RNA–Protein interactions for RNA: ENST00000293362.7

PSME3-201, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-201ENST00000293362 KRTAP4-7Q9BYR0 210 aa3.7□□□□□ -1.82
PSME3-201ENST00000293362 MACF1Q9UPN3 7388 aaKnown RBP3.69□□□□□ -1.82
PSME3-201ENST00000293362 SYNE2Q8WXH0 6885 aaKnown RBP3.66□□□□□ -1.82
PSME3-201ENST00000293362 SYNE1Q8NF91 8797 aaKnown RBP3.65□□□□□ -1.82
PSME3-201ENST00000293362 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
PSME3-201ENST00000293362 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
PSME3-201ENST00000293362 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
PSME3-201ENST00000293362 KRTAP9-2Q9BYQ4 174 aa3.61□□□□□ -1.83
PSME3-201ENST00000293362 MT1EP04732 61 aa3.6□□□□□ -1.83
PSME3-201ENST00000293362 MT1LQ93083 61 aa3.57□□□□□ -1.84
PSME3-201ENST00000293362 KRTAP9-6A0A140TA67 174 aa3.55□□□□□ -1.84
PSME3-201ENST00000293362 KRTAP9-7A8MTY7 169 aa3.55□□□□□ -1.84
PSME3-201ENST00000293362 KRTAP9-6A8MVA2 160 aa3.55□□□□□ -1.84
PSME3-201ENST00000293362 KRTAP4-3Q9BYR4 195 aa3.53□□□□□ -1.84
PSME3-201ENST00000293362 SPRR2FQ96RM1 72 aa3.52□□□□□ -1.85
PSME3-201ENST00000293362 CRCT1Q9UGL9 99 aa3.51□□□□□ -1.85
PSME3-201ENST00000293362 MDN1Q9NU22 5596 aa3.51□□□□□ -1.85
PSME3-201ENST00000293362 LCE4AQ5TA78 99 aa3.48□□□□□ -1.85
PSME3-201ENST00000293362 LOC100996750A0A140TA64 210 aa3.46□□□□□ -1.86
PSME3-201ENST00000293362 LCE1AQ5T7P2 110 aa3.41□□□□□ -1.86
PSME3-201ENST00000293362 KRTAP19-3Q7Z4W3 81 aa3.41□□□□□ -1.86
PSME3-201ENST00000293362 MT1GP13640 62 aa3.41□□□□□ -1.86
PSME3-201ENST00000293362 MT1MQ8N339 61 aa3.39□□□□□ -1.87
PSME3-201ENST00000293362 MT3P25713 68 aa3.36□□□□□ -1.87
PSME3-201ENST00000293362 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
PSME3-201ENST00000293362 SPRR2EP22531 72 aa3.25□□□□□ -1.89
PSME3-201ENST00000293362 SPRR2BP35325 72 aa3.25□□□□□ -1.89
PSME3-201ENST00000293362 SPRR2AP35326 72 aa3.25□□□□□ -1.89
PSME3-201ENST00000293362 KRTAP5-9P26371 169 aa3.22□□□□□ -1.89
PSME3-201ENST00000293362 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.21□□□□□ -1.9
PSME3-201ENST00000293362 KRTAP2-3P0C7H8 128 aa3.19□□□□□ -1.9
PSME3-201ENST00000293362 KRTAP2-4Q9BYR9 128 aa3.19□□□□□ -1.9
PSME3-201ENST00000293362 KRTAP2-1Q9BYU5 128 aa3.19□□□□□ -1.9
PSME3-201ENST00000293362 KRTAP6-3Q3LI67 103 aa3.18□□□□□ -1.9
PSME3-201ENST00000293362 LCE1DQ5T752 114 aa3.18□□□□□ -1.9
PSME3-201ENST00000293362 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
PSME3-201ENST00000293362 SPRR2DP22532 72 aa3.1□□□□□ -1.91
PSME3-201ENST00000293362 LCE3BQ5TA77 95 aa3.1□□□□□ -1.91
PSME3-201ENST00000293362 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
PSME3-201ENST00000293362 KRTAP4-9Q9BYQ8 210 aa3.06□□□□□ -1.92
PSME3-201ENST00000293362 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
PSME3-201ENST00000293362 NEBP20929 6669 aa2.98□□□□□ -1.93
PSME3-201ENST00000293362 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
PSME3-201ENST00000293362 MT1AP04731 61 aa2.96□□□□□ -1.94
PSME3-201ENST00000293362 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
PSME3-201ENST00000293362 KRTAP4-6Q9BYQ5 205 aa2.91□□□□□ -1.94
PSME3-201ENST00000293362 MT4P47944 62 aa2.82□□□□□ -1.96
PSME3-201ENST00000293362 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
PSME3-201ENST00000293362 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
PSME3-201ENST00000293362 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
PSME3-201ENST00000293362 KRTAP5-4Q6L8H1 288 aa2.71□□□□□ -1.98
PSME3-201ENST00000293362 PRM1P04553 51 aa2.64□□□□□ -1.99
PSME3-201ENST00000293362 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
PSME3-201ENST00000293362 KRTAP20-1Q3LI63 56 aa2.62□□□□□ -1.99
PSME3-201ENST00000293362 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
PSME3-201ENST00000293362 KRTAP5-2Q701N4 177 aa2.48□□□□□ -2.01
PSME3-201ENST00000293362 KRTAP5-3Q6L8H2 238 aa2.47□□□□□ -2.01
PSME3-201ENST00000293362 MUC5ACP98088 5654 aa2.34□□□□□ -2.03
PSME3-201ENST00000293362 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.04
PSME3-201ENST00000293362 KRTAP4-2Q9BYR5 136 aa2.26□□□□□ -2.05
PSME3-201ENST00000293362 KRTAP4-11Q9BYQ6 195 aa2.24□□□□□ -2.05
PSME3-201ENST00000293362 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
PSME3-201ENST00000293362 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
PSME3-201ENST00000293362 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
PSME3-201ENST00000293362 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
PSME3-201ENST00000293362 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
PSME3-201ENST00000293362 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.07
PSME3-201ENST00000293362 GPR98Q8WXG9 6306 aa2.01□□□□□ -2.09
PSME3-201ENST00000293362 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
PSME3-201ENST00000293362 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
PSME3-201ENST00000293362 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
PSME3-201ENST00000293362 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
PSME3-201ENST00000293362 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
PSME3-201ENST00000293362 AHNAKQ09666 5890 aaKnown RBP1.69□□□□□ -2.14
PSME3-201ENST00000293362 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
PSME3-201ENST00000293362 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
PSME3-201ENST00000293362 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 12.6 ms