RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 LCE2DQ5TA82 110 aaPredicted RBP5.3□□□□□ -1.56
NCKIPSD-201ENST00000294129 LOC100996750A0A140TA64 210 aa5.28□□□□□ -1.56
NCKIPSD-201ENST00000294129 CRCT1Q9UGL9 99 aa5.25□□□□□ -1.57
NCKIPSD-201ENST00000294129 MACF1Q9UPN3 7388 aaKnown RBP5.23□□□□□ -1.57
NCKIPSD-201ENST00000294129 MT1GP13640 62 aa5.23□□□□□ -1.57
NCKIPSD-201ENST00000294129 KRTAP2-3P0C7H8 128 aa5.22□□□□□ -1.57
NCKIPSD-201ENST00000294129 KRTAP2-4Q9BYR9 128 aa5.22□□□□□ -1.57
NCKIPSD-201ENST00000294129 KRTAP2-1Q9BYU5 128 aa5.22□□□□□ -1.57
NCKIPSD-201ENST00000294129 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
NCKIPSD-201ENST00000294129 KRTAP19-3Q7Z4W3 81 aa5.19□□□□□ -1.58
NCKIPSD-201ENST00000294129 SPRR2FQ96RM1 72 aa5.19□□□□□ -1.58
NCKIPSD-201ENST00000294129 MT1MQ8N339 61 aa5.18□□□□□ -1.58
NCKIPSD-201ENST00000294129 SYNE2Q8WXH0 6885 aaKnown RBP5.11□□□□□ -1.59
NCKIPSD-201ENST00000294129 LCE5AQ5TCM9 118 aa5□□□□□ -1.61
NCKIPSD-201ENST00000294129 MDN1Q9NU22 5596 aa5□□□□□ -1.61
NCKIPSD-201ENST00000294129 KRTAP9-2Q9BYQ4 174 aa4.95□□□□□ -1.62
NCKIPSD-201ENST00000294129 SYNE1Q8NF91 8797 aaKnown RBP4.88□□□□□ -1.63
NCKIPSD-201ENST00000294129 LCE3BQ5TA77 95 aa4.83□□□□□ -1.64
NCKIPSD-201ENST00000294129 LCE1AQ5T7P2 110 aa4.77□□□□□ -1.65
NCKIPSD-201ENST00000294129 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
NCKIPSD-201ENST00000294129 SPRR2EP22531 72 aa4.74□□□□□ -1.65
NCKIPSD-201ENST00000294129 SPRR2BP35325 72 aa4.74□□□□□ -1.65
NCKIPSD-201ENST00000294129 SPRR2AP35326 72 aa4.74□□□□□ -1.65
NCKIPSD-201ENST00000294129 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
NCKIPSD-201ENST00000294129 KRTAP6-1Q3LI64 71 aa4.71□□□□□ -1.66
NCKIPSD-201ENST00000294129 KRTAP5-9P26371 169 aa4.68□□□□□ -1.66
NCKIPSD-201ENST00000294129 MT1AP04731 61 aa4.59□□□□□ -1.68
NCKIPSD-201ENST00000294129 OBSCNQ5VST9 7968 aa4.58□□□□□ -1.68
NCKIPSD-201ENST00000294129 SPRR2DP22532 72 aa4.52□□□□□ -1.69
NCKIPSD-201ENST00000294129 KRTAP5-5Q701N2 237 aaPredicted RBP4.51□□□□□ -1.69
NCKIPSD-201ENST00000294129 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.44□□□□□ -1.7
NCKIPSD-201ENST00000294129 LCE3DQ9BYE3 92 aa4.42□□□□□ -1.7
NCKIPSD-201ENST00000294129 KRTAP6-3Q3LI67 103 aa4.36□□□□□ -1.71
NCKIPSD-201ENST00000294129 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
NCKIPSD-201ENST00000294129 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
NCKIPSD-201ENST00000294129 KRTAP9-6A0A140TA67 174 aa4.28□□□□□ -1.72
NCKIPSD-201ENST00000294129 KRTAP9-7A8MTY7 169 aa4.27□□□□□ -1.73
NCKIPSD-201ENST00000294129 KRTAP6-2Q3LI66 62 aa4.27□□□□□ -1.73
NCKIPSD-201ENST00000294129 PRM1P04553 51 aa4.21□□□□□ -1.74
NCKIPSD-201ENST00000294129 MT3P25713 68 aa4.15□□□□□ -1.75
NCKIPSD-201ENST00000294129 NEBP20929 6669 aa4.14□□□□□ -1.75
NCKIPSD-201ENST00000294129 MT4P47944 62 aa4.07□□□□□ -1.76
NCKIPSD-201ENST00000294129 KRTAP4-6Q9BYQ5 205 aa4.04□□□□□ -1.76
NCKIPSD-201ENST00000294129 KRTAP5-4Q6L8H1 288 aa4□□□□□ -1.77
NCKIPSD-201ENST00000294129 HMCN1Q96RW7 5635 aa3.86□□□□□ -1.79
NCKIPSD-201ENST00000294129 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
NCKIPSD-201ENST00000294129 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
NCKIPSD-201ENST00000294129 LCE1DQ5T752 114 aa3.77□□□□□ -1.81
NCKIPSD-201ENST00000294129 KRTAP5-2Q701N4 177 aa3.71□□□□□ -1.82
NCKIPSD-201ENST00000294129 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
NCKIPSD-201ENST00000294129 KRTAP20-1Q3LI63 56 aa3.61□□□□□ -1.83
NCKIPSD-201ENST00000294129 KRTAP5-3Q6L8H2 238 aa3.61□□□□□ -1.83
NCKIPSD-201ENST00000294129 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
NCKIPSD-201ENST00000294129 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
NCKIPSD-201ENST00000294129 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
NCKIPSD-201ENST00000294129 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
NCKIPSD-201ENST00000294129 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
NCKIPSD-201ENST00000294129 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
NCKIPSD-201ENST00000294129 KRTAP5-10Q6L8G5 202 aa3.21□□□□□ -1.9
NCKIPSD-201ENST00000294129 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
NCKIPSD-201ENST00000294129 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
NCKIPSD-201ENST00000294129 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
NCKIPSD-201ENST00000294129 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
NCKIPSD-201ENST00000294129 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
NCKIPSD-201ENST00000294129 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
NCKIPSD-201ENST00000294129 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
NCKIPSD-201ENST00000294129 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
NCKIPSD-201ENST00000294129 KRTAP5-7Q6L8G8 165 aa2.87□□□□□ -1.95
NCKIPSD-201ENST00000294129 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
NCKIPSD-201ENST00000294129 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
NCKIPSD-201ENST00000294129 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
NCKIPSD-201ENST00000294129 GPR98Q8WXG9 6306 aa2.69□□□□□ -1.98
NCKIPSD-201ENST00000294129 KRTAP9-9Q9BYP9 154 aa2.65□□□□□ -1.99
NCKIPSD-201ENST00000294129 KRTAP21-1Q3LI58 79 aa2.59□□□□□ -1.99
NCKIPSD-201ENST00000294129 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
NCKIPSD-201ENST00000294129 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
NCKIPSD-201ENST00000294129 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms