RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 KRTAP9-6A8MVA2 160 aa6.95□□□□□ -1.3
CXCL16-201ENST00000293778 FCGBPQ9Y6R7 5405 aaPredicted RBP6.92□□□□□ -1.3
CXCL16-201ENST00000293778 MACF1Q9UPN3 7388 aaKnown RBP6.67□□□□□ -1.34
CXCL16-201ENST00000293778 KRTAP19-3Q7Z4W3 81 aa6.65□□□□□ -1.35
CXCL16-201ENST00000293778 KRTAP2-3P0C7H8 128 aa6.63□□□□□ -1.35
CXCL16-201ENST00000293778 KRTAP2-4Q9BYR9 128 aa6.63□□□□□ -1.35
CXCL16-201ENST00000293778 KRTAP2-1Q9BYU5 128 aa6.63□□□□□ -1.35
CXCL16-201ENST00000293778 MT1GP13640 62 aa6.62□□□□□ -1.35
CXCL16-201ENST00000293778 MT1MQ8N339 61 aa6.61□□□□□ -1.35
CXCL16-201ENST00000293778 KRTAP4-3Q9BYR4 195 aa6.61□□□□□ -1.35
CXCL16-201ENST00000293778 SYNE2Q8WXH0 6885 aaKnown RBP6.59□□□□□ -1.35
CXCL16-201ENST00000293778 MUC12Q9UKN1 5478 aa6.57□□□□□ -1.36
CXCL16-201ENST00000293778 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.56□□□□□ -1.36
CXCL16-201ENST00000293778 SPRR2FQ96RM1 72 aa6.52□□□□□ -1.37
CXCL16-201ENST00000293778 LOC100996750A0A140TA64 210 aa6.51□□□□□ -1.37
CXCL16-201ENST00000293778 LCE5AQ5TCM9 118 aa6.45□□□□□ -1.38
CXCL16-201ENST00000293778 KRTAP9-7A8MTY7 169 aa6.33□□□□□ -1.4
CXCL16-201ENST00000293778 KRTAP6-3Q3LI67 103 aa6.23□□□□□ -1.41
CXCL16-201ENST00000293778 DSTQ03001 7570 aaKnown RBP6.18□□□□□ -1.42
CXCL16-201ENST00000293778 KRTAP5-9P26371 169 aa6.18□□□□□ -1.42
CXCL16-201ENST00000293778 LCE1AQ5T7P2 110 aa6.13□□□□□ -1.43
CXCL16-201ENST00000293778 MDN1Q9NU22 5596 aa6.1□□□□□ -1.43
CXCL16-201ENST00000293778 NEBP20929 6669 aa6.04□□□□□ -1.44
CXCL16-201ENST00000293778 SPRR2EP22531 72 aa6.02□□□□□ -1.45
CXCL16-201ENST00000293778 SPRR2BP35325 72 aa6.02□□□□□ -1.45
CXCL16-201ENST00000293778 SPRR2AP35326 72 aa6.02□□□□□ -1.45
CXCL16-201ENST00000293778 LCE3BQ5TA77 95 aa5.94□□□□□ -1.46
CXCL16-201ENST00000293778 KRTAP6-1Q3LI64 71 aa5.92□□□□□ -1.46
CXCL16-201ENST00000293778 MT1AP04731 61 aa5.91□□□□□ -1.46
CXCL16-201ENST00000293778 KRTAP5-5Q701N2 237 aaPredicted RBP5.87□□□□□ -1.47
CXCL16-201ENST00000293778 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
CXCL16-201ENST00000293778 SPRR2DP22532 72 aa5.77□□□□□ -1.49
CXCL16-201ENST00000293778 KRTAP4-9Q9BYQ8 210 aa5.74□□□□□ -1.49
CXCL16-201ENST00000293778 SYNE1Q8NF91 8797 aaKnown RBP5.63□□□□□ -1.51
CXCL16-201ENST00000293778 KRTAP9-4Q9BYQ2 154 aa5.58□□□□□ -1.52
CXCL16-201ENST00000293778 KRTAP20-1Q3LI63 56 aa5.56□□□□□ -1.52
CXCL16-201ENST00000293778 LCE3DQ9BYE3 92 aa5.56□□□□□ -1.52
CXCL16-201ENST00000293778 KRTAP4-6Q9BYQ5 205 aa5.54□□□□□ -1.52
CXCL16-201ENST00000293778 LCE3EQ5T5B0 92 aa5.46□□□□□ -1.54
CXCL16-201ENST00000293778 KRTAP2-2Q9BYT5 123 aa5.38□□□□□ -1.55
CXCL16-201ENST00000293778 KRTAP6-2Q3LI66 62 aa5.36□□□□□ -1.55
CXCL16-201ENST00000293778 MT3P25713 68 aa5.33□□□□□ -1.56
CXCL16-201ENST00000293778 KRTAP5-4Q6L8H1 288 aa5.3□□□□□ -1.56
CXCL16-201ENST00000293778 PRM1P04553 51 aa5.08□□□□□ -1.6
CXCL16-201ENST00000293778 MT4P47944 62 aa5.05□□□□□ -1.6
CXCL16-201ENST00000293778 LCE4AQ5TA78 99 aa5.04□□□□□ -1.6
CXCL16-201ENST00000293778 OBSCNQ5VST9 7968 aa4.99□□□□□ -1.61
CXCL16-201ENST00000293778 KRTAP20-2Q3LI61 65 aa4.97□□□□□ -1.61
CXCL16-201ENST00000293778 LCE1DQ5T752 114 aa4.97□□□□□ -1.61
CXCL16-201ENST00000293778 HMCN1Q96RW7 5635 aa4.95□□□□□ -1.62
CXCL16-201ENST00000293778 KRTAP5-2Q701N4 177 aa4.91□□□□□ -1.62
CXCL16-201ENST00000293778 KRTAP5-3Q6L8H2 238 aa4.74□□□□□ -1.65
CXCL16-201ENST00000293778 AHNAK2Q8IVF2 5795 aa4.57□□□□□ -1.68
CXCL16-201ENST00000293778 GPR98Q8WXG9 6306 aa4.51□□□□□ -1.69
CXCL16-201ENST00000293778 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
CXCL16-201ENST00000293778 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.7
CXCL16-201ENST00000293778 MUC5ACP98088 5654 aa4.4□□□□□ -1.71
CXCL16-201ENST00000293778 KRTAP5-10Q6L8G5 202 aa4.35□□□□□ -1.71
CXCL16-201ENST00000293778 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
CXCL16-201ENST00000293778 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
CXCL16-201ENST00000293778 KRTAP4-11Q9BYQ6 195 aa4.22□□□□□ -1.73
CXCL16-201ENST00000293778 KRTAP4-12Q9BQ66 201 aa4.19□□□□□ -1.74
CXCL16-201ENST00000293778 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
CXCL16-201ENST00000293778 LCE1CQ5T751 118 aa4.17□□□□□ -1.74
CXCL16-201ENST00000293778 KRTAP5-8O75690 187 aa4.08□□□□□ -1.76
CXCL16-201ENST00000293778 KRTAP5-7Q6L8G8 165 aa4.07□□□□□ -1.76
CXCL16-201ENST00000293778 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
CXCL16-201ENST00000293778 KRTAP21-2Q3LI59 83 aa3.85□□□□□ -1.79
CXCL16-201ENST00000293778 MUC5BQ9HC84 5762 aaPredicted RBP3.71□□□□□ -1.82
CXCL16-201ENST00000293778 KRTAP5-11Q6L8G4 156 aa3.61□□□□□ -1.83
CXCL16-201ENST00000293778 AHNAKQ09666 5890 aaKnown RBP3.61□□□□□ -1.83
CXCL16-201ENST00000293778 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
CXCL16-201ENST00000293778 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
CXCL16-201ENST00000293778 KRTAP21-1Q3LI58 79 aa3.26□□□□□ -1.89
CXCL16-201ENST00000293778 PHGR1C9JFL3 82 aa3.12□□□□□ -1.91
CXCL16-201ENST00000293778 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
CXCL16-201ENST00000293778 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 155.6 ms