 aa3.05□□□□□ -1.92
ARHGEF3-201ENST00000296315 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
ARHGEF3-201ENST00000296315 KRTAP6-1Q3LI64 71 aa2.99□□□□□ -1.93
ARHGEF3-201ENST00000296315 KRTAP9-6A0A140TA67 174 aa2.94□□□□□ -1.94
ARHGEF3-201ENST00000296315 SPRR2EP22531 72 aa2.92□□□□□ -1.94
ARHGEF3-201ENST00000296315 SPRR2BP35325 72 aa2.92□□□□□ -1.94
ARHGEF3-201ENST00000296315 SPRR2AP35326 72 aa2.92□□□□□ -1.94
ARHGEF3-201ENST00000296315 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
ARHGEF3-201ENST00000296315 LCE5AQ5TCM9 118 aa2.89□□□□□ -1.95
ARHGEF3-201ENST00000296315 KRTAP6-2Q3LI66 62 aa2.87□□□□□ -1.95
ARHGEF3-201ENST00000296315 MT1AP04731 61 aa2.83□□□□□ -1.96
ARHGEF3-201ENST00000296315 LCE1AQ5T7P2 110 aa2.8□□□□□ -1.96
ARHGEF3-201ENST00000296315 SPRR2DP22532 72 aa2.77□□□□□ -1.97
ARHGEF3-201ENST00000296315 KRTAP6-3Q3LI67 103 aa2.74□□□□□ -1.97
ARHGEF3-201ENST00000296315 KRTAP2-2Q9BYT5 123 aa2.65□□□□□ -1.98
ARHGEF3-201ENST00000296315 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.63□□□□□ -1.99
ARHGEF3-201ENST00000296315 KRTAP9-4Q9BYQ2 154 aa2.62□□□□□ -1.99
ARHGEF3-201ENST00000296315 MT4P47944 62 aa2.62□□□□□ -1.99
ARHGEF3-201ENST00000296315 KRTAP5-9P26371 169 aa2.6□□□□□ -1.99
ARHGEF3-201ENST00000296315 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
ARHGEF3-201ENST00000296315 KRTAP4-6Q9BYQ5 205 aa2.6□□□□□ -1.99
ARHGEF3-201ENST00000296315 MT3P25713 68 aa2.59□□□□□ -2
ARHGEF3-201ENST00000296315 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
ARHGEF3-201ENST00000296315 NEBP20929 6669 aa2.48□□□□□ -2.01
ARHGEF3-201ENST00000296315 LCE1DQ5T752 114 aa2.44□□□□□ -2.02
ARHGEF3-201ENST00000296315 KRTAP4-11Q9BYQ6 195 aa2.4□□□□□ -2.02
ARHGEF3-201ENST00000296315 HMCN1Q96RW7 5635 aa2.36□□□□□ -2.03
ARHGEF3-201ENST00000296315 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
ARHGEF3-201ENST00000296315 MUC5ACP98088 5654 aa2.3□□□□□ -2.04
ARHGEF3-201ENST00000296315 KRTAP20-1Q3LI63 56 aa2.3□□□□□ -2.04
ARHGEF3-201ENST00000296315 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
ARHGEF3-201ENST00000296315 KRTAP5-4Q6L8H1 288 aa2.19□□□□□ -2.06
ARHGEF3-201ENST00000296315 LCE4AQ5TA78 99 aa2.15□□□□□ -2.07
ARHGEF3-201ENST00000296315 KRTAP5-3Q6L8H2 238 aa2.1□□□□□ -2.07
ARHGEF3-201ENST00000296315 GPR98Q8WXG9 6306 aa2.08□□□□□ -2.08
ARHGEF3-201ENST00000296315 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
ARHGEF3-201ENST00000296315 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
ARHGEF3-201ENST00000296315 KRTAP5-2Q701N4 177 aa2.01□□□□□ -2.09
ARHGEF3-201ENST00000296315 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
ARHGEF3-201ENST00000296315 AHNAK2Q8IVF2 5795 aa1.96□□□□□ -2.1
ARHGEF3-201ENST00000296315 LCE1FQ5T754 118 aa1.95□□□□□ -2.1
ARHGEF3-201ENST00000296315 KRTAP4-2Q9BYR5 136 aa1.88□□□□□ -2.11
ARHGEF3-201ENST00000296315 KRTAP4-12Q9BQ66 201 aa1.88□□□□□ -2.11
ARHGEF3-201ENST00000296315 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
ARHGEF3-201ENST00000296315 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
ARHGEF3-201ENST00000296315 KRTAP9-9Q9BYP9 154 aa1.77□□□□□ -2.13
ARHGEF3-201ENST00000296315 LCE1CQ5T751 118 aa1.77□□□□□ -2.13
ARHGEF3-201ENST00000296315 KRTAP5-8O75690 187 aa1.76□□□□□ -2.13
ARHGEF3-201ENST00000296315 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
ARHGEF3-201ENST00000296315 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
ARHGEF3-201ENST00000296315 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
ARHGEF3-201ENST00000296315 AHNAKQ09666 5890 aaKnown RBP1.53□□□□□ -2.16
ARHGEF3-201ENST00000296315 KRTAP5-11Q6L8G4 156 aa1.49□□□□□ -2.17
ARHGEF3-201ENST00000296315 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
ARHGEF3-201ENST00000296315 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 171.7 ms